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FFCP PHASE1:Mm9::chr5:150438847..150438866,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15505
|EntrezGene=15505
|HGNC=
|HGNC=
|MCL_coexpression_id=910
|TSSclassifier=NA
|UniProt=Q61699
|UniProt=Q61699
|association_with_transcript=23bp_to_NM_013559,uc009apx.1,uc009apy.1,uc009apz.1,uc009aqa.1_5end
|association_with_transcript=23bp_to_NM_013559,uc009apx.1,uc009apy.1,uc009apz.1,uc009aqa.1_5end
|cluster_id=chr5:150438847..150438866,-
|description=CAGE_peak_2_at_Hsph1_5end
|description=CAGE_peak_2_at_Hsph1_5end
|id=chr5:150438847..150438866,-
|id=chr5:150438847..150438866,-
|ontology_enrichment_celltype=CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39;CL:0002321!2.36e-07!70;CL:0000220!2.36e-07!70;CL:0000540!4.10e-07!33;CL:0000047!4.10e-07!33;CL:0000031!4.10e-07!33;CL:0000404!4.10e-07!33
|ontology_enrichment_celltype=CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39;CL:0002321!2.36e-07!70;CL:0000220!2.36e-07!70;CL:0000540!4.10e-07!33;CL:0000047!4.10e-07!33;CL:0000031!4.10e-07!33;CL:0000404!4.10e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000393,1.03e-07,39;CL:0000211,1.03e-07,39;CL:0002321,2.36e-07,70;CL:0000540,4.10e-07,33;CL:0000047,4.10e-07,33;CL:0000031,4.10e-07,33;CL:0000404,4.10e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.55e-16!73;UBERON:0005743!1.55e-16!73;UBERON:0000073!2.34e-16!75;UBERON:0001016!2.34e-16!75;UBERON:0000955!5.41e-16!50;UBERON:0006238!5.41e-16!50;UBERON:0000033!9.57e-16!63;UBERON:0002616!1.94e-15!49;UBERON:0001049!2.81e-15!52;UBERON:0005068!2.81e-15!52;UBERON:0006241!2.81e-15!52;UBERON:0007135!2.81e-15!52;UBERON:0000153!3.29e-15!94;UBERON:0007811!5.03e-15!86;UBERON:0002346!5.85e-15!71;UBERON:0003075!5.85e-15!71;UBERON:0007284!5.85e-15!71;UBERON:0003056!8.54e-15!49;UBERON:0003080!6.15e-14!40;UBERON:0002780!2.02e-13!39;UBERON:0001890!2.02e-13!39;UBERON:0006240!2.02e-13!39;UBERON:0004121!1.21e-12!102;UBERON:0000924!1.21e-12!102;UBERON:0006601!1.21e-12!102;UBERON:0002020!2.90e-11!34;UBERON:0002791!3.05e-10!29;UBERON:0003528!3.05e-10!29;UBERON:0001893!3.05e-10!29;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10;UBERON:0000475!2.13e-07!200;UBERON:0000956!5.21e-07!21;UBERON:0001869!5.21e-07!21;UBERON:0000203!5.21e-07!21;UBERON:0002619!7.39e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.19e-17,64;UBERON:0003075,7.19e-17,64;UBERON:0007284,7.19e-17,64;UBERON:0000073,1.31e-16,54;UBERON:0001017,1.55e-16,73;UBERON:0001016,2.34e-16,75;UBERON:0001049,2.81e-15,52;UBERON:0005068,2.81e-15,52;UBERON:0006241,2.81e-15,52;UBERON:0007135,2.81e-15,52;UBERON:0003056,8.54e-15,49;UBERON:0000955,3.37e-14,47;UBERON:0006238,3.37e-14,47;UBERON:0003080,6.15e-14,40;UBERON:0004121,8.96e-14,95;UBERON:0000924,8.96e-14,95;UBERON:0006601,8.96e-14,95;UBERON:0002616,1.17e-13,46;UBERON:0002780,2.02e-13,39;UBERON:0001890,2.02e-13,39;UBERON:0006240,2.02e-13,39;UBERON:0010371,3.50e-13,73;UBERON:0002020,2.90e-11,34;UBERON:0003528,3.05e-10,29;UBERON:0002791,3.05e-10,29;UBERON:0001893,3.05e-10,29;UBERON:0002021,7.61e-08,10;UBERON:0000411,7.61e-08,10;UBERON:0001950,7.61e-08,10;UBERON:0010314,9.56e-08,92;UBERON:0000956,5.21e-07,21;UBERON:0001869,5.21e-07,21;UBERON:0000203,5.21e-07,21;UBERON:0011216,5.88e-07,194;UBERON:0002619,7.39e-07,17
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30404960703,7.41753905116514,5.53778153359751,19.1081837648342,6.22151871800606,6.83473244395618,2.81846469342095,15.1011711504419,16.5458490457098,12.6393272423631,11.6243841129958,10.9821481569006,3.28600268208111,7.03103678157331,13.6317147753424,7.00593950395418,6.91272015018877,13.5884781870117,15.4071163620525,14.4822449602406,13.9015280586241,13.2479754793936,14.3050575442511,9.61563596159751,9.00906115764921,6.66378569657774,4.26758117267999,8.87270429204197,11.6949456887703,10.8719381053572,4.44132228289962,16.7780483875256,57.4943619238828,34.2706932248197,33.9126925055438,13.7164611762855,27.0262764649702,18.681465675261,11.3615240911905,3.00943262421218,101.655331671072,92.5253725379426,100.829610365334,46.9159187798267,82.8949848922477,68.7408446624627,73.5774525252668,70.7004289062026,80.2062063902042,80.7706086332839,42.864174552265,16.3600198094423,18.2684958156924,17.0174701947806,19.4940241244024,16.9136027774013,15.3350242183115,15.4526292929171,15.0832028508153,9.34979683526051,14.9552786935241,15.2787336522722,12.735245015904,12.0367286521154,12.9804159839686,12.3836359733599,12.3996228760995,11.767462448286,15.6592642305257,16.1918812147837,17.4863318716562,13.133209655791,14.3061713968393,15.9881058295561,11.5754537910857,14.63832716526,15.3659497213129,15.2580432633949,13.4446072707403,20.2011217796786,13.4057570480317,10.2444661670586,13.5046244245997,11.3103894065755,9.06661071611365,17.2369298777183,14.2698281151699,5.37177635120746,8.22539827896026,3.97064554415128,8.57910991795559
|phase1_expression=15.6945870162698,10.8182376368202,9.55498402718026,9.0739263392049,13.023288978605,29.5467518564926,22.8940387783615,36.4127772105245,145.997904871278,140.672780319518,96.7381520474103,77.6183107024623,23.9681021903688,46.7699152941636,15.6561588053361,12.755941845559,6.29605690315332,7.09789872056035,10.2835825204304,19.0975343309114,22.1112554392781,11.1205865344992,12.7987896678078,7.35965144849671,6.8822784320151,7.46501553349526,11.1998119001359,18.0995835456147,2.66032787238923,4.53654233567875,5.54326276638262,13.3356441426523,12.916360539276,0,32.640233031894,48.5405164446798,40.4255325399491,1.25559489221072,0,0.523523743973798,0,1.36609096991689,0.485510353031154,24.5498795052376,20.9850247624395,35.6080699193662,8.60630478782843,13.5175596955877,10.9843091367236,16.9154012194627,11.198913730029,11.5002051491977,16.1071301815427,31.9159342484992,41.0034434953806,18.0081605225163,16.6189395164479,11.3447860301037,17.1968991730658,21.1596391708813,17.747279298173,1.0165335962074,1.77858959222228,3.1496490104849,0.988866362566974,4.9733608046227,3.89480143673926,3.07374644257244,15.7608210708886,13.6355997715008,17.2466468308133,18.852964970651,15.4607978666129,17.7611658861683,15.5269663049543,14.7075005857603,61.6648933596577,62.6944829998272,65.589989700416,28.6193244374521,35.4057180741325,32.2966289745191,37.9688878641878,48.9603470727562,48.8954392885792,30.0521157183141,28.9014512022179,27.4007185363192,14.9180600866373,14.9631689011435,50.7262855227936,34.4169550792555,16.319312008986,37.2395202230094,30.5394916200404,26.8816132258401,25.7013288841106,11.0779709675738,9.09251016110041,7.42013106471715,11.2674735821344,41.0644727725817,25.4805239706646,42.6640021891999,16.0203370348298,13.6814327356553,9.60496445528088,23.9786147410026,31.5904218049549,25.383605780085,16.3076207160168,13.0920155674221,10.8389283710347,9.94769427647309,4.46837087115678,13.571991863605,11.6181634835156,22.1237016087465,18.5768215909474,7.60304194752823,14.1338571814652,12.6067565815158,5.59175283654366,17.8596286177044,13.6140359428746,12.0064815948038,6.94927722134338,8.99854096490112,8.76784566804146,45.8359356578757,64.5075849974263,18.8481528169297,59.7955661461431,59.3259861006367,80.2061851999902,55.1620294430376,4.9901288286655,9.33052279575698,4.29628689337247,21.0441855886474,26.804811250317,22.3005041300469,23.0479526150847,22.1536082218501,15.1041028115948,17.6796933993093,16.8663104207512,13.9699820199068,33.6286068975234,25.5293208226556,23.0495972654773,10.7405908889512,13.6243152120543,8.358051996532,11.5237996388448,16.9179126795719,7.02213187313235,10.2939162845886,9.94572247884574,12.2204205795946,10.0846205791871,6.66229627405755,9.70653415899362,7.67380503814875,6.94202007993202,7.44108623201305,8.31647544338819,3.85325629811659,3.62031669809657,2.62667942526552,4.70199095365963,11.2573990317506,9.00155472693308,5.50246316917524,52.1519072439036,18.8315440654091,5.94753809370836,20.0982430664294,28.1540490706509,23.6881405297647,16.3661675879059,11.6976444281539,14.2321948060717,10.6526350623033,14.7104009078799,6.42325923423642,6.03204501120647,2.78539060857611,7.40863531052657,10.7858329038507,11.2391785934841,6.96994456390285,14.6044283733873,18.3940105301663,13.5249282807697,16.6994088833158,16.2920089220806,7.78507600782536,18.7180149887802,45.7591458736767,40.3486730552333,39.3636952910544,52.4721149944254,28.0299777603038,27.9113773060748,22.0364870137157,17.8516906821883,13.0235666266305,11.9674150337267,10.0693648107784,3.24270453550071,8.23684239564244,0,2.60498663367952,7.80094182786401,14.6495749209325,17.0427542845817,12.0610880340842,11.4546977903295,24.254900706622,12.87423313892,10.0149600607361,7.97946844180907,6.86775655511445,3.80869825417622,8.19561321002755,5.35959489961049,2.6575762757853,5.10255259703959,9.34020893879707,11.7425787668809,7.66640010482011,10.5553898757491,8.70249094109935,29.0140921081231,11.0374698521893,44.793614606594,36.1011994703986,26.0656563148914,22.4699125211892,21.4545589203055,22.645447169205,16.8030250231583,15.7719406648684,20.0518806674155,21.7968928707401,15.382806663646,19.8733983379692,23.7172666767914,50.1261253618019,20.7232524404072,12.8207234640424,4.39794790254655,22.4359367242648,6.63725691699814,16.9946445308487,11.1859716076958,9.05304382828311,15.651000322681,10.1453598821496,6.71913562237375,3.63533729477506,6.41695281092498,8.84902922220285,10.5418608574999,10.3135543248187,50.7255012573144,25.0284920703521,18.4982917809339,19.7190072229065,26.0690143454142,22.831208653065,25.0114511315224,20.7036165397928,34.027397669238,17.7938939525609,31.0945041257496,12.5313552235525,3.22928853391811,6.93598636673792,5.61050016814741,6.56563598980245,10.2018292820448,37.826761610144,25.9723738812736,11.3512777379772,16.1119238811649,14.1276342753518,19.0004976532225,18.5310320297283,4.75939603982795,8.6769900440668,8.56839837587428,5.72802370809068,18.1893196309153,13.419084830372,13.5006676027252,11.2907679847813,10.2630404960703,7.41753905116514,5.53778153359751,19.1081837648342,6.22151871800606,6.83473244395618,2.81846469342095,15.1011711504419,16.5458490457098,12.6393272423631,11.6243841129958,10.9821481569006,3.28600268208111,7.03103678157331,13.6317147753424,7.00593950395418,6.91272015018877,13.5884781870117,15.4071163620525,14.4822449602406,13.9015280586241,13.2479754793936,14.3050575442511,9.61563596159751,9.00906115764921,6.66378569657774,4.26758117267999,8.87270429204197,11.6949456887703,10.8719381053572,4.44132228289962,16.7780483875256,57.4943619238828,34.2706932248197,33.9126925055438,13.7164611762855,27.0262764649702,18.681465675261,11.3615240911905,3.00943262421218,101.655331671072,92.5253725379426,100.829610365334,46.9159187798267,82.8949848922477,68.7408446624627,73.5774525252668,70.7004289062026,80.2062063902042,80.7706086332839,42.864174552265,16.3600198094423,18.2684958156924,17.0174701947806,19.4940241244024,16.9136027774013,15.3350242183115,15.4526292929171,15.0832028508153,9.34979683526051,14.9552786935241,15.2787336522722,12.735245015904,12.0367286521154,12.9804159839686,12.3836359733599,12.3996228760995,11.767462448286,15.6592642305257,16.1918812147837,17.4863318716562,13.133209655791,14.3061713968393,15.9881058295561,11.5754537910857,14.63832716526,15.3659497213129,15.2580432633949,13.4446072707403,20.2011217796786,13.4057570480317,10.2444661670586,13.5046244245997,11.3103894065755,9.06661071611365,17.2369298777183,14.2698281151699,5.37177635120746,8.22539827896026,3.97064554415128,8.57910991795559
|short_description=p2@Hsph1
|short_description=p2@Hsph1
}}
}}

Latest revision as of 18:53, 25 September 2015

Short description:p2@Hsph1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Hsph1_5end
Coexpression cluster:MCL_coexpression_mm9:910
Association with transcript: 23bp_to_NM_013559, uc009apx.1, uc009apy.1, uc009apz.1, uc009aqa.1_5end
EntrezGene:Hsph1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Hsph1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E936.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7146.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2140.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E696.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F177.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E846.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I218.10
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F532.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F648.54
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F740.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.99
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.01
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C317.20
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D361.66
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F362.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D765.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.97
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.40
Mouse Schwann, donor1.CNhs12507.11728-123D914.92
Mouse Schwann, donor2.CNhs12573.11746-123F914.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G350.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H141.06
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.98
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D725.38
adrenal gland, embryo E14.CNhs11038.406-44C516.31
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I313.57
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H122.12
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A614.13
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.77
corpora quadrigemina, adult.CNhs10501.16-22A445.84
corpus striatum, adult.CNhs10487.19-21D864.51
corpus striatum, neonate N00.CNhs11226.630-43F118.85
cortex, adult.CNhs10473.12-14D559.80
cortex, neonate N30.CNhs11107.1392-42F259.33
diencephalon, adult.CNhs10482.20-12F280.21
diencephalon, neonate N30.CNhs11201.1388-42B255.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G421.04
eyeball, embryo E12.CNhs11016.345-16C626.80
eyeball, embryo E14.CNhs10521.399-16E222.30
eyeball, embryo E15.CNhs10593.426-16C923.05
eyeball, embryo E17.CNhs11023.1261-18D422.15
eyeball, neonate N00.CNhs11207.633-15C615.10
eyeball, neonate N01.CNhs11140.1532-43E717.68
eyeball, neonate N02.CNhs11205.1551-44G816.87
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E233.63
forelimb, embryo E12.CNhs10600.359-14H225.53
forelimb, embryo E13.CNhs10589.384-1E223.05
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B511.52
gonad, embryo E13.CNhs11044.1564-45I616.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E912.22
heart, embryo E12.CNhs11015.353-12F510.08
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G14.70
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E852.15
hippocampus, neonate N00.CNhs11228.627-43G118.83
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A320.10
intestine, embryo E12.CNhs11019.1251-16I528.15
intestine, embryo E13.CNhs11010.381-16D523.69
intestine, embryo E15.CNhs10602.976-16D816.37
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D314.23
intestine, embryo E18.CNhs10526.1289-20F710.65
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I914.60
kidney, embryo E15.CNhs10997.434-16F818.39
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I216.70
kidney, embryo E18.CNhs11001.1288-20C716.29
kidney, neonate N00.CNhs11214.646-21G77.79
kidney, neonate N10.CNhs11206.758-6D518.72
kidney, neonate N20.CNhs11113.832-19I145.76
kidney, neonate N25.CNhs11122.1353-25F340.35
kidney, neonate N30.CNhs11203.1385-42H139.36
liver, adult pregnant day01.CNhs10466.508-5B252.47
liver, embryo E12.CNhs10601.355-15F828.03
liver, embryo E13.CNhs10524.378-3H627.91
liver, embryo E14.CNhs10594.409-16E122.04
liver, embryo E15.CNhs10520.433-16D717.85
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A311.97
liver, embryo E18.CNhs10579.499-43G410.07
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H117.04
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G224.25
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C244.79
medulla oblongata, neonate N30.CNhs11200.1396-42A336.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.47
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.65
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I950.13
ovary, adult.CNhs10507.91-2I720.72
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G622.44
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G850.73
pituitary gland, embryo E12.CNhs11018.346-16E625.03
pituitary gland, embryo E13.CNhs11009.370-44C718.50
pituitary gland, embryo E14.CNhs11037.398-44A519.72
pituitary gland, embryo E15.CNhs10592.427-16B926.07
pituitary gland, embryo E16.CNhs11036.449-43F622.83
pituitary gland, embryo E17.CNhs11039.1265-44F525.01
pituitary gland, neonate N00.CNhs11190.1308-22E920.70
placenta, adult pregnant day10.CNhs10472.539-13I734.03
placenta, adult pregnant day17.CNhs10464.577-18G317.79
prostate, adult.CNhs10470.859-1F831.09
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H36.94
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C937.83
spleen, adult.CNhs10465.25-2G225.97
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F216.11
spleen, neonate N10.CNhs11116.752-24D114.13
spleen, neonate N20.CNhs11112.824-19H119.00
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.57
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E318.19
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D413.50
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E419.11
stomach, neonate N30.CNhs11134.1386-42I16.22
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F515.10
testis, embryo E15.CNhs11034.443-27C516.55
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I511.62
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D913.63
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B513.59
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I214.48
thymus, embryo E16.CNhs11002.456-26C513.90
thymus, embryo E17.CNhs10581.478-18C113.25
thymus, embryo E18.CNhs10595.1273-19G414.31
thymus, neonate N02.CNhs11181.1541-43F89.62
thymus, neonate N03.CNhs11137.2104-43C79.01
thymus, neonate N06.CNhs11197.681-26C46.66
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A211.69
thymus, neonate N25.CNhs11125.1362-25G710.87
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B416.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H357.49
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F734.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G533.91
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F527.03
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D511.36
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1101.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A292.53
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3100.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D746.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A482.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A568.74
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A673.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A770.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A880.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A980.77
whole body, embryo E11.CNhs11014.324-5I842.86
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H218.27
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B119.49
whole body, embryo E16.CNhs10514.453-14F216.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.03e-0739
electrically active cell1.03e-0739
embryonic cell2.36e-0770
neuron4.10e-0733
neuronal stem cell4.10e-0733
neuroblast4.10e-0733
electrically signaling cell4.10e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm7.19e-1764
neural plate7.19e-1764
presumptive neural plate7.19e-1764
regional part of nervous system1.31e-1654
central nervous system1.55e-1673
nervous system2.34e-1675
neural tube2.81e-1552
neural rod2.81e-1552
future spinal cord2.81e-1552
neural keel2.81e-1552
pre-chordal neural plate8.54e-1549
brain3.37e-1447
future brain3.37e-1447
anterior neural tube6.15e-1440
ectoderm-derived structure8.96e-1495
ectoderm8.96e-1495
presumptive ectoderm8.96e-1495
regional part of brain1.17e-1346
regional part of forebrain2.02e-1339
forebrain2.02e-1339
future forebrain2.02e-1339
ecto-epithelium3.50e-1373
gray matter2.90e-1134
brain grey matter3.05e-1029
regional part of telencephalon3.05e-1029
telencephalon3.05e-1029
occipital lobe7.61e-0810
visual cortex7.61e-0810
neocortex7.61e-0810
structure with developmental contribution from neural crest9.56e-0892
cerebral cortex5.21e-0721
cerebral hemisphere5.21e-0721
pallium5.21e-0721
organ system subdivision5.88e-07194
regional part of cerebral cortex7.39e-0717
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