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FFCP PHASE1:Mm9::chr5:141124934..141124968,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78339
|EntrezGene=78339
|HGNC=
|HGNC=
|MCL_coexpression_id=1085
|TSSclassifier=NA
|UniProt=Q6P5F7
|UniProt=Q6P5F7
|association_with_transcript=16bp_to_ENSMUST00000042661,NM_175274,uc009ahw.2,uc012egc.1_5end
|association_with_transcript=16bp_to_ENSMUST00000042661,NM_175274,uc009ahw.2,uc012egc.1_5end
|cluster_id=chr5:141124934..141124968,-
|description=CAGE_peak_2_at_Ttyh3_5end
|description=CAGE_peak_2_at_Ttyh3_5end
|id=chr5:141124934..141124968,-
|id=chr5:141124934..141124968,-
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002319!8.10e-12!43;CL:0000221!1.34e-11!44;CL:0000133!1.34e-11!44;CL:0000540!8.40e-10!33;CL:0000047!8.40e-10!33;CL:0000031!8.40e-10!33;CL:0000404!8.40e-10!33;CL:0000055!3.50e-08!50
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002319!8.10e-12!43;CL:0000221!1.34e-11!44;CL:0000133!1.34e-11!44;CL:0000540!8.40e-10!33;CL:0000047!8.40e-10!33;CL:0000031!8.40e-10!33;CL:0000404!8.40e-10!33;CL:0000055!3.50e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-12,23;CL:0000337,1.19e-12,23;CL:0002319,8.10e-12,43;CL:0000221,1.33e-11,44;CL:0000133,1.33e-11,44;CL:0000540,8.40e-10,33;CL:0000047,8.40e-10,33;CL:0000031,8.40e-10,33;CL:0000404,8.40e-10,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.10e-25!73;UBERON:0005743!6.10e-25!73;UBERON:0004121!7.66e-24!102;UBERON:0000924!7.66e-24!102;UBERON:0006601!7.66e-24!102;UBERON:0000073!5.90e-23!75;UBERON:0001016!5.90e-23!75;UBERON:0002346!4.00e-22!71;UBERON:0003075!4.00e-22!71;UBERON:0007284!4.00e-22!71;UBERON:0001049!1.65e-21!52;UBERON:0005068!1.65e-21!52;UBERON:0006241!1.65e-21!52;UBERON:0007135!1.65e-21!52;UBERON:0000955!9.55e-20!50;UBERON:0006238!9.55e-20!50;UBERON:0002020!1.65e-19!34;UBERON:0002616!4.05e-19!49;UBERON:0002791!3.15e-16!29;UBERON:0003528!3.15e-16!29;UBERON:0001893!3.15e-16!29;UBERON:0000033!3.33e-16!63;UBERON:0003080!4.66e-16!40;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0003056!4.60e-15!49;UBERON:0000956!2.85e-12!21;UBERON:0001869!2.85e-12!21;UBERON:0000203!2.85e-12!21;UBERON:0002619!7.17e-10!17;UBERON:0000153!1.76e-09!94;UBERON:0007811!1.32e-08!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.09e-25,73;UBERON:0001016,5.89e-23,75;UBERON:0000073,1.87e-22,54;UBERON:0001049,1.65e-21,52;UBERON:0005068,1.65e-21,52;UBERON:0006241,1.65e-21,52;UBERON:0007135,1.65e-21,52;UBERON:0004121,3.69e-21,95;UBERON:0000924,3.69e-21,95;UBERON:0006601,3.69e-21,95;UBERON:0010371,3.52e-20,73;UBERON:0002346,1.18e-19,64;UBERON:0003075,1.18e-19,64;UBERON:0007284,1.18e-19,64;UBERON:0002020,1.65e-19,34;UBERON:0000955,1.73e-18,47;UBERON:0006238,1.73e-18,47;UBERON:0002616,7.20e-18,46;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0003080,4.66e-16,40;UBERON:0002780,1.20e-15,39;UBERON:0001890,1.20e-15,39;UBERON:0006240,1.20e-15,39;UBERON:0003056,4.60e-15,49;UBERON:0010314,1.56e-12,92;UBERON:0000956,2.85e-12,21;UBERON:0001869,2.85e-12,21;UBERON:0000203,2.85e-12,21;UBERON:0002619,7.17e-10,17
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.3126088536853,10.245326504709,9.17122767733946,6.74321731924104,7.76942483818158,1.57053565190418,5.96228877142247,1.86401793926078,0.56369293868419,34.8373552282471,29.7825282822776,35.9734698436488,35.1314719859429,30.2431464628493,18.5424437060291,14.8432998722103,3.56521771047417,2.41584120826006,5.47257011889944,5.68820017130721,9.93353554921804,5.6491026440655,2.46849563657811,3.58053391334963,5.36439657909415,4.08664528367894,3.2491695978407,2.82706059854813,3.12447907285499,5.34378781225255,4.97035191772737,3.75226182397285,4.32444538071805,2.49403421976732,0.665957860122194,0.269141569828427,0.167884616364078,5.02292944483695,2.81523713176773,5.67770035228522,3.42989406526505,2.00628841614145,55.9104324190896,37.2863441570813,42.9671635079547,54.8211651676363,32.1988784292202,33.2373314851468,31.0510350106631,27.9199145999017,26.2822597210839,38.3142630696347,4.4628559461196,21.9463680370567,14.000155671839,11.1829089851415,7.33646069197938,9.00833191405069,13.7792971237001,14.2164189494837,12.5158491740808,12.6348605881899,10.8996098952803,12.8265912142532,11.3306224038558,15.0459108151443,14.2439963009921,11.9073422820768,18.1938391733423,14.8540099757053,14.4230065281157,11.7759136107518,12.6861623382604,10.2935967572416,12.1602456873134,12.4997918303803,13.6458601602229,9.64606529965112,13.9025259383307,8.68130047744881,13.4446072707403,8.41713407486608,14.9480122836459,15.6622126977146,11.4584692087513,14.0992525479229,10.6098636039628,30.2270799304915,13.8019648982791,10.5286816483666,7.07766828654721,14.117850823649,9.50658126043728
|phase1_expression=7.68714466103011,5.93258192986914,6.3699893514535,16.6355316218757,26.5474736871564,7.21880869221126,7.70921713965235,8.90950931746876,6.19470377467334,9.83071010552373,1.54096171402954,0.797721589953364,18.8320802924326,18.8828069225034,3.33109761815663,3.03712901084739,6.29605690315332,9.46386496074713,9.04955261797876,12.7316895539409,13.7770130044733,10.1276770224903,4.4403964153619,3.83981814704176,5.73523202667925,5.7423196411502,4.73838195774982,4.30942465371778,17.29213117053,13.8616571367962,4.6563407237614,1.90509202037889,4.92051830067656,0,4.62162591602039,4.82080471539628,7.9626048942324,7.53356935326434,8.5946887897618,2.61761871986899,13.5293242247133,23.9065919735456,9.71020706062307,5.03587271902309,4.46058497365864,6.24058957349717,17.2126095756569,63.4453205067099,45.6947260087701,33.2475127417025,31.4969448657066,27.3129872293446,6.04017381807851,17.4086914082723,8.4023449785616,5.14518872071894,8.02293631828519,4.64104883049698,44.1049884673923,25.3915670050576,32.3254015788151,21.3472055203553,9.78224275722253,31.0465402462083,17.7995945262055,30.5506449426823,34.1544125990981,64.5486752940212,45.6234294157302,46.0370249711065,51.73994049244,55.9875929431455,32.2468069789356,36.6247489652713,31.629005436018,27.5765635983006,19.82085857989,32.0495218593821,29.9532739849675,39.0383411681374,42.3587789879157,36.4639359389732,22.8930059181132,19.1339287410771,31.6292372897997,53.0331453852602,50.5419466836815,48.4638559145781,2.34751199332871,3.24957708459178,10.4351215932604,5.16254326188832,0.679971333707751,2.15881276655127,0.649776417447669,1.34408066129201,5.19644354487482,19.9403477416328,13.768658243952,12.3668851078619,10.8449433228044,19.2489716121477,33.1246811618639,28.4426681261332,1.5154372870785,1.26679932737549,1.51657333504435,6.8510327831436,16.3130866697718,14.2504453502232,15.7871647357184,24.6617037432834,34.5923245884088,22.9098413639986,29.5147654910619,28.9033160058254,1.73036477414062,2.89198713839823,11.4999371753484,11.6472131962135,6.62524555381181,7.27312879702833,0,12.296793474485,25.3430515244281,7.40825460104915,1.55759661857696,1.19980546198682,1.01656181658452,28.9095934051308,54.4425717354165,39.2041578592137,33.8957424374939,43.7273432034865,29.0903262383384,40.3980745038717,14.8685471221462,17.7901967972433,34.1175723885461,2.31486041475121,10.7999967659044,12.644615743841,12.4242869565691,14.9197769657358,15.7844678031081,14.2206229516183,19.021450085625,15.5222022443409,11.4251036254406,14.9393803332577,15.8356011747554,17.3164628617784,12.5121262151519,14.9748431604532,13.1700567301084,17.5150154800274,2.1066395619397,0.772043721344145,1.70498099637356,8.49215667395558,7.97388603935727,8.4629168886677,10.6535131013345,9.24791889212798,6.17068451549513,6.27841650826101,7.24338183778972,5.3712057488898,6.91151369636618,5.25335885053105,5.99909190639332,4.23979963533464,2.41505126820156,3.22095405024892,29.6508827475419,62.6689089389842,2.97376904685418,3.17340679996253,11.5175655289026,12.5407802804637,11.7269389803105,16.1346819698674,16.4559752445204,18.6421113590308,12.3377556001573,11.1995289212327,11.3100843960121,13.7279965708394,13.4525220112193,11.6846523125049,4.75503709724327,5.57595565112228,9.293727146701,13.0243304375091,15.7790829942313,9.16430975303914,8.14600446104028,8.76697748628982,11.5722862937391,7.67572769493931,5.49495547444812,5.42947521255922,4.74324203339438,5.83957870006329,3.93117990226406,4.04751802292737,4.05720242777006,6.27060615356284,4.83789118384698,3.45235364940973,5.67473293712624,4.11842119782122,4.31304619582064,5.20997326735905,4.68056509671841,5.05157755894223,1.97337154874103,5.78932225636041,18.1058126363273,10.9905018826881,13.3631280682461,13.0703716046895,14.0814148973101,14.9080569123216,13.5684875305028,18.9279638422065,25.8521636334153,27.6830862060969,38.7475087837694,25.3988137809394,24.866637388689,25.7475324275091,13.5712155545345,9.79030230873677,47.2093702098275,17.1080782708934,20.3899249284496,31.6471553798949,16.3934945376675,2.27223834483936,10.4117712407365,7.80877488593277,13.1408272617007,14.3381278771531,10.0259403337077,10.4738316391868,14.5731852602962,12.5670018901864,11.8586333383957,41.7717711348349,10.7874464758284,16.9162323483892,16.2886959353576,10.2281476242972,3.98235415019888,8.49732226542435,9.67435382287203,4.71512699389745,12.6979813938732,5.22639751504677,5.68542244970086,8.36127577798263,4.63446591900138,3.79244109522979,2.10837217149998,1.03135543248187,6.46835250932197,9.72329907769075,15.264324686365,14.3605813471167,14.5418991586664,18.3719882130133,13.3284706687718,10.9607381681256,1.87737366450968,2.33015277950202,1.7642271844397,11.7069239588451,10.8181165886257,14.7766666073982,17.6671069124642,22.4873032650734,11.9507143018239,24.2907145633768,9.05615668228619,15.2726282292785,7.77817014952789,7.15800136617826,9.43190171275074,8.23601423543482,4.41943917984024,6.15786390224095,6.49539876880792,0.954670618015114,12.4952717464548,14.6390016331331,12.3126088536853,10.245326504709,9.17122767733946,6.74321731924104,7.76942483818158,1.57053565190418,5.96228877142247,1.86401793926078,0.56369293868419,34.8373552282471,29.7825282822776,35.9734698436488,35.1314719859429,30.2431464628493,18.5424437060291,14.8432998722103,3.56521771047417,2.41584120826006,5.47257011889944,5.68820017130721,9.93353554921804,5.6491026440655,2.46849563657811,3.58053391334963,5.36439657909415,4.08664528367894,3.2491695978407,2.82706059854813,3.12447907285499,5.34378781225255,4.97035191772737,3.75226182397285,4.32444538071805,2.49403421976732,0.665957860122194,0.269141569828427,0.167884616364078,5.02292944483695,2.81523713176773,5.67770035228522,3.42989406526505,2.00628841614145,55.9104324190896,37.2863441570813,42.9671635079547,54.8211651676363,32.1988784292202,33.2373314851468,31.0510350106631,27.9199145999017,26.2822597210839,38.3142630696347,4.4628559461196,21.9463680370567,14.000155671839,11.1829089851415,7.33646069197938,9.00833191405069,13.7792971237001,14.2164189494837,12.5158491740808,12.6348605881899,10.8996098952803,12.8265912142532,11.3306224038558,15.0459108151443,14.2439963009921,11.9073422820768,18.1938391733423,14.8540099757053,14.4230065281157,11.7759136107518,12.6861623382604,10.2935967572416,12.1602456873134,12.4997918303803,13.6458601602229,9.64606529965112,13.9025259383307,8.68130047744881,13.4446072707403,8.41713407486608,14.9480122836459,15.6622126977146,11.4584692087513,14.0992525479229,10.6098636039628,30.2270799304915,13.8019648982791,10.5286816483666,7.07766828654721,14.117850823649,9.50658126043728
|short_description=p2@Ttyh3
|short_description=p2@Ttyh3
}}
}}

Latest revision as of 16:16, 25 September 2015

Short description:p2@Ttyh3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ttyh3_5end
Coexpression cluster:MCL_coexpression_mm9:1085
Association with transcript: 16bp_to_ENSMUST00000042661, NM_175274, uc009ahw.2, uc012egc.1_5end
EntrezGene:Ttyh3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ttyh3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.83
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B917.29
Ileum epithelium, pool2.CNhs13232.10253-104C113.86
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C263.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B845.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C333.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C344.10
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C731.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D230.55
Mouse Microglia, donor1.CNhs12629.11718-123C834.15
Mouse Microglia, donor2.CNhs12634.11736-123E864.55
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D545.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F546.04
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D951.74
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F155.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.95
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D653.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E148.46
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H916.31
adrenal gland, adult.CNhs10508.49-24D714.25
adrenal gland, embryo E14.CNhs11038.406-44C515.79
adrenal gland, embryo E16.CNhs11004.1254-43D624.66
adrenal gland, embryo E17.CNhs11043.1263-45I134.59
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C129.51
adrenal gland, neonate N25.CNhs11223.1377-27I328.90
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F511.65
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I225.34
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D854.44
corpus striatum, neonate N00.CNhs11226.630-43F139.20
cortex, adult.CNhs10473.12-14D533.90
cortex, neonate N30.CNhs11107.1392-42F243.73
diencephalon, adult.CNhs10482.20-12F229.09
diencephalon, neonate N30.CNhs11201.1388-42B240.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.79
epididymis, adult.CNhs10490.58-23B234.12
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C610.80
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C912.42
eyeball, embryo E17.CNhs11023.1261-18D414.92
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G819.02
eyeball, neonate N16.CNhs11188.777-19A215.52
forelimb, embryo E11.CNhs10596.335-25E211.43
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E215.84
forelimb, embryo E14.CNhs10577.413-26A817.32
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G16.00
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E829.65
hippocampus, neonate N00.CNhs11228.627-43G162.67
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D316.46
intestine, embryo E18.CNhs10526.1289-20F718.64
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F213.73
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F813.02
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G78.77
kidney, neonate N10.CNhs11206.758-6D511.57
kidney, neonate N20.CNhs11113.832-19I17.68
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B118.11
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F813.36
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C618.93
lung, neonate N06.CNhs11212.683-20E525.85
lung, neonate N07.CNhs11111.715-19A327.68
lung, neonate N10.CNhs11219.750-23E638.75
lung, neonate N20.CNhs11109.822-18A425.40
lung, neonate N25.CNhs11119.1359-25C724.87
lung, neonate N30.CNhs11133.1394-42H225.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B647.21
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C220.39
medulla oblongata, neonate N30.CNhs11200.1396-42A331.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I941.77
ovary, adult.CNhs10507.91-2I710.79
ovary, embryo E18.CNhs11040.505-44H716.92
ovary, neonate N00.CNhs11217.1299-22I416.29
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G312.70
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C715.26
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F618.37
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C311.71
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H314.78
skin, neonate N06.CNhs11097.693-20I517.67
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C924.29
spleen, adult.CNhs10465.25-2G29.06
spleen, embryo E16.CNhs11035.461-43C115.27
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H19.43
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E312.50
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D412.31
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F534.84
testis, embryo E15.CNhs11034.443-27C529.78
testis, embryo E16.CNhs11033.470-26G535.97
testis, embryo E17.CNhs11029.486-18I535.13
testis, embryo E18.CNhs11027.503-18G530.24
testis, neonate N00.CNhs11189.1300-22B718.54
testis, neonate N07.CNhs11222.726-26I414.84
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I25.65
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E45.34
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C921.95
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.10
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I530.23
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.19e-1223
neuroblast (sensu Vertebrata)1.19e-1223
neural cell8.10e-1243
ectodermal cell1.33e-1144
neurectodermal cell1.33e-1144
neuron8.40e-1033
neuronal stem cell8.40e-1033
neuroblast8.40e-1033
electrically signaling cell8.40e-1033

Uber anatomy
Ontology termp-valuen
central nervous system6.09e-2573
nervous system5.89e-2375
regional part of nervous system1.87e-2254
neural tube1.65e-2152
neural rod1.65e-2152
future spinal cord1.65e-2152
neural keel1.65e-2152
ectoderm-derived structure3.69e-2195
ectoderm3.69e-2195
presumptive ectoderm3.69e-2195
ecto-epithelium3.52e-2073
neurectoderm1.18e-1964
neural plate1.18e-1964
presumptive neural plate1.18e-1964
gray matter1.65e-1934
brain1.73e-1847
future brain1.73e-1847
regional part of brain7.20e-1846
brain grey matter3.15e-1629
regional part of telencephalon3.15e-1629
telencephalon3.15e-1629
anterior neural tube4.66e-1640
regional part of forebrain1.20e-1539
forebrain1.20e-1539
future forebrain1.20e-1539
pre-chordal neural plate4.60e-1549
structure with developmental contribution from neural crest1.56e-1292
cerebral cortex2.85e-1221
cerebral hemisphere2.85e-1221
pallium2.85e-1221
regional part of cerebral cortex7.17e-1017
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