FFCP PHASE1:Mm9::chr7:28860330..28860347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:28860330..28860347,+ | |||
|description=CAGE_peak_at_chr7:28860330..28860347,+ | |description=CAGE_peak_at_chr7:28860330..28860347,+ | ||
|id=chr7:28860330..28860347,+ | |id=chr7:28860330..28860347,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.06e-09!6;CL:0000677!2.06e-09!6;CL:0000212!2.06e-09!6;CL:0000584!2.06e-09!6;CL:0002563!1.78e-08!9;CL:0002251!1.78e-08!9;CL:0000075!5.35e-08!7;CL:0000473!2.03e-07!3;CL:0000627!2.03e-07!3;CL:0000682!2.03e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.09e-16,6;CL:0000677,6.09e-16,6;CL:0000584,6.09e-16,6;CL:0000075,1.21e-13,7;CL:0002563,1.42e-10,9;CL:0002251,1.42e-10,9;CL:0000066,7.34e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.38e-24!43;UBERON:0005409!9.21e-21!59;UBERON:0000344!7.29e-20!15;UBERON:0001242!6.44e-16!13;UBERON:0000060!6.44e-16!13;UBERON:0001262!6.44e-16!13;UBERON:0004786!6.44e-16!13;UBERON:0004923!2.59e-11!24;UBERON:0001007!7.74e-11!128;UBERON:0001555!7.74e-11!128;UBERON:0007026!7.74e-11!128;UBERON:0004119!1.50e-10!130;UBERON:0000925!1.50e-10!130;UBERON:0006595!1.50e-10!130;UBERON:0004921!3.86e-09!126;UBERON:0004185!3.86e-09!126;UBERON:0003350!1.78e-08!9;UBERON:0004808!1.78e-08!9;UBERON:0001277!1.78e-08!9;UBERON:0000331!8.24e-08!3;UBERON:0002116!8.24e-08!3;UBERON:0001204!8.24e-08!3;UBERON:0001168!8.24e-08!3;UBERON:0000485!8.72e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-37,31;UBERON:0000344,6.09e-30,15;UBERON:0005409,1.01e-26,47;UBERON:0001242,4.20e-23,13;UBERON:0001262,4.20e-23,13;UBERON:0004786,4.20e-23,13;UBERON:0004923,5.02e-18,24;UBERON:0002108,1.79e-16,4;UBERON:0000331,9.42e-13,3;UBERON:0002116,9.42e-13,3;UBERON:0001204,9.42e-13,3;UBERON:0001168,9.42e-13,3;UBERON:0001007,1.84e-11,116;UBERON:0001555,1.84e-11,116;UBERON:0007026,1.84e-11,116;UBERON:0004119,3.30e-11,118;UBERON:0000925,3.30e-11,118;UBERON:0006595,3.30e-11,118;UBERON:0003350,1.42e-10,9;UBERON:0004808,1.42e-10,9;UBERON:0001277,1.42e-10,9;UBERON:0004921,4.50e-09,114;UBERON:0001962,5.02e-09,2;UBERON:0001961,5.02e-09,2;UBERON:0001744,5.02e-09,2;UBERON:0001155,1.03e-08,2;UBERON:0000059,1.03e-08,2;UBERON:0000485,1.30e-08,11 | |||
|phase1_expression=0,0,1.36499771816861,1.20985684522732,1.00179145989269,15.277013743982,18.6890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,2.98232065387321,0.57423196411502,2.58457197695445,4.95583835177545,12.9215925230334,5.04060259519861,1.55211357458713,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0,0,0.22237804384487,0.380451252225118,4.2707615539006,1.97638745668813,0.251335208800269,1.39269530428806,0.38992817423824,1.79763881730844,2.16138049874694,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,1.36499771816861,1.20985684522732,1.00179145989269,15.277013743982,18.6890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,2.98232065387321,0.57423196411502,2.58457197695445,4.95583835177545,12.9215925230334,5.04060259519861,1.55211357458713,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0,0,0.22237804384487,0.380451252225118,4.2707615539006,1.97638745668813,0.251335208800269,1.39269530428806,0.38992817423824,1.79763881730844,2.16138049874694,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr7:28860330..28860347,+ | |short_description=p@chr7:28860330..28860347,+ | ||
}} | }} |
Latest revision as of 22:08, 4 August 2015
Short description: | p@chr7:28860330..28860347, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28860330..28860347, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.09e-16 | 6 |
gut absorptive cell | 6.09e-16 | 6 |
enterocyte | 6.09e-16 | 6 |
columnar/cuboidal epithelial cell | 1.21e-13 | 7 |
intestinal epithelial cell | 1.42e-10 | 9 |
epithelial cell of alimentary canal | 1.42e-10 | 9 |
epithelial cell | 7.34e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-37 | 31 |
mucosa | 6.09e-30 | 15 |
gastrointestinal system | 1.01e-26 | 47 |
intestinal mucosa | 4.20e-23 | 13 |
wall of intestine | 4.20e-23 | 13 |
gastrointestinal system mucosa | 4.20e-23 | 13 |
organ component layer | 5.02e-18 | 24 |
small intestine | 1.79e-16 | 4 |
ileal mucosa | 9.42e-13 | 3 |
ileum | 9.42e-13 | 3 |
mucosa of small intestine | 9.42e-13 | 3 |
wall of small intestine | 9.42e-13 | 3 |
digestive system | 1.84e-11 | 116 |
digestive tract | 1.84e-11 | 116 |
primitive gut | 1.84e-11 | 116 |
endoderm-derived structure | 3.30e-11 | 118 |
endoderm | 3.30e-11 | 118 |
presumptive endoderm | 3.30e-11 | 118 |
epithelium of mucosa | 1.42e-10 | 9 |
gastrointestinal system epithelium | 1.42e-10 | 9 |
intestinal epithelium | 1.42e-10 | 9 |
subdivision of digestive tract | 4.50e-09 | 114 |
gut-associated lymphoid tissue | 5.02e-09 | 2 |
mucosa-associated lymphoid tissue | 5.02e-09 | 2 |
lymphoid tissue | 5.02e-09 | 2 |
colon | 1.03e-08 | 2 |
large intestine | 1.03e-08 | 2 |
simple columnar epithelium | 1.30e-08 | 11 |