FFCP PHASE1:Mm9::chr15:75397445..75397483,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23934 | |EntrezGene=23934 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K356,Q9WUC3 | |UniProt=Q8K356,Q9WUC3 | ||
|association_with_transcript=128bp_to_NM_011837,uc007wgv.2_5end | |association_with_transcript=128bp_to_NM_011837,uc007wgv.2_5end | ||
|cluster_id=chr15:75397445..75397483,- | |||
|description=CAGE_peak_3_at_Ly6h_5end | |description=CAGE_peak_3_at_Ly6h_5end | ||
|id=chr15:75397445..75397483,- | |id=chr15:75397445..75397483,- | ||
|ontology_enrichment_celltype=CL:0000540!2.53e-16!33;CL:0000047!2.53e-16!33;CL:0000031!2.53e-16!33;CL:0000404!2.53e-16!33;CL:0000117!3.19e-16!23;CL:0000337!3.19e-16!23;CL:0000393!2.78e-11!39;CL:0000211!2.78e-11!39;CL:0002319!3.69e-11!43;CL:0000221!4.94e-11!44;CL:0000133!4.94e-11!44;CL:0000055!1.82e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.53e-16!33;CL:0000047!2.53e-16!33;CL:0000031!2.53e-16!33;CL:0000404!2.53e-16!33;CL:0000117!3.19e-16!23;CL:0000337!3.19e-16!23;CL:0000393!2.78e-11!39;CL:0000211!2.78e-11!39;CL:0002319!3.69e-11!43;CL:0000221!4.94e-11!44;CL:0000133!4.94e-11!44;CL:0000055!1.82e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.34e-20,23;CL:0000337,6.34e-20,23;CL:0000540,2.06e-18,33;CL:0000047,2.06e-18,33;CL:0000031,2.06e-18,33;CL:0000404,2.06e-18,33;CL:0000393,1.01e-13,39;CL:0000211,1.01e-13,39;CL:0002319,1.89e-13,43;CL:0000221,7.22e-13,44;CL:0000133,7.22e-13,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0000073!1.45e-25!75;UBERON:0001016!1.45e-25!75;UBERON:0001049!4.61e-22!52;UBERON:0005068!4.61e-22!52;UBERON:0006241!4.61e-22!52;UBERON:0007135!4.61e-22!52;UBERON:0003080!9.08e-21!40;UBERON:0002780!1.78e-20!39;UBERON:0001890!1.78e-20!39;UBERON:0006240!1.78e-20!39;UBERON:0002346!2.82e-20!71;UBERON:0003075!2.82e-20!71;UBERON:0007284!2.82e-20!71;UBERON:0000955!1.32e-19!50;UBERON:0006238!1.32e-19!50;UBERON:0002616!2.17e-19!49;UBERON:0003056!4.02e-19!49;UBERON:0002020!4.42e-19!34;UBERON:0004121!1.19e-18!102;UBERON:0000924!1.19e-18!102;UBERON:0006601!1.19e-18!102;UBERON:0000033!3.74e-17!63;UBERON:0002791!3.45e-15!29;UBERON:0003528!3.45e-15!29;UBERON:0001893!3.45e-15!29;UBERON:0000956!1.60e-10!21;UBERON:0001869!1.60e-10!21;UBERON:0000203!1.60e-10!21;UBERON:0000153!1.01e-08!94;UBERON:0007811!1.53e-08!86;UBERON:0002619!4.05e-08!17;UBERON:0002021!2.76e-07!10;UBERON:0000411!2.76e-07!10;UBERON:0001950!2.76e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0000073!1.45e-25!75;UBERON:0001016!1.45e-25!75;UBERON:0001049!4.61e-22!52;UBERON:0005068!4.61e-22!52;UBERON:0006241!4.61e-22!52;UBERON:0007135!4.61e-22!52;UBERON:0003080!9.08e-21!40;UBERON:0002780!1.78e-20!39;UBERON:0001890!1.78e-20!39;UBERON:0006240!1.78e-20!39;UBERON:0002346!2.82e-20!71;UBERON:0003075!2.82e-20!71;UBERON:0007284!2.82e-20!71;UBERON:0000955!1.32e-19!50;UBERON:0006238!1.32e-19!50;UBERON:0002616!2.17e-19!49;UBERON:0003056!4.02e-19!49;UBERON:0002020!4.42e-19!34;UBERON:0004121!1.19e-18!102;UBERON:0000924!1.19e-18!102;UBERON:0006601!1.19e-18!102;UBERON:0000033!3.74e-17!63;UBERON:0002791!3.45e-15!29;UBERON:0003528!3.45e-15!29;UBERON:0001893!3.45e-15!29;UBERON:0000956!1.60e-10!21;UBERON:0001869!1.60e-10!21;UBERON:0000203!1.60e-10!21;UBERON:0000153!1.01e-08!94;UBERON:0007811!1.53e-08!86;UBERON:0002619!4.05e-08!17;UBERON:0002021!2.76e-07!10;UBERON:0000411!2.76e-07!10;UBERON:0001950!2.76e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-32,73;UBERON:0001016,5.68e-31,75;UBERON:0000073,2.33e-29,54;UBERON:0001049,9.07e-28,52;UBERON:0005068,9.07e-28,52;UBERON:0006241,9.07e-28,52;UBERON:0007135,9.07e-28,52;UBERON:0003080,3.30e-26,40;UBERON:0002780,7.62e-26,39;UBERON:0001890,7.62e-26,39;UBERON:0006240,7.62e-26,39;UBERON:0002020,4.16e-24,34;UBERON:0002346,4.98e-24,64;UBERON:0003075,4.98e-24,64;UBERON:0007284,4.98e-24,64;UBERON:0000955,4.83e-23,47;UBERON:0006238,4.83e-23,47;UBERON:0002616,8.82e-23,46;UBERON:0004121,2.52e-22,95;UBERON:0000924,2.52e-22,95;UBERON:0006601,2.52e-22,95;UBERON:0003056,3.93e-22,49;UBERON:0010371,2.52e-19,73;UBERON:0003528,3.38e-19,29;UBERON:0002791,3.38e-19,29;UBERON:0001893,3.38e-19,29;UBERON:0000956,2.54e-13,21;UBERON:0001869,2.54e-13,21;UBERON:0000203,2.54e-13,21;UBERON:0010314,1.01e-12,92;UBERON:0002619,2.73e-10,17;UBERON:0002021,9.82e-09,10;UBERON:0000411,9.82e-09,10;UBERON:0001950,9.82e-09,10;UBERON:0001894,1.82e-07,10;UBERON:0006222,1.82e-07,10;UBERON:0002420,4.14e-07,8;UBERON:0007245,4.14e-07,8;UBERON:0010009,4.14e-07,8;UBERON:0010011,4.14e-07,8;UBERON:0000454,4.14e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9080892943265,36.5003775697703,37.3960528068646,0.338844532069132,0,0,0,0,1.49800055259202,9.98967593836042,8.70992743391212,12.6905582031789,12.8298226424343,29.4220513935918,28.9337788646614,9.30930074033651,7.76348315247715,9.19218786610021,5.50579404996943,2.68143409978894,1.99688493233117,25.9815986828482,24.9761267034578,25.5247551572812,5.58365998002762,6.75315132038016,10.5430790965999,30.3467443037878,27.4777343942269,33.3655008027288,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,1.90833859442749,0.913396434936424,1.61430848079241,0.150722640552623,0.823120949949934,0,0,0,0,0.323533699894818,0,0,0,0,0.628340120440365,0,0,0,0,2.09706895166752,1.37250180845588,11.1832373380449,5.21472960576829,6.39288643325826,4.98691306942944,5.353961681236,4.9901288286655,0,0,0,0,0.919608417733892,1.26043490863744,1.05493372485001,0.884474488967262,1.40925092313335,1.3118241438362,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,1.7535658594206,2.22437799380478,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0,0.414251545071004,0,0.180062061461015,0.710234206755631,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,5.67782861123144,19.2431625149262,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.570676878337677,0,0.658795818896044,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0,0,2.0863469104839,0,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.64096361229084,0,0,0.94652465824877,1.17131623288992,1.07711698866399,1.19484398976276,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,0.395287777946524,1.60660658210904,0.567760340833074,8.01295216502649,6.67836533349662,1.15479086080775,0,1.94224508923985,0.604647113929502,0.754420319023592,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0,0,0,2.38307724027652,1.8006109403131,2.8458910432206,4.71541477069503,7.44828981297549,10.167022603318,10.6956863391379,22.8348711835949,0,0,0,0,0,0,0.119372344003136,0,0,1.11255181206306,0,2.27025554759545,0.740778109478847,0,0,0,0,0,0,0,1.26534397432454,0.813277868507395,1.62008011232702,1.88179466413022,1.09181281873089,1.34864346384821,0.495920734352016,0,0,0,0,0.448549638131936,1.48912641411388,1.16670713006429,2.19571699912143,0.844780627453891,1.29092962510329,0.651021924219751,0.209718688851422,0,0,0,1.21635129174099,0.513554785824136,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,1.64836461840539,0,0,9.03602948187307,10.5874804396651,10.8850147553485,10.4830441229649,8.22099023724771,7.55393897389701,9.45031500324528,7.20513925158753,4.07828168085784,5.69536342927002,0.31136204275253,2.39414924040619,4.26834014385335,1.70174701947806,2.72497111416377,2.94149613520023,2.889207461421,2.26638562962784,1.92551525755089,2.52697211763797,3.8021894983536,2.45214243801899,2.34103768674706,2.81710670581425,3.38869266838118,1.42888107384922,2.66533949673168,3.8581844092741,1.64834360321323,2.35518272215036,2.74295401908332,2.12970967391205,0.953744759789284,2.18019624948493,2.25862512996793,2.96151127620868,1.46342378298218,2.10455769150274,3.12349461845482,2.24456908663095,3.08451047122853,3.44765688314472,3.27384834535751,2.47898945897546,3.66522560864169,6.24526444844865,1.40358965067245,3.65280791882107,1.72159498861959,0.441182838239031,0.463735671240843 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9080892943265,36.5003775697703,37.3960528068646,0.338844532069132,0,0,0,0,1.49800055259202,9.98967593836042,8.70992743391212,12.6905582031789,12.8298226424343,29.4220513935918,28.9337788646614,9.30930074033651,7.76348315247715,9.19218786610021,5.50579404996943,2.68143409978894,1.99688493233117,25.9815986828482,24.9761267034578,25.5247551572812,5.58365998002762,6.75315132038016,10.5430790965999,30.3467443037878,27.4777343942269,33.3655008027288,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,1.90833859442749,0.913396434936424,1.61430848079241,0.150722640552623,0.823120949949934,0,0,0,0,0.323533699894818,0,0,0,0,0.628340120440365,0,0,0,0,2.09706895166752,1.37250180845588,11.1832373380449,5.21472960576829,6.39288643325826,4.98691306942944,5.353961681236,4.9901288286655,0,0,0,0,0.919608417733892,1.26043490863744,1.05493372485001,0.884474488967262,1.40925092313335,1.3118241438362,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,1.7535658594206,2.22437799380478,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0,0.414251545071004,0,0.180062061461015,0.710234206755631,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,5.67782861123144,19.2431625149262,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.570676878337677,0,0.658795818896044,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0,0,2.0863469104839,0,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.64096361229084,0,0,0.94652465824877,1.17131623288992,1.07711698866399,1.19484398976276,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,0.395287777946524,1.60660658210904,0.567760340833074,8.01295216502649,6.67836533349662,1.15479086080775,0,1.94224508923985,0.604647113929502,0.754420319023592,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0,0,0,2.38307724027652,1.8006109403131,2.8458910432206,4.71541477069503,7.44828981297549,10.167022603318,10.6956863391379,22.8348711835949,0,0,0,0,0,0,0.119372344003136,0,0,1.11255181206306,0,2.27025554759545,0.740778109478847,0,0,0,0,0,0,0,1.26534397432454,0.813277868507395,1.62008011232702,1.88179466413022,1.09181281873089,1.34864346384821,0.495920734352016,0,0,0,0,0.448549638131936,1.48912641411388,1.16670713006429,2.19571699912143,0.844780627453891,1.29092962510329,0.651021924219751,0.209718688851422,0,0,0,1.21635129174099,0.513554785824136,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,1.64836461840539,0,0,9.03602948187307,10.5874804396651,10.8850147553485,10.4830441229649,8.22099023724771,7.55393897389701,9.45031500324528,7.20513925158753,4.07828168085784,5.69536342927002,0.31136204275253,2.39414924040619,4.26834014385335,1.70174701947806,2.72497111416377,2.94149613520023,2.889207461421,2.26638562962784,1.92551525755089,2.52697211763797,3.8021894983536,2.45214243801899,2.34103768674706,2.81710670581425,3.38869266838118,1.42888107384922,2.66533949673168,3.8581844092741,1.64834360321323,2.35518272215036,2.74295401908332,2.12970967391205,0.953744759789284,2.18019624948493,2.25862512996793,2.96151127620868,1.46342378298218,2.10455769150274,3.12349461845482,2.24456908663095,3.08451047122853,3.44765688314472,3.27384834535751,2.47898945897546,3.66522560864169,6.24526444844865,1.40358965067245,3.65280791882107,1.72159498861959,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Ly6h | |short_description=p3@Ly6h | ||
}} | }} |
Latest revision as of 23:49, 26 September 2015
Short description: | p3@Ly6h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ly6h_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 128bp_to_NM_011837, uc007wgv.2_5end |
EntrezGene: | Ly6h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.34e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.34e-20 | 23 |
neuron | 2.06e-18 | 33 |
neuronal stem cell | 2.06e-18 | 33 |
neuroblast | 2.06e-18 | 33 |
electrically signaling cell | 2.06e-18 | 33 |
electrically responsive cell | 1.01e-13 | 39 |
electrically active cell | 1.01e-13 | 39 |
neural cell | 1.89e-13 | 43 |
ectodermal cell | 7.22e-13 | 44 |
neurectodermal cell | 7.22e-13 | 44 |