FFCP PHASE1:Mm9::chr7:17501357..17501384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=741 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:17501357..17501384,- | |||
|description=CAGE_peak_at_chr7:17501357..17501384,- | |description=CAGE_peak_at_chr7:17501357..17501384,- | ||
|id=chr7:17501357..17501384,- | |id=chr7:17501357..17501384,- | ||
|ontology_enrichment_celltype=CL:0000117!9.28e-08!23;CL:0000337!9.28e-08!23;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39;CL:0000055!4.01e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-08,23;CL:0000337,1.83e-08,23;CL:0000393,8.16e-08,39;CL:0000211,8.16e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.76e-15!73;UBERON:0005743!5.76e-15!73;UBERON:0000073!8.65e-15!75;UBERON:0001016!8.65e-15!75;UBERON:0001049!7.71e-14!52;UBERON:0005068!7.71e-14!52;UBERON:0006241!7.71e-14!52;UBERON:0007135!7.71e-14!52;UBERON:0000955!4.88e-12!50;UBERON:0006238!4.88e-12!50;UBERON:0002616!1.07e-11!49;UBERON:0002020!1.51e-11!34;UBERON:0002346!8.15e-11!71;UBERON:0003075!8.15e-11!71;UBERON:0007284!8.15e-11!71;UBERON:0000033!7.99e-10!63;UBERON:0003080!8.33e-10!40;UBERON:0002780!2.54e-09!39;UBERON:0001890!2.54e-09!39;UBERON:0006240!2.54e-09!39;UBERON:0004121!2.55e-09!102;UBERON:0000924!2.55e-09!102;UBERON:0006601!2.55e-09!102;UBERON:0002791!8.28e-09!29;UBERON:0003528!8.28e-09!29;UBERON:0001893!8.28e-09!29;UBERON:0003056!4.74e-08!49;UBERON:0002619!3.88e-07!17;UBERON:0002021!3.92e-07!10;UBERON:0000411!3.92e-07!10;UBERON:0001950!3.92e-07!10;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.49e-17,73;UBERON:0000073,2.25e-17,54;UBERON:0001049,1.25e-16,52;UBERON:0005068,1.25e-16,52;UBERON:0006241,1.25e-16,52;UBERON:0007135,1.25e-16,52;UBERON:0001016,1.79e-16,75;UBERON:0002020,3.32e-14,34;UBERON:0000955,4.51e-13,47;UBERON:0006238,4.51e-13,47;UBERON:0002616,1.16e-12,46;UBERON:0002346,1.60e-12,64;UBERON:0003075,1.60e-12,64;UBERON:0007284,1.60e-12,64;UBERON:0003080,2.10e-11,40;UBERON:0002780,8.17e-11,39;UBERON:0001890,8.17e-11,39;UBERON:0006240,8.17e-11,39;UBERON:0003528,8.31e-11,29;UBERON:0002791,8.31e-11,29;UBERON:0001893,8.31e-11,29;UBERON:0010314,1.25e-10,92;UBERON:0004121,1.38e-10,95;UBERON:0000924,1.38e-10,95;UBERON:0006601,1.38e-10,95;UBERON:0010371,1.94e-10,73;UBERON:0003056,1.34e-08,49;UBERON:0002021,1.97e-08,10;UBERON:0000411,1.97e-08,10;UBERON:0001950,1.97e-08,10;UBERON:0000956,3.05e-08,21;UBERON:0001869,3.05e-08,21;UBERON:0000203,3.05e-08,21;UBERON:0002619,5.01e-08,17 | |||
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| ||
|short_description=p@chr7:17501357..17501384,- | |short_description=p@chr7:17501357..17501384,- | ||
}} | }} |
Latest revision as of 16:40, 4 August 2015
Short description: | p@chr7:17501357..17501384, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:17501357..17501384, - |
Coexpression cluster: | MCL_coexpression_mm9:741 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-08 | 23 |
electrically responsive cell | 8.16e-08 | 39 |
electrically active cell | 8.16e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.49e-17 | 73 |
regional part of nervous system | 2.25e-17 | 54 |
neural tube | 1.25e-16 | 52 |
neural rod | 1.25e-16 | 52 |
future spinal cord | 1.25e-16 | 52 |
neural keel | 1.25e-16 | 52 |
nervous system | 1.79e-16 | 75 |
gray matter | 3.32e-14 | 34 |
brain | 4.51e-13 | 47 |
future brain | 4.51e-13 | 47 |
regional part of brain | 1.16e-12 | 46 |
neurectoderm | 1.60e-12 | 64 |
neural plate | 1.60e-12 | 64 |
presumptive neural plate | 1.60e-12 | 64 |
anterior neural tube | 2.10e-11 | 40 |
regional part of forebrain | 8.17e-11 | 39 |
forebrain | 8.17e-11 | 39 |
future forebrain | 8.17e-11 | 39 |
brain grey matter | 8.31e-11 | 29 |
regional part of telencephalon | 8.31e-11 | 29 |
telencephalon | 8.31e-11 | 29 |
structure with developmental contribution from neural crest | 1.25e-10 | 92 |
ectoderm-derived structure | 1.38e-10 | 95 |
ectoderm | 1.38e-10 | 95 |
presumptive ectoderm | 1.38e-10 | 95 |
ecto-epithelium | 1.94e-10 | 73 |
pre-chordal neural plate | 1.34e-08 | 49 |
occipital lobe | 1.97e-08 | 10 |
visual cortex | 1.97e-08 | 10 |
neocortex | 1.97e-08 | 10 |
cerebral cortex | 3.05e-08 | 21 |
cerebral hemisphere | 3.05e-08 | 21 |
pallium | 3.05e-08 | 21 |
regional part of cerebral cortex | 5.01e-08 | 17 |