FFCP PHASE1:Mm9::chr15:73253610..73253648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14083 | |EntrezGene=14083 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P34152,F8WI77,E9QMQ8 | |UniProt=P34152,F8WI77,E9QMQ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000057684,ENSMUST00000068756,ENSMUST00000080736,ENSMUST00000110033,ENSMUST00000110036,ENSMUST00000170939,NM_001130409,NM_007982,uc007wbw.2,uc007wbx.2,uc007wbz.2,uc007wca.1,uc011ztu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000057684,ENSMUST00000068756,ENSMUST00000080736,ENSMUST00000110033,ENSMUST00000110036,ENSMUST00000170939,NM_001130409,NM_007982,uc007wbw.2,uc007wbx.2,uc007wbz.2,uc007wca.1,uc011ztu.1_5end | ||
|cluster_id=chr15:73253610..73253648,- | |||
|description=CAGE_peak_2_at_Ptk2_5end | |description=CAGE_peak_2_at_Ptk2_5end | ||
|id=chr15:73253610..73253648,- | |id=chr15:73253610..73253648,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!9.98e-12!49;UBERON:0000468!2.93e-11!333;UBERON:0000956!7.26e-11!21;UBERON:0001869!7.26e-11!21;UBERON:0000203!7.26e-11!21;UBERON:0002780!1.45e-10!39;UBERON:0001890!1.45e-10!39;UBERON:0006240!1.45e-10!39;UBERON:0003080!2.46e-10!40;UBERON:0002791!6.61e-10!29;UBERON:0003528!6.61e-10!29;UBERON:0001893!6.61e-10!29;UBERON:0002020!1.92e-09!34;UBERON:0004121!2.12e-09!102;UBERON:0000924!2.12e-09!102;UBERON:0006601!2.12e-09!102;UBERON:0000033!4.06e-09!63;UBERON:0000922!4.58e-09!328;UBERON:0002619!2.40e-08!17;UBERON:0001017!3.04e-08!73;UBERON:0005743!3.04e-08!73;UBERON:0002346!5.27e-08!71;UBERON:0003075!5.27e-08!71;UBERON:0007284!5.27e-08!71;UBERON:0000073!6.98e-08!75;UBERON:0001016!6.98e-08!75;UBERON:0002021!9.73e-08!10;UBERON:0000411!9.73e-08!10;UBERON:0001950!9.73e-08!10;UBERON:0000955!2.74e-07!50;UBERON:0006238!2.74e-07!50;UBERON:0001049!2.75e-07!52;UBERON:0005068!2.75e-07!52;UBERON:0006241!2.75e-07!52;UBERON:0007135!2.75e-07!52;UBERON:0002616!7.63e-07!49 | |ontology_enrichment_uberon=UBERON:0003056!9.98e-12!49;UBERON:0000468!2.93e-11!333;UBERON:0000956!7.26e-11!21;UBERON:0001869!7.26e-11!21;UBERON:0000203!7.26e-11!21;UBERON:0002780!1.45e-10!39;UBERON:0001890!1.45e-10!39;UBERON:0006240!1.45e-10!39;UBERON:0003080!2.46e-10!40;UBERON:0002791!6.61e-10!29;UBERON:0003528!6.61e-10!29;UBERON:0001893!6.61e-10!29;UBERON:0002020!1.92e-09!34;UBERON:0004121!2.12e-09!102;UBERON:0000924!2.12e-09!102;UBERON:0006601!2.12e-09!102;UBERON:0000033!4.06e-09!63;UBERON:0000922!4.58e-09!328;UBERON:0002619!2.40e-08!17;UBERON:0001017!3.04e-08!73;UBERON:0005743!3.04e-08!73;UBERON:0002346!5.27e-08!71;UBERON:0003075!5.27e-08!71;UBERON:0007284!5.27e-08!71;UBERON:0000073!6.98e-08!75;UBERON:0001016!6.98e-08!75;UBERON:0002021!9.73e-08!10;UBERON:0000411!9.73e-08!10;UBERON:0001950!9.73e-08!10;UBERON:0000955!2.74e-07!50;UBERON:0006238!2.74e-07!50;UBERON:0001049!2.75e-07!52;UBERON:0005068!2.75e-07!52;UBERON:0006241!2.75e-07!52;UBERON:0007135!2.75e-07!52;UBERON:0002616!7.63e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.08e-11,49;UBERON:0000956,8.20e-11,21;UBERON:0001869,8.20e-11,21;UBERON:0000203,8.20e-11,21;UBERON:0010371,1.08e-10,73;UBERON:0002780,1.58e-10,39;UBERON:0001890,1.58e-10,39;UBERON:0006240,1.58e-10,39;UBERON:0004121,1.66e-10,95;UBERON:0000924,1.66e-10,95;UBERON:0006601,1.66e-10,95;UBERON:0003080,2.68e-10,40;UBERON:0003528,7.30e-10,29;UBERON:0002791,7.30e-10,29;UBERON:0001893,7.30e-10,29;UBERON:0002020,2.10e-09,34;UBERON:0002346,2.44e-09,64;UBERON:0003075,2.44e-09,64;UBERON:0007284,2.44e-09,64;UBERON:0000922,6.43e-09,320;UBERON:0002619,2.71e-08,17;UBERON:0001017,3.22e-08,73;UBERON:0000955,4.55e-08,47;UBERON:0006238,4.55e-08,47;UBERON:0001016,7.38e-08,75;UBERON:0002021,9.63e-08,10;UBERON:0000411,9.63e-08,10;UBERON:0001950,9.63e-08,10;UBERON:0002616,1.36e-07,46;UBERON:0001049,2.92e-07,52;UBERON:0005068,2.92e-07,52;UBERON:0006241,2.92e-07,52;UBERON:0007135,2.92e-07,52;UBERON:0010314,4.38e-07,92;UBERON:0000073,7.68e-07,54 | |||
|phase1_expression=6.56610273129655,1.74487703819681,0.909998478779072,2.72217790176147,2.50447864973174,2.68606835059024,1.40167584357315,1.29123323441576,0.281577444303333,0.70219357896598,1.02730780935303,0.717949430958028,1.36960583944965,1.48614684112296,1.99865857089398,1.21485160433896,0.699561878128147,0.788655413395594,1.64537320326887,0,4.42225108785563,0,0,1.91990907352088,0.91763712426868,0.57423196411502,2.15380998079537,1.07735616342945,1.71021077510736,3.52842181663903,1.99557459589774,4.44521471421742,2.46025915033828,0,2.59966457776147,5.31950865147176,3.26670970019791,0,0.7813353445238,0.523523743973798,0,0,0,6.04304726282771,4.8660926985367,6.9747765821439,1.56478268869608,1.96222640742402,2.19686182734472,0.777719596297134,2.09979632438044,5.75010257459886,1.00669563634642,0.725362142011344,0,1.80081605225163,4.01146815914259,0.515672092277442,8.9019242778223,7.40587370980846,11.4089652631112,3.04960078862219,1.77858959222228,0.899899717281399,0,0,1.49800055259202,1.53687322128622,20.4268536247701,16.8757422914613,14.7227472945967,3.71346279724945,3.09215957332259,13.4739879136449,13.9934387686625,22.9804696652505,3.30347642998166,4.59674417106676,2.61131106535614,5.53922408466814,5.21479568533735,4.68822033501084,3.90856198601933,2.8138130501584,5.19514042441154,6.77645746589436,5.69486723196412,6.33758115806022,3.55913108665965,3.55186332501892,6.08715426273523,3.44169550792555,0.679971333707751,3.2382191498269,1.29955283489534,2.24013443548668,3.08977724289854,4.77204903218562,3.63700406444016,2.82671659608272,4.78867627240714,3.84979432242953,2.54805239706646,7.11066703153331,3.46385665617943,1.77351905832569,3.0331466700887,2.74041311325744,1.03575153458869,3.41416919849097,5.55153045651635,4.26251669636998,2.30615497256059,3.01445281105245,4.70354828542819,3.01599819191221,2.96633961281249,2.89198713839823,1.76922110389975,4.85300549842228,2.87093973998512,1.93950101254089,1.86391761218122,2.63502717310392,3.35114730901528,1.53274233125155,0.11981512450592,0,0,4.34392854273986,6.8625090422794,13.8219787324151,10.2556348913443,13.0414883238469,3.53239675751252,9.24775199486219,6.11036183101898,1.99051152976149,3.53811861807145,3.36706969418358,7.28674480591141,5.74755261083682,5.58192602396583,7.38453607395004,7.00775941258677,6.66191345481219,6.65282244374075,6.20888089773638,7.97601573851516,8.13156144721623,9.85326295318113,6.57587197282724,11.9560317167007,6.268538997399,8.43706759272568,10.7478504081986,0,0,0,6.42089894860056,4.45599513964083,3.96136535214233,3.55117103377815,5.1158700254325,4.9365476123961,4.41814495025775,5.36546802799238,7.82327793860036,4.27855609775049,5.74586124276833,3.89130285820108,5.70179950958796,3.07370161407471,4.02619256281115,12.8276868624118,15.5385964692719,2.31293148088659,5.28901133327089,7.03851226766272,6.27039014023184,5.28356591420583,4.63872106633688,4.44756087689741,4.75564065281398,1.42358718463353,2.79988223030818,3.51869292320377,4.37704238490532,5.06906626509712,1.79763881730844,3.8904848977445,4.18196673834171,6.63837653335786,8.22589290790047,4.50830942692322,6.72049381889537,8.33995694820791,7.43439690837377,7.71485752915939,4.13308414342886,5.80895293013087,5.42947521255922,2.66807364378434,3.17005700860579,3.34150291692445,3.59779379815766,3.24576194221605,2.65294875727659,3.8193877767213,2.30156909960649,1.62135226775035,3.29473695825698,1.43768206527355,1.48856379067401,2.18426371180192,5.05157755894223,4.4849353380478,1.4473305640901,4.61882975416512,6.63219941196697,5.21487924614483,8.82674446030978,6.10194645550105,9.88286918906713,9.04565835366852,9.95181604074774,10.719189799221,8.63712289630222,9.40783135079174,9.66793556822854,6.73471429276993,5.64131328467895,3.01582567878545,1.63171705145613,3.93411418415229,6.89841865761831,3.05046120976805,4.10240903072711,4.75411341592359,3.7870639080656,6.62567260774139,8.19921363022941,5.38558494331997,6.93009514062401,6.90675889655422,6.22768367735431,5.26253912177363,3.50707029493574,5.13874111330481,13.4954952897159,5.10984306749767,4.80777129901589,9.28455668315384,4.94910368917606,3.98235415019888,6.06951590387454,4.53485335447127,3.39489143560617,3.2483208216885,3.3817866273832,5.16856586336442,5.08947221268508,2.85197902707777,3.47640433729398,4.21674434299995,2.06271086496374,4.76615448055303,8.28281032544027,4.91562998374467,7.28745919107414,6.91626911204867,6.95638388648075,5.59466670047211,3.34911444026059,3.98941903708308,7.83778662196135,3.30792597082443,4.9465875882444,7.26589920131575,8.38349656501366,5.84924485615369,6.72977688954751,2.04036585640896,3.15223013417866,1.02522528478712,6.3979929068599,6.11141940320049,2.63715839806567,1.50363650493128,1.37266903923914,1.01987057996313,0.839708713941948,1.10559979043539,0,6.16855187483214,6.30290348093231,6.15630442684267,6.06356058441959,5.67742665740062,5.66430254816247,4.29797969771747,3.92633912976044,5.4438288782553,6.83473244395618,0.56369293868419,7.17679421011098,5.79104716599842,7.77804753376191,5.941351879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|phase1_expression=6.56610273129655,1.74487703819681,0.909998478779072,2.72217790176147,2.50447864973174,2.68606835059024,1.40167584357315,1.29123323441576,0.281577444303333,0.70219357896598,1.02730780935303,0.717949430958028,1.36960583944965,1.48614684112296,1.99865857089398,1.21485160433896,0.699561878128147,0.788655413395594,1.64537320326887,0,4.42225108785563,0,0,1.91990907352088,0.91763712426868,0.57423196411502,2.15380998079537,1.07735616342945,1.71021077510736,3.52842181663903,1.99557459589774,4.44521471421742,2.46025915033828,0,2.59966457776147,5.31950865147176,3.26670970019791,0,0.7813353445238,0.523523743973798,0,0,0,6.04304726282771,4.8660926985367,6.9747765821439,1.56478268869608,1.96222640742402,2.19686182734472,0.777719596297134,2.09979632438044,5.75010257459886,1.00669563634642,0.725362142011344,0,1.80081605225163,4.01146815914259,0.515672092277442,8.9019242778223,7.40587370980846,11.4089652631112,3.04960078862219,1.77858959222228,0.899899717281399,0,0,1.49800055259202,1.53687322128622,20.4268536247701,16.8757422914613,14.7227472945967,3.71346279724945,3.09215957332259,13.4739879136449,13.9934387686625,22.9804696652505,3.30347642998166,4.59674417106676,2.61131106535614,5.53922408466814,5.21479568533735,4.68822033501084,3.90856198601933,2.8138130501584,5.19514042441154,6.77645746589436,5.69486723196412,6.33758115806022,3.55913108665965,3.55186332501892,6.08715426273523,3.44169550792555,0.679971333707751,3.2382191498269,1.29955283489534,2.24013443548668,3.08977724289854,4.77204903218562,3.63700406444016,2.82671659608272,4.78867627240714,3.84979432242953,2.54805239706646,7.11066703153331,3.46385665617943,1.77351905832569,3.0331466700887,2.74041311325744,1.03575153458869,3.41416919849097,5.55153045651635,4.26251669636998,2.30615497256059,3.01445281105245,4.70354828542819,3.01599819191221,2.96633961281249,2.89198713839823,1.76922110389975,4.85300549842228,2.87093973998512,1.93950101254089,1.86391761218122,2.63502717310392,3.35114730901528,1.53274233125155,0.11981512450592,0,0,4.34392854273986,6.8625090422794,13.8219787324151,10.2556348913443,13.0414883238469,3.53239675751252,9.24775199486219,6.11036183101898,1.99051152976149,3.53811861807145,3.36706969418358,7.28674480591141,5.74755261083682,5.58192602396583,7.38453607395004,7.00775941258677,6.66191345481219,6.65282244374075,6.20888089773638,7.97601573851516,8.13156144721623,9.85326295318113,6.57587197282724,11.9560317167007,6.268538997399,8.43706759272568,10.7478504081986,0,0,0,6.42089894860056,4.45599513964083,3.96136535214233,3.55117103377815,5.1158700254325,4.9365476123961,4.41814495025775,5.36546802799238,7.82327793860036,4.27855609775049,5.74586124276833,3.89130285820108,5.70179950958796,3.07370161407471,4.02619256281115,12.8276868624118,15.5385964692719,2.31293148088659,5.28901133327089,7.03851226766272,6.27039014023184,5.28356591420583,4.63872106633688,4.44756087689741,4.75564065281398,1.42358718463353,2.79988223030818,3.51869292320377,4.37704238490532,5.06906626509712,1.79763881730844,3.8904848977445,4.18196673834171,6.63837653335786,8.22589290790047,4.50830942692322,6.72049381889537,8.33995694820791,7.43439690837377,7.71485752915939,4.13308414342886,5.80895293013087,5.42947521255922,2.66807364378434,3.17005700860579,3.34150291692445,3.59779379815766,3.24576194221605,2.65294875727659,3.8193877767213,2.30156909960649,1.62135226775035,3.29473695825698,1.43768206527355,1.48856379067401,2.18426371180192,5.05157755894223,4.4849353380478,1.4473305640901,4.61882975416512,6.63219941196697,5.21487924614483,8.82674446030978,6.10194645550105,9.88286918906713,9.04565835366852,9.95181604074774,10.719189799221,8.63712289630222,9.40783135079174,9.66793556822854,6.73471429276993,5.64131328467895,3.01582567878545,1.63171705145613,3.93411418415229,6.89841865761831,3.05046120976805,4.10240903072711,4.75411341592359,3.7870639080656,6.62567260774139,8.19921363022941,5.38558494331997,6.93009514062401,6.90675889655422,6.22768367735431,5.26253912177363,3.50707029493574,5.13874111330481,13.4954952897159,5.10984306749767,4.80777129901589,9.28455668315384,4.94910368917606,3.98235415019888,6.06951590387454,4.53485335447127,3.39489143560617,3.2483208216885,3.3817866273832,5.16856586336442,5.08947221268508,2.85197902707777,3.47640433729398,4.21674434299995,2.06271086496374,4.76615448055303,8.28281032544027,4.91562998374467,7.28745919107414,6.91626911204867,6.95638388648075,5.59466670047211,3.34911444026059,3.98941903708308,7.83778662196135,3.30792597082443,4.9465875882444,7.26589920131575,8.38349656501366,5.84924485615369,6.72977688954751,2.04036585640896,3.15223013417866,1.02522528478712,6.3979929068599,6.11141940320049,2.63715839806567,1.50363650493128,1.37266903923914,1.01987057996313,0.839708713941948,1.10559979043539,0,6.16855187483214,6.30290348093231,6.15630442684267,6.06356058441959,5.67742665740062,5.66430254816247,4.29797969771747,3.92633912976044,5.4438288782553,6.83473244395618,0.56369293868419,7.17679421011098,5.79104716599842,7.77804753376191,5.941351879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| ||
|short_description=p2@Ptk2 | |short_description=p2@Ptk2 | ||
}} | }} |
Latest revision as of 22:50, 26 September 2015
Short description: | p2@Ptk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptk2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000057684, ENSMUST00000068756, ENSMUST00000080736, ENSMUST00000110033, ENSMUST00000110036, ENSMUST00000170939, NM_001130409, NM_007982, uc007wbw.2, uc007wbx.2, uc007wbz.2, uc007wca.1, uc011ztu.1_5end |
EntrezGene: | Ptk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.08e-11 | 49 |
cerebral cortex | 8.20e-11 | 21 |
cerebral hemisphere | 8.20e-11 | 21 |
pallium | 8.20e-11 | 21 |
ecto-epithelium | 1.08e-10 | 73 |
regional part of forebrain | 1.58e-10 | 39 |
forebrain | 1.58e-10 | 39 |
future forebrain | 1.58e-10 | 39 |
ectoderm-derived structure | 1.66e-10 | 95 |
ectoderm | 1.66e-10 | 95 |
presumptive ectoderm | 1.66e-10 | 95 |
anterior neural tube | 2.68e-10 | 40 |
brain grey matter | 7.30e-10 | 29 |
regional part of telencephalon | 7.30e-10 | 29 |
telencephalon | 7.30e-10 | 29 |
gray matter | 2.10e-09 | 34 |
neurectoderm | 2.44e-09 | 64 |
neural plate | 2.44e-09 | 64 |
presumptive neural plate | 2.44e-09 | 64 |
embryo | 6.43e-09 | 320 |
regional part of cerebral cortex | 2.71e-08 | 17 |
central nervous system | 3.22e-08 | 73 |
brain | 4.55e-08 | 47 |
future brain | 4.55e-08 | 47 |
nervous system | 7.38e-08 | 75 |
occipital lobe | 9.63e-08 | 10 |
visual cortex | 9.63e-08 | 10 |
neocortex | 9.63e-08 | 10 |
regional part of brain | 1.36e-07 | 46 |
neural tube | 2.92e-07 | 52 |
neural rod | 2.92e-07 | 52 |
future spinal cord | 2.92e-07 | 52 |
neural keel | 2.92e-07 | 52 |
structure with developmental contribution from neural crest | 4.38e-07 | 92 |
regional part of nervous system | 7.68e-07 | 54 |