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FFCP PHASE1:Mm9::chr15:58720475..58720524,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75841
|EntrezGene=75841
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q7TMV1
|UniProt=Q7TMV1
|association_with_transcript=-259bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end
|association_with_transcript=-259bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end
|cluster_id=chr15:58720475..58720524,+
|description=CAGE_peak_3_at_Rnf139_5end
|description=CAGE_peak_3_at_Rnf139_5end
|id=chr15:58720475..58720524,+
|id=chr15:58720475..58720524,+
|ontology_enrichment_celltype=CL:0000117!2.21e-11!23;CL:0000337!2.21e-11!23
|ontology_enrichment_celltype=CL:0000117!2.21e-11!23;CL:0000337!2.21e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-11,23;CL:0000337,2.21e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.80e-16!63;UBERON:0000955!1.29e-15!50;UBERON:0006238!1.29e-15!50;UBERON:0001049!3.19e-15!52;UBERON:0005068!3.19e-15!52;UBERON:0006241!3.19e-15!52;UBERON:0007135!3.19e-15!52;UBERON:0002616!3.37e-15!49;UBERON:0003056!2.20e-14!49;UBERON:0007811!5.97e-14!86;UBERON:0000153!6.24e-14!94;UBERON:0003080!2.35e-13!40;UBERON:0002020!3.01e-13!34;UBERON:0002780!4.67e-13!39;UBERON:0001890!4.67e-13!39;UBERON:0006240!4.67e-13!39;UBERON:0000073!7.00e-13!75;UBERON:0001016!7.00e-13!75;UBERON:0002346!1.05e-12!71;UBERON:0003075!1.05e-12!71;UBERON:0007284!1.05e-12!71;UBERON:0001017!1.76e-12!73;UBERON:0005743!1.76e-12!73;UBERON:0002791!3.22e-12!29;UBERON:0003528!3.22e-12!29;UBERON:0001893!3.22e-12!29;UBERON:0004121!7.14e-10!102;UBERON:0000924!7.14e-10!102;UBERON:0006601!7.14e-10!102;UBERON:0000956!1.27e-08!21;UBERON:0001869!1.27e-08!21;UBERON:0000203!1.27e-08!21;UBERON:0000025!6.57e-07!114
|ontology_enrichment_uberon=UBERON:0000033!1.80e-16!63;UBERON:0000955!1.29e-15!50;UBERON:0006238!1.29e-15!50;UBERON:0001049!3.19e-15!52;UBERON:0005068!3.19e-15!52;UBERON:0006241!3.19e-15!52;UBERON:0007135!3.19e-15!52;UBERON:0002616!3.37e-15!49;UBERON:0003056!2.20e-14!49;UBERON:0007811!5.97e-14!86;UBERON:0000153!6.24e-14!94;UBERON:0003080!2.35e-13!40;UBERON:0002020!3.01e-13!34;UBERON:0002780!4.67e-13!39;UBERON:0001890!4.67e-13!39;UBERON:0006240!4.67e-13!39;UBERON:0000073!7.00e-13!75;UBERON:0001016!7.00e-13!75;UBERON:0002346!1.05e-12!71;UBERON:0003075!1.05e-12!71;UBERON:0007284!1.05e-12!71;UBERON:0001017!1.76e-12!73;UBERON:0005743!1.76e-12!73;UBERON:0002791!3.22e-12!29;UBERON:0003528!3.22e-12!29;UBERON:0001893!3.22e-12!29;UBERON:0004121!7.14e-10!102;UBERON:0000924!7.14e-10!102;UBERON:0006601!7.14e-10!102;UBERON:0000956!1.27e-08!21;UBERON:0001869!1.27e-08!21;UBERON:0000203!1.27e-08!21;UBERON:0000025!6.57e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-16,54;UBERON:0001049,3.19e-15,52;UBERON:0005068,3.19e-15,52;UBERON:0006241,3.19e-15,52;UBERON:0007135,3.19e-15,52;UBERON:0002346,5.33e-15,64;UBERON:0003075,5.33e-15,64;UBERON:0007284,5.33e-15,64;UBERON:0003056,2.20e-14,49;UBERON:0000955,6.14e-14,47;UBERON:0006238,6.14e-14,47;UBERON:0002616,1.56e-13,46;UBERON:0003080,2.35e-13,40;UBERON:0002020,3.01e-13,34;UBERON:0010371,4.65e-13,73;UBERON:0002780,4.67e-13,39;UBERON:0001890,4.67e-13,39;UBERON:0006240,4.67e-13,39;UBERON:0001016,7.00e-13,75;UBERON:0001017,1.76e-12,73;UBERON:0003528,3.22e-12,29;UBERON:0002791,3.22e-12,29;UBERON:0001893,3.22e-12,29;UBERON:0004121,2.90e-11,95;UBERON:0000924,2.90e-11,95;UBERON:0006601,2.90e-11,95;UBERON:0010314,5.35e-11,92;UBERON:0000956,1.27e-08,21;UBERON:0001869,1.27e-08,21;UBERON:0000203,1.27e-08,21;UBERON:0000025,6.59e-07,114
|phase1_expression=7.36684696682052,4.18770489167233,3.18499467572675,3.0246421130683,3.00537437967808,3.86122325397347,3.27057696833736,6.45616617207881,1.40788722151667,2.34064526321993,3.76679530096111,3.82906363177615,6.33442700745461,7.95525662012876,10.3264026162855,7.08663435864391,16.0899231969474,9.77932712610537,12.066070157305,8.48779303596061,20.8356060870121,4.36880185283895,2.61199789138935,2.55987876469451,2.98232065387321,2.8711598205751,1.29228598847722,1.29282739611533,2.66032787238923,2.52030129759931,2.66076612786366,5.08024538767705,6.76571266343027,0,5.48818077527422,3.82339684324532,4.69589519403449,8.78916424547506,5.4693474116666,5.75876118371178,6.47054636834116,8.87959130445979,8.25367600152961,6.92432498865675,5.27160042341476,7.15832333430558,3.9119567217402,3.2703773457067,2.63623419281366,2.3331587888914,5.31948402176378,2.87505128729943,7.3824346665404,4.35217285206807,6.72187598284928,2.31533492432352,6.01720223871389,2.57836046138721,13.1505699558739,8.99284664762456,7.60597684207415,1.0165335962074,1.77858959222228,1.7997994345628,3.9554654502679,3.5524005747305,2.09720077362883,1.53687322128622,13.9980976616445,9.99043943654511,12.8298226424343,6.56997264128748,7.06779331045163,11.8816075238505,8.53024692062304,14.7075005857603,12.1127469099328,9.06580100404833,8.90917892886212,8.83638127792299,8.32537556781928,10.4182674111352,8.37548997004143,6.19038871034848,8.70950012327818,5.00868595305235,6.54909731675874,9.87917062874093,6.13382165998791,6.42358260907677,2.6087803983151,0,2.03991400112325,1.07940638327563,1.94932925234301,0.896053774194671,4.0728881838208,5.11290967734173,5.45550609666024,4.94675404314476,7.88723150749411,3.84979432242953,0,14.2213340630666,2.59789249213457,2.78695852022608,3.0331466700887,4.68153906848146,2.58937883647172,4.00793775475027,4.68410382268567,1.82679286987285,2.30615497256059,4.22023393547343,5.64425794251383,5.02666365318702,1.48316980640624,1.44599356919912,8.84610551949874,4.04417124868523,5.74187947997023,6.78825354389311,1.86391761218122,6.14839673724249,8.3778682725382,2.55457055208591,4.91242010474273,5.39912457894067,4.70159840170339,7.04016005202667,8.23501085073528,16.0837570704466,8.8650403298061,9.46147192122223,10.389402227978,7.94982189032012,8.86002465497752,4.85187185379363,2.27450482590307,5.05060454127538,6.11566081924707,6.66716102857071,4.68161537493908,6.17889753126432,7.00775941258677,7.55870949680614,7.96464658757695,4.9153640440413,6.25147179505242,5.67318240503458,5.27853372491847,6.1374805079721,5.00485048606076,7.66154766348766,3.70407845534298,5.57295947091781,0.702213187313235,1.54408744268829,4.54661599032948,4.55676699578104,5.8631514995274,4.32148947506436,5.20838418287463,3.73852040320067,3.39387648352232,3.95307706075693,3.48755421819505,5.13767506415546,5.26591519723137,5.74586124276833,5.91802309684747,6.57899943413995,5.04965265169416,4.83143107537338,7.57043814830858,11.5253165864799,2.97376904685418,1.58670339998127,3.62590025909898,4.87697010906921,3.35055399437443,3.83198696784351,2.2237804384487,2.09248188723815,1.89811624617805,1.81168850196412,1.75934646160189,3.97912944082302,2.9244613067868,3.59527763461689,3.6743468478698,1.99141273254367,4.93136542478012,4.11294645395024,2.25415471346161,4.68398054044223,5.04276466635827,5.75113723100612,5.1853960441891,4.72352473534727,3.29697328466887,1.97435462274881,2.66807364378434,4.00428253718626,6.09332884850929,5.62155280962134,5.27436315610108,5.54707467430559,5.85639459097266,4.31544206176216,4.53978634970099,3.29473695825698,7.18841032636773,2.97712758134803,4.99260276983297,3.78868316920668,3.04975602987251,4.3419916922703,4.24932337383191,6.44270800019648,5.37784422258685,4.75286240170527,3.28566347603903,6.86775655511445,7.37935286746643,4.68320754858717,4.88668946729192,6.64394068946325,4.78364305972461,2.62181303545181,5.35323443784276,5.35201516751593,0,5.98296252200581,2.95058563811422,3.31124095565679,8.18808008937739,7.14991288212439,7.37707254195039,6.05930225290495,3.78609863299508,3.90438744296638,3.44677436372478,2.62865677747807,3.56477878531831,5.94460714656548,1.61924280669958,2.33804686329049,3.95287777946523,7.71171159412337,3.40656204499845,7.47875535402472,10.0989914799217,4.45419332025846,1.32745138339963,3.8844901784797,3.02323556964751,0.943025398779491,2.36241514304618,3.99665692327106,1.55056975900933,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,3.09406629744561,4.42571487479924,7.20244376125241,4.65691261617916,7.28745919107414,5.32020700926821,4.99432689285798,6.74650984468696,5.78483403317739,2.81606049676452,1.48282449604674,1.32317038832977,2.63818004706368,4.84393280087717,4.58378229453985,4.53614907211919,3.77524069413641,2.91480836629851,8.71498919449395,7.34744787430767,4.95328483111734,4.62986318424279,6.78126445216888,7.92826520781946,6.40578884978263,5.26933132980952,5.03825228365169,5.2515990045681,3.81868247206045,5.06137589729817,6.09958401380546,3.88819226958485,2.50905955217362,3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|phase1_expression=7.36684696682052,4.18770489167233,3.18499467572675,3.0246421130683,3.00537437967808,3.86122325397347,3.27057696833736,6.45616617207881,1.40788722151667,2.34064526321993,3.76679530096111,3.82906363177615,6.33442700745461,7.95525662012876,10.3264026162855,7.08663435864391,16.0899231969474,9.77932712610537,12.066070157305,8.48779303596061,20.8356060870121,4.36880185283895,2.61199789138935,2.55987876469451,2.98232065387321,2.8711598205751,1.29228598847722,1.29282739611533,2.66032787238923,2.52030129759931,2.66076612786366,5.08024538767705,6.76571266343027,0,5.48818077527422,3.82339684324532,4.69589519403449,8.78916424547506,5.4693474116666,5.75876118371178,6.47054636834116,8.87959130445979,8.25367600152961,6.92432498865675,5.27160042341476,7.15832333430558,3.9119567217402,3.2703773457067,2.63623419281366,2.3331587888914,5.31948402176378,2.87505128729943,7.3824346665404,4.35217285206807,6.72187598284928,2.31533492432352,6.01720223871389,2.57836046138721,13.1505699558739,8.99284664762456,7.60597684207415,1.0165335962074,1.77858959222228,1.7997994345628,3.9554654502679,3.5524005747305,2.09720077362883,1.53687322128622,13.9980976616445,9.99043943654511,12.8298226424343,6.56997264128748,7.06779331045163,11.8816075238505,8.53024692062304,14.7075005857603,12.1127469099328,9.06580100404833,8.90917892886212,8.83638127792299,8.32537556781928,10.4182674111352,8.37548997004143,6.19038871034848,8.70950012327818,5.00868595305235,6.54909731675874,9.87917062874093,6.13382165998791,6.42358260907677,2.6087803983151,0,2.03991400112325,1.07940638327563,1.94932925234301,0.896053774194671,4.0728881838208,5.11290967734173,5.45550609666024,4.94675404314476,7.88723150749411,3.84979432242953,0,14.2213340630666,2.59789249213457,2.78695852022608,3.0331466700887,4.68153906848146,2.58937883647172,4.00793775475027,4.68410382268567,1.82679286987285,2.30615497256059,4.22023393547343,5.64425794251383,5.02666365318702,1.48316980640624,1.44599356919912,8.84610551949874,4.04417124868523,5.74187947997023,6.78825354389311,1.86391761218122,6.14839673724249,8.3778682725382,2.55457055208591,4.91242010474273,5.39912457894067,4.70159840170339,7.04016005202667,8.23501085073528,16.0837570704466,8.8650403298061,9.46147192122223,10.389402227978,7.94982189032012,8.86002465497752,4.85187185379363,2.27450482590307,5.05060454127538,6.11566081924707,6.66716102857071,4.68161537493908,6.17889753126432,7.00775941258677,7.55870949680614,7.96464658757695,4.9153640440413,6.25147179505242,5.67318240503458,5.27853372491847,6.1374805079721,5.00485048606076,7.66154766348766,3.70407845534298,5.57295947091781,0.702213187313235,1.54408744268829,4.54661599032948,4.55676699578104,5.8631514995274,4.32148947506436,5.20838418287463,3.73852040320067,3.39387648352232,3.95307706075693,3.48755421819505,5.13767506415546,5.26591519723137,5.74586124276833,5.91802309684747,6.57899943413995,5.04965265169416,4.83143107537338,7.57043814830858,11.5253165864799,2.97376904685418,1.58670339998127,3.62590025909898,4.87697010906921,3.35055399437443,3.83198696784351,2.2237804384487,2.09248188723815,1.89811624617805,1.81168850196412,1.75934646160189,3.97912944082302,2.9244613067868,3.59527763461689,3.6743468478698,1.99141273254367,4.93136542478012,4.11294645395024,2.25415471346161,4.68398054044223,5.04276466635827,5.75113723100612,5.1853960441891,4.72352473534727,3.29697328466887,1.97435462274881,2.66807364378434,4.00428253718626,6.09332884850929,5.62155280962134,5.27436315610108,5.54707467430559,5.85639459097266,4.31544206176216,4.53978634970099,3.29473695825698,7.18841032636773,2.97712758134803,4.99260276983297,3.78868316920668,3.04975602987251,4.3419916922703,4.24932337383191,6.44270800019648,5.37784422258685,4.75286240170527,3.28566347603903,6.86775655511445,7.37935286746643,4.68320754858717,4.88668946729192,6.64394068946325,4.78364305972461,2.62181303545181,5.35323443784276,5.35201516751593,0,5.98296252200581,2.95058563811422,3.31124095565679,8.18808008937739,7.14991288212439,7.37707254195039,6.05930225290495,3.78609863299508,3.90438744296638,3.44677436372478,2.62865677747807,3.56477878531831,5.94460714656548,1.61924280669958,2.33804686329049,3.95287777946523,7.71171159412337,3.40656204499845,7.47875535402472,10.0989914799217,4.45419332025846,1.32745138339963,3.8844901784797,3.02323556964751,0.943025398779491,2.36241514304618,3.99665692327106,1.55056975900933,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,3.09406629744561,4.42571487479924,7.20244376125241,4.65691261617916,7.28745919107414,5.32020700926821,4.99432689285798,6.74650984468696,5.78483403317739,2.81606049676452,1.48282449604674,1.32317038832977,2.63818004706368,4.84393280087717,4.58378229453985,4.53614907211919,3.77524069413641,2.91480836629851,8.71498919449395,7.34744787430767,4.95328483111734,4.62986318424279,6.78126445216888,7.92826520781946,6.40578884978263,5.26933132980952,5.03825228365169,5.2515990045681,3.81868247206045,5.06137589729817,6.09958401380546,3.88819226958485,2.50905955217362,3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|short_description=p3@Rnf139
|short_description=p3@Rnf139
}}
}}

Latest revision as of 20:41, 26 September 2015

Short description:p3@Rnf139
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf139_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -259bp_to_ENSMUST00000036904, NM_175226, uc007vtq.2_5end
EntrezGene:Rnf139
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rnf139

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D96.13
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.70
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F116.08
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C67.01
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G87.96
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G15.92
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G111.53
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G75.75
kidney, neonate N10.CNhs11206.758-6D55.19
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I410.10
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G5123.45
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I55.68
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E248.97
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F85.29
thymus, neonate N03.CNhs11137.2104-43C76.35
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D36.17
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G77.31
thymus, neonate N30.CNhs11132.1393-42G26.55
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.21e-1123
neuroblast (sensu Vertebrata)2.21e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.02e-1654
neural tube3.19e-1552
neural rod3.19e-1552
future spinal cord3.19e-1552
neural keel3.19e-1552
neurectoderm5.33e-1564
neural plate5.33e-1564
presumptive neural plate5.33e-1564
pre-chordal neural plate2.20e-1449
brain6.14e-1447
future brain6.14e-1447
regional part of brain1.56e-1346
anterior neural tube2.35e-1340
gray matter3.01e-1334
ecto-epithelium4.65e-1373
regional part of forebrain4.67e-1339
forebrain4.67e-1339
future forebrain4.67e-1339
nervous system7.00e-1375
central nervous system1.76e-1273
brain grey matter3.22e-1229
regional part of telencephalon3.22e-1229
telencephalon3.22e-1229
ectoderm-derived structure2.90e-1195
ectoderm2.90e-1195
presumptive ectoderm2.90e-1195
structure with developmental contribution from neural crest5.35e-1192
cerebral cortex1.27e-0821
cerebral hemisphere1.27e-0821
pallium1.27e-0821
tube6.59e-07114
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