FFCP PHASE1:Mm9::chr5:107760156..107760165,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114642 | |EntrezGene=114642 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8Z8 | |UniProt=G3X8Z8 | ||
|association_with_transcript=-12bp_to_ENSMUST00000031215_5end | |association_with_transcript=-12bp_to_ENSMUST00000031215_5end | ||
|cluster_id=chr5:107760156..107760165,+ | |||
|description=CAGE_peak_5_at_Brdt_5end | |description=CAGE_peak_5_at_Brdt_5end | ||
|id=chr5:107760156..107760165,+ | |id=chr5:107760156..107760165,+ | ||
|ontology_enrichment_celltype=CL:0000349!5.92e-08!3;CL:0000351!5.92e-08!3 | |ontology_enrichment_celltype=CL:0000349!5.92e-08!3;CL:0000351!5.92e-08!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!7.45e-39!14;UBERON:0004176!2.60e-38!17;UBERON:0009196!2.60e-38!17;UBERON:0009117!2.60e-38!17;UBERON:0003135!3.42e-36!15;UBERON:0000991!4.10e-36!18;UBERON:0005564!4.10e-36!18;UBERON:0003101!7.32e-34!16;UBERON:0000079!7.32e-34!16;UBERON:0003133!9.10e-27!24;UBERON:0005156!1.31e-24!26;UBERON:0000990!1.31e-24!26;UBERON:0002323!6.90e-17!37;UBERON:0004458!6.90e-17!37;UBERON:0003886!2.09e-16!38;UBERON:0002553!5.98e-16!39;UBERON:0000464!1.87e-10!57;UBERON:0000358!5.92e-08!3;UBERON:0000307!5.92e-08!3;UBERON:0000466!4.03e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.45e-26,14;UBERON:0003135,1.27e-24,15;UBERON:0003101,4.00e-23,16;UBERON:0000079,4.00e-23,16;UBERON:0004176,8.45e-22,17;UBERON:0009196,8.45e-22,17;UBERON:0009117,8.45e-22,17;UBERON:0000991,1.27e-20,18;UBERON:0005564,1.27e-20,18;UBERON:0003133,1.32e-15,24;UBERON:0005156,1.92e-14,26;UBERON:0000990,1.92e-14,26;UBERON:0002323,2.76e-10,37;UBERON:0004458,2.76e-10,37;UBERON:0003886,5.02e-10,38;UBERON:0002553,8.86e-10,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5858915852617,0.149516546043979,0,1.55560950675238,0.645799117388655,1.35164900392623,0.821500670520278,0.39061315453185,0.314578033277133,11.1128695579963,21.6022504693399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5858915852617,0.149516546043979,0,1.55560950675238,0.645799117388655,1.35164900392623,0.821500670520278,0.39061315453185,0.314578033277133,11.1128695579963,21.6022504693399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Brdt | |short_description=p5@Brdt | ||
}} | }} |
Latest revision as of 14:00, 1 October 2015
Short description: | p5@Brdt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Brdt_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -12bp_to_ENSMUST00000031215_5end |
EntrezGene: | Brdt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.45e-26 | 14 |
male reproductive organ | 1.27e-24 | 15 |
male organism | 4.00e-23 | 16 |
male reproductive system | 4.00e-23 | 16 |
external genitalia | 8.45e-22 | 17 |
indifferent external genitalia | 8.45e-22 | 17 |
indifferent gonad | 8.45e-22 | 17 |
gonad | 1.27e-20 | 18 |
gonad primordium | 1.27e-20 | 18 |
reproductive organ | 1.32e-15 | 24 |
reproductive structure | 1.92e-14 | 26 |
reproductive system | 1.92e-14 | 26 |
body cavity | 2.76e-10 | 37 |
body cavity or lining | 2.76e-10 | 37 |
body cavity precursor | 5.02e-10 | 38 |
anatomical cavity | 8.86e-10 | 39 |