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FFCP PHASE1:Mm9::chr15:101966608..101966653,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=223918
|EntrezGene=223918
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UIZ3,E9Q9B3,Q922G6
|UniProt=Q3UIZ3,E9Q9B3,Q922G6
|association_with_transcript=0bp_to_ENSMUST00000100176,ENSMUST00000139279,NM_001033277,uc007xur.2,uc011zzy.1_5end
|association_with_transcript=0bp_to_ENSMUST00000100176,ENSMUST00000139279,NM_001033277,uc007xur.2,uc011zzy.1_5end
|cluster_id=chr15:101966608..101966653,-
|description=CAGE_peak_1_at_Spryd3_5end
|description=CAGE_peak_1_at_Spryd3_5end
|id=chr15:101966608..101966653,-
|id=chr15:101966608..101966653,-
|ontology_enrichment_celltype=CL:0000117!6.31e-07!23;CL:0000337!6.31e-07!23
|ontology_enrichment_celltype=CL:0000117!6.31e-07!23;CL:0000337!6.31e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.31e-07,23;CL:0000337,6.31e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.14e-16!52;UBERON:0005068!7.14e-16!52;UBERON:0006241!7.14e-16!52;UBERON:0007135!7.14e-16!52;UBERON:0000955!6.84e-15!50;UBERON:0006238!6.84e-15!50;UBERON:0002616!1.98e-14!49;UBERON:0001017!4.77e-13!73;UBERON:0005743!4.77e-13!73;UBERON:0002020!6.71e-13!34;UBERON:0000073!1.69e-12!75;UBERON:0001016!1.69e-12!75;UBERON:0000033!9.69e-12!63;UBERON:0002791!2.53e-10!29;UBERON:0003528!2.53e-10!29;UBERON:0001893!2.53e-10!29;UBERON:0003080!4.63e-10!40;UBERON:0002780!1.79e-09!39;UBERON:0001890!1.79e-09!39;UBERON:0006240!1.79e-09!39;UBERON:0004121!8.80e-09!102;UBERON:0000924!8.80e-09!102;UBERON:0006601!8.80e-09!102;UBERON:0002346!1.49e-08!71;UBERON:0003075!1.49e-08!71;UBERON:0007284!1.49e-08!71;UBERON:0002619!9.27e-08!17;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0007023!1.20e-07!51;UBERON:0003056!3.00e-07!49;UBERON:0003076!3.59e-07!12;UBERON:0003057!3.59e-07!12
|ontology_enrichment_uberon=UBERON:0001049!7.14e-16!52;UBERON:0005068!7.14e-16!52;UBERON:0006241!7.14e-16!52;UBERON:0007135!7.14e-16!52;UBERON:0000955!6.84e-15!50;UBERON:0006238!6.84e-15!50;UBERON:0002616!1.98e-14!49;UBERON:0001017!4.77e-13!73;UBERON:0005743!4.77e-13!73;UBERON:0002020!6.71e-13!34;UBERON:0000073!1.69e-12!75;UBERON:0001016!1.69e-12!75;UBERON:0000033!9.69e-12!63;UBERON:0002791!2.53e-10!29;UBERON:0003528!2.53e-10!29;UBERON:0001893!2.53e-10!29;UBERON:0003080!4.63e-10!40;UBERON:0002780!1.79e-09!39;UBERON:0001890!1.79e-09!39;UBERON:0006240!1.79e-09!39;UBERON:0004121!8.80e-09!102;UBERON:0000924!8.80e-09!102;UBERON:0006601!8.80e-09!102;UBERON:0002346!1.49e-08!71;UBERON:0003075!1.49e-08!71;UBERON:0007284!1.49e-08!71;UBERON:0002619!9.27e-08!17;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0007023!1.20e-07!51;UBERON:0003056!3.00e-07!49;UBERON:0003076!3.59e-07!12;UBERON:0003057!3.59e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.21e-17,54;UBERON:0001049,7.14e-16,52;UBERON:0005068,7.14e-16,52;UBERON:0006241,7.14e-16,52;UBERON:0007135,7.14e-16,52;UBERON:0000955,4.02e-13,47;UBERON:0006238,4.02e-13,47;UBERON:0001017,4.77e-13,73;UBERON:0002020,6.71e-13,34;UBERON:0002616,1.13e-12,46;UBERON:0001016,1.69e-12,75;UBERON:0003528,2.53e-10,29;UBERON:0002791,2.53e-10,29;UBERON:0001893,2.53e-10,29;UBERON:0003080,4.63e-10,40;UBERON:0002346,4.65e-10,64;UBERON:0003075,4.65e-10,64;UBERON:0007284,4.65e-10,64;UBERON:0004121,6.51e-10,95;UBERON:0000924,6.51e-10,95;UBERON:0006601,6.51e-10,95;UBERON:0002780,1.79e-09,39;UBERON:0001890,1.79e-09,39;UBERON:0006240,1.79e-09,39;UBERON:0010371,1.11e-08,73;UBERON:0002619,9.27e-08,17;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10;UBERON:0007023,1.20e-07,51;UBERON:0003056,3.00e-07,49;UBERON:0003076,3.59e-07,12;UBERON:0003057,3.59e-07,12
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2,11.5892096262304,15.4447637375176,15.2634456090562,25.1116948308104,21.4434310751865,23.8868487046221,27.2226179663391,19.5718609670607,39.1443767244763,14.6560164057889,5.53211220362722,8.60384150376908,10.5003641705786,9.5578269373521,9.46154302748358,11.7357238645754,14.9735042570543,24.1176492179135,25.6079168075566,15.2655903316669,12.6404448251271,11.9607877021197,12.0171819882848,10.133824192268,9.84646826171148,11.9208812868759,12.7407176491167,14.4735736631086,13.7314371929481,12.65032990473,11.4941851055998,13.8390190650448,11.5454209968395,17.4146584250538,21.5393864434451,13.5411431558179,7.44625009858648,15.7811539382234,22.7963720957985,24.0233568577513,18.681465675261,29.5828363129111,26.5833215138743,81.3242653368576,72.731387368134,75.6222077740004,55.1648715323237,68.5082519770642,78.5609653285289,80.3276775275849,86.0113498158261,82.4719184351252,82.3238895685394,6.2272408550506,13.9658705690361,9.56108192223151,11.6691224192781,14.8825345465867,18.2005073365514,16.2240111295179,18.5431551515005,17.0087181083662,15.4145299175916,16.9831130926461,15.4673599936582,14.5144336578318,15.3660365771686,15.9670603696605,14.7651044297753,14.7173093949966,13.8894638733868,16.071350131329,16.0446822946493,14.4005086001874,14.730491911225,11.6833733074187,17.4415699958794,15.9985946706062,15.9075462836352,18.47572526015,12.8904158604543,16.9755142307327,15.1508413347589,15.4225523561426,15.563708215339,17.187703813127,13.3245683419931,13.5034627686799,20.4844673909116,17.0770074165148,15.9004579995741,22.3807348520547,18.9708620442783,18.7812946852541
|phase1_expression=17.7765220286321,54.4401635917403,32.3049459966571,28.1291716515352,24.0429950374247,16.6200479192771,16.8201101228778,17.3025253411712,5.06839399746,6.78787126333781,9.75942418885378,10.6096971463797,13.6960583944965,17.3966600813805,6.99530499812892,8.50396123037269,9.79386629379405,17.3504190947031,12.8887567589394,10.6097412949508,29.4249783922701,12.4113689001107,6.52999472847338,24.1588558418044,21.7938817013812,38.4735415957064,28.4302917464989,21.1161808032171,29.453630015738,22.9347418081537,20.8426680015986,16.5107975099504,12.916360539276,15.8481681015439,6.93243887403059,6.4831511689812,7.35009682544529,46.4570110117968,32.8160844699996,36.6466620781659,25.8821854733646,40.2996836125483,35.4422557712742,44.6933703813299,43.7948342868303,34.3232426542344,32.8604364626176,21.3664653252838,25.7032833799332,28.7756250629939,22.1178546168073,28.7505128729943,20.4694779390438,17.4086914082723,19.8295341494054,24.6969058594509,13.7536051170603,18.5641953219879,31.5613678940973,47.0801971552109,31.0577387718028,25.0744953731158,21.3430751066673,32.3963898221304,34.6103226898441,41.2078466668738,29.3608108308037,32.6585559523321,10.6800300677732,14.3106294631592,14.7227472945967,60.2723577092026,64.4936139578711,15.6788222995141,15.814502718009,18.3843757322004,90.2950224194987,66.652790480468,72.1950706304344,34.8179799607712,38.6992732438193,30.2129754922921,79.5671547153936,103.548320245829,76.2463256406282,53.6224025562075,54.3859820652573,46.5998614563251,15.5238696333027,13.376166138901,13.3337664802772,12.0459342777394,9.51959867190851,17.2705021324101,18.1937396885347,9.40856462904405,15.870219474888,23.3489541931939,25.9786004602869,18.3736578745377,14.7885590765515,14.115912515575,10.1922095882658,21.3320010945999,13.8554266247177,15.2015919285059,17.1878311305026,16.2141109201065,13.2058320660058,26.7195850316685,8.84775166507293,10.3518262626128,14.5287763271317,13.7157602902887,14.8161770990988,18.7243221081216,36.5848552246873,15.3275318335106,11.4999371753484,20.7061567932684,12.8088080707028,18.9101348722737,5.59175283654366,54.7500090411593,70.1646467825074,26.8229907969021,10.9031763300387,13.197860081855,13.0882333885257,86.2794082971779,76.8601012735293,40.8376644366809,67.270011914411,76.7146371990992,73.5569677740843,69.9259843822035,16.2942982160506,19.2830804445644,29.3158399783063,22.0963948680798,7.80722657776222,11.4951052216736,10.0834792690996,11.7549757911858,13.6753363294169,15.5017601544668,15.4607845523553,30.2682943764648,7.54487975264948,7.37513712654495,10.205165201509,14.4669183402199,16.9608822027615,20.1986256582857,19.3435208223467,9.55364480728767,14.0442637462647,8.4924809347856,12.7873574728017,10.3562886267751,13.6025114789036,9.54328925743379,8.52281048106757,9.44468312387538,10.9529650150039,10.2314935690179,14.7550370769791,10.8591768401468,15.1395061920402,16.5809138719886,13.3763535750662,16.8129985539132,16.9053588774109,14.7627060636409,70.6574227175468,33.3410944108882,32.0506219494284,24.5939026997096,6.61193576659225,10.2184135618593,10.1805294444454,11.6976444281539,14.0098167622268,16.3594038456801,21.8283368310475,21.0814662046734,23.1228392096248,21.2883425084031,21.056121408865,22.4704852163555,30.9077411320813,26.8840718893396,6.2590407314517,10.8536086979242,10.1436962105772,9.77526373657508,8.53390943537553,11.4321386421219,12.8370170362242,10.9231509504906,16.327867695503,16.9054114572867,13.0439155918346,8.17541018008861,11.7935397067922,13.4917267430912,12.5773275260872,11.0941493486112,17.3145579211365,12.6586300478357,11.6737363278025,18.9447375099776,12.9391385874619,18.6070473834252,12.793544597697,15.912469310668,14.5311904952749,21.2275149399882,25.6806934331581,9.09558776498327,8.31121379854332,8.14776411720903,9.15291968325158,13.5680068527871,16.4250112211349,23.6111713907937,17.4975009957872,16.6098517236581,18.337298395611,22.4492741160561,20.8948828057734,24.590339958857,22.6186925908908,12.5098307278303,13.277635371514,13.2449638226272,82.8441044337007,64.3492159391195,11.3115112309906,12.876017287423,5.67914794949262,7.80877488593277,7.75524231838076,8.60287672629187,10.9171350300373,7.64306633129848,8.50102473517278,9.35218745316198,12.6492088942888,39.2012006034605,13.7681882652021,15.313641915384,16.125808976004,16.6619824202261,22.5666735177937,8.25454162926937,16.6277956330613,17.7288774970544,21.5570381802964,25.517117279346,33.0788215255323,20.7214225802178,22.4593348382374,29.7074552459667,27.4088382294997,34.0347292719017,53.1085784975909,8.8229936075342,12.8065096944927,13.2888961719587,10.1083933176096,16.9450376721967,24.0241570079097,52.0635062985965,21.1204537257339,41.0954217475811,37.9308844654535,11.8718102117866,17.115229229766,13.2688434841943,18.7414580084924,22.6514441648185,21.569581910609,76.024373824309,12.6444451790411,13.8279201535359,11.1116716421827,12.2439497053049,12.1657862671712,16.0144721244566,16.487907709404,14.2750481370131,23.7703954943609,35.3228128665592,7.75023184273782,11.5892096262304,15.4447637375176,15.2634456090562,25.1116948308104,21.4434310751865,23.8868487046221,27.2226179663391,19.5718609670607,39.1443767244763,14.6560164057889,5.53211220362722,8.60384150376908,10.5003641705786,9.5578269373521,9.46154302748358,11.7357238645754,14.9735042570543,24.1176492179135,25.6079168075566,15.2655903316669,12.6404448251271,11.9607877021197,12.0171819882848,10.133824192268,9.84646826171148,11.9208812868759,12.7407176491167,14.4735736631086,13.7314371929481,12.65032990473,11.4941851055998,13.8390190650448,11.5454209968395,17.4146584250538,21.5393864434451,13.5411431558179,7.44625009858648,15.7811539382234,22.7963720957985,24.0233568577513,18.681465675261,29.5828363129111,26.5833215138743,81.3242653368576,72.731387368134,75.6222077740004,55.1648715323237,68.5082519770642,78.5609653285289,80.3276775275849,86.0113498158261,82.4719184351252,82.3238895685394,6.2272408550506,13.9658705690361,9.56108192223151,11.6691224192781,14.8825345465867,18.2005073365514,16.2240111295179,18.5431551515005,17.0087181083662,15.4145299175916,16.9831130926461,15.4673599936582,14.5144336578318,15.3660365771686,15.9670603696605,14.7651044297753,14.7173093949966,13.8894638733868,16.071350131329,16.0446822946493,14.4005086001874,14.730491911225,11.6833733074187,17.4415699958794,15.9985946706062,15.9075462836352,18.47572526015,12.8904158604543,16.9755142307327,15.1508413347589,15.4225523561426,15.563708215339,17.187703813127,13.3245683419931,13.5034627686799,20.4844673909116,17.0770074165148,15.9004579995741,22.3807348520547,18.9708620442783,18.7812946852541
|short_description=p1@Spryd3
|short_description=p1@Spryd3
}}
}}

Latest revision as of 13:57, 26 September 2015

Short description:p1@Spryd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Spryd3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000100176, ENSMUST00000139279, NM_001033277, uc007xur.2, uc011zzy.1_5end
EntrezGene:Spryd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Spryd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I554.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I632.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.76
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.89
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.79
GP2+ M cell, pool1.CNhs13228.11845-124H938.47
GP2+ M cell, pool2.CNhs13231.11846-124I128.43
GP2+ M cell, pool3.CNhs13240.11847-124I221.12
Ileum epithelium, pool1.CNhs13199.10252-104B929.45
Ileum epithelium, pool2.CNhs13232.10253-104C122.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C820.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G846.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H240.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H435.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D844.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.79
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.70
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.47
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C124.70
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C331.56
Mouse Granule cells, donor2.CNhs12357.11731-123E347.08
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C732.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E734.61
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C829.36
Mouse Microglia, donor2.CNhs12634.11736-123E832.66
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D564.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D390.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F366.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D772.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E479.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5103.55
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I676.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D653.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E146.60
Mouse Schwann, donor1.CNhs12507.11728-123D915.52
Mouse Schwann, donor2.CNhs12573.11746-123F913.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.21
accessory axillary lymph node, adult.CNhs10475.1063-29H913.21
adrenal gland, adult.CNhs10508.49-24D726.72
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.53
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C114.82
adrenal gland, neonate N25.CNhs11223.1377-27I318.72
amnion, adult pregnant day17.5.CNhs10488.583-22A836.58
aorta, adult.CNhs10498.46-23H115.33
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F520.71
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C318.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B254.75
cerebellum, neonate N30.CNhs11135.1395-42I270.16
colon, adult.CNhs10468.36-18H726.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.09
corpora quadrigemina, adult.CNhs10501.16-22A486.28
corpus striatum, adult.CNhs10487.19-21D876.86
corpus striatum, neonate N00.CNhs11226.630-43F140.84
cortex, adult.CNhs10473.12-14D567.27
cortex, neonate N30.CNhs11107.1392-42F276.71
diencephalon, adult.CNhs10482.20-12F273.56
diencephalon, neonate N30.CNhs11201.1388-42B269.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.28
epididymis, adult.CNhs10490.58-23B229.32
eyeball, adult.CNhs10484.31-12G422.10
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C613.68
eyeball, neonate N01.CNhs11140.1532-43E715.50
eyeball, neonate N02.CNhs11205.1551-44G815.46
eyeball, neonate N16.CNhs11188.777-19A230.27
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E210.21
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C420.20
forelimb, embryo E18.CNhs11008.1520-43B519.34
gonad, embryo E13.CNhs11044.1564-45I69.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.04
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.49
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F513.60
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C610.95
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I215.14
heart, neonate N10.CNhs11118.749-24G116.58
heart, neonate N16.CNhs11209.782-15G113.38
heart, neonate N20.CNhs11127.821-26I616.81
heart, neonate N25.CNhs11196.1351-25D316.91
heart, neonate N30.CNhs11202.1390-42D214.76
hippocampus, adult.CNhs10478.13-16E870.66
hippocampus, neonate N00.CNhs11228.627-43G133.34
intestinal mucosa, adult.CNhs10506.860-29I332.05
intestine, adult.CNhs10496.178-9A324.59
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D510.22
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E921.08
intestine, neonate N06.CNhs11102.688-20B823.12
intestine, neonate N07.CNhs11095.720-20F221.29
intestine, neonate N10.CNhs11098.755-23A521.06
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E330.91
intestine, neonate N30.CNhs11131.1384-42G126.88
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F810.85
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.78
kidney, embryo E18.CNhs11001.1288-20C78.53
kidney, neonate N00.CNhs11214.646-21G711.43
kidney, neonate N10.CNhs11206.758-6D512.84
kidney, neonate N20.CNhs11113.832-19I110.92
kidney, neonate N25.CNhs11122.1353-25F316.33
kidney, neonate N30.CNhs11203.1385-42H116.91
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F88.18
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E113.49
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A317.31
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G218.94
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A315.91
liver, neonate N25.CNhs11198.1368-26H114.53
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B125.68
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A613.57
lung, embryo E18.CNhs10583.1287-20I616.43
lung, neonate N00.CNhs11224.640-42C623.61
lung, neonate N06.CNhs11212.683-20E517.50
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E618.34
lung, neonate N20.CNhs11109.822-18A422.45
lung, neonate N25.CNhs11119.1359-25C720.89
lung, neonate N30.CNhs11133.1394-42H224.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C282.84
medulla oblongata, neonate N30.CNhs11200.1396-42A364.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I713.77
ovary, embryo E18.CNhs11040.505-44H715.31
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F216.63
pancreas, embryo E16.CNhs11003.460-26E517.73
pancreas, embryo E17.CNhs10599.1558-45G321.56
pancreas, embryo E18.CNhs10580.1535-43I725.52
pancreas, neonate N00.CNhs11105.645-26G933.08
pancreas, neonate N01.CNhs11138.1531-43D720.72
pancreas, neonate N02.CNhs11139.1539-43D822.46
pancreas, neonate N16.CNhs11136.787-43B629.71
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G853.11
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F524.02
pituitary gland, neonate N00.CNhs11190.1308-22E952.06
placenta, adult pregnant day10.CNhs10472.539-13I721.12
placenta, adult pregnant day17.CNhs10464.577-18G341.10
prostate, adult.CNhs10470.859-1F837.93
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G417.12
skin, neonate N03.CNhs11215.662-22H313.27
skin, neonate N06.CNhs11097.693-20I518.74
skin, neonate N10.CNhs11108.762-6C422.65
small intestine, neonate N16.CNhs11114.790-21I121.57
spinal cord, adult.CNhs10505.24-13C976.02
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F211.11
spleen, neonate N10.CNhs11116.752-24D112.24
spleen, neonate N20.CNhs11112.824-19H112.17
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.77
stomach, adult.CNhs10503.33-1H635.32
stomach, embryo E12.CNhs10588.356-43E37.75
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D515.26
stomach, embryo E18.CNhs10999.1286-20C625.11
stomach, neonate N03.CNhs11193.1340-24B821.44
stomach, neonate N07.CNhs11210.718-18A923.89
stomach, neonate N25.CNhs11104.1355-25E427.22
stomach, neonate N30.CNhs11134.1386-42I119.57
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G510.50
testis, embryo E17.CNhs11029.486-18I59.56
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B711.74
testis, neonate N07.CNhs11222.726-26I414.97
testis, neonate N10.CNhs11204.763-44D924.12
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I411.96
thymus, embryo E15.CNhs11005.430-45I212.02
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C19.85
thymus, embryo E18.CNhs10595.1273-19G411.92
thymus, neonate N02.CNhs11181.1541-43F812.74
thymus, neonate N03.CNhs11137.2104-43C714.47
thymus, neonate N06.CNhs11197.681-26C413.73
thymus, neonate N07.CNhs11211.713-19D312.65
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A213.84
thymus, neonate N25.CNhs11125.1362-25G711.55
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B421.54
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E422.80
uterus, adult pregnant day19.CNhs10497.590-15F524.02
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D529.58
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A272.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A375.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D755.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A468.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A578.56
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A680.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A786.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A882.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A982.32
whole body, embryo E11.CNhs11014.324-5I86.23
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B114.88
whole body, embryo E16.CNhs10514.453-14F218.20
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C622.38
whole body, neonate N06.CNhs10515.692-21D118.97
whole body, neonate N10.CNhs10518.761-6B418.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.31e-0723
neuroblast (sensu Vertebrata)6.31e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.21e-1754
neural tube7.14e-1652
neural rod7.14e-1652
future spinal cord7.14e-1652
neural keel7.14e-1652
brain4.02e-1347
future brain4.02e-1347
central nervous system4.77e-1373
gray matter6.71e-1334
regional part of brain1.13e-1246
nervous system1.69e-1275
brain grey matter2.53e-1029
regional part of telencephalon2.53e-1029
telencephalon2.53e-1029
anterior neural tube4.63e-1040
neurectoderm4.65e-1064
neural plate4.65e-1064
presumptive neural plate4.65e-1064
ectoderm-derived structure6.51e-1095
ectoderm6.51e-1095
presumptive ectoderm6.51e-1095
regional part of forebrain1.79e-0939
forebrain1.79e-0939
future forebrain1.79e-0939
ecto-epithelium1.11e-0873
regional part of cerebral cortex9.27e-0817
occipital lobe1.10e-0710
visual cortex1.10e-0710
neocortex1.10e-0710
adult organism1.20e-0751
pre-chordal neural plate3.00e-0749
posterior neural tube3.59e-0712
chordal neural plate3.59e-0712
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