FFCP PHASE1:Mm9::chr4:58219640..58219662,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64817 | |EntrezGene=64817 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENSMUST00000128783_5end | |association_with_transcript=68bp_to_ENSMUST00000128783_5end | ||
|cluster_id=chr4:58219640..58219662,- | |||
|description=CAGE_peak_4_at_Svep1_5end | |description=CAGE_peak_4_at_Svep1_5end | ||
|id=chr4:58219640..58219662,- | |id=chr4:58219640..58219662,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.40e-10,6;CL:0000187,5.40e-10,6;CL:0000056,5.40e-10,6;CL:0000222,1.71e-08,7;CL:0000192,2.66e-08,3;CL:0000359,2.66e-08,3;CL:0002539,2.66e-08,3;CL:0000514,2.66e-08,3;CL:0002293,2.81e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.57e-09!14;UBERON:0000117!5.57e-09!14;UBERON:0000171!5.57e-09!14;UBERON:0000170!5.57e-09!14;UBERON:0005597!5.57e-09!14;UBERON:0000118!5.57e-09!14;UBERON:0005153!1.93e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.89e-14,14;UBERON:0000117,7.89e-14,14;UBERON:0000171,7.89e-14,14;UBERON:0000170,7.89e-14,14;UBERON:0005597,7.89e-14,14;UBERON:0000118,7.89e-14,14;UBERON:0005153,5.13e-11,17;UBERON:0005178,5.13e-11,17;UBERON:0005181,5.13e-11,17;UBERON:0002224,5.13e-11,17;UBERON:0000915,5.13e-11,17;UBERON:0008947,5.13e-11,17;UBERON:0003258,5.13e-11,17;UBERON:0000947,3.58e-10,4;UBERON:0001637,3.58e-10,4;UBERON:0004573,3.58e-10,4;UBERON:0003509,3.58e-10,4;UBERON:0004571,3.58e-10,4;UBERON:0010191,3.58e-10,4;UBERON:0004572,3.58e-10,4;UBERON:0005157,4.71e-09,20;UBERON:0001135,2.66e-08,3;UBERON:0004237,2.66e-08,3;UBERON:0004695,2.66e-08,3;UBERON:0002111,2.66e-08,3;UBERON:0004178,2.66e-08,3;UBERON:0000055,4.13e-08,5;UBERON:0007500,4.13e-08,5;UBERON:0001981,4.13e-08,5;UBERON:0002049,4.13e-08,5;UBERON:0007798,4.13e-08,5;UBERON:0004537,4.13e-08,5;UBERON:0006965,4.13e-08,5;UBERON:0000383,7.50e-08,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3450627054112,15.6120474078052,9.9115246167308,6.25913075478431,0,0,0.388859798148567,0.55994568650145,0,0,0,0,1.54355661621568,2.57880095944881,0,0,0,0,1.35537812827653,0,0,0,0,1.79760066311043,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,8.98285341900225,15.2883143823987,14.2213340630666,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.494389935468748,1.87979163995885,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0.746441823660558,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.476255494059295,0.384341160854549,0.749613796477831,0.776110112217047,0.215567992932842,0.567318240503458,1.05570674498369,1.97276159184817,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.80673409849337,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.632365371242573,0.738050739898011,0.627994911365499,0.493588655687202,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,2.21703828199926,0.37898282354097,1.62964976442026,0.848725428875941,1.17345124144251,2.01007508930179,0.952174563544055,2.14647012643579,1.10344600874334,0.8858587585951,1.2756381492599,2.62181303545181,2.76295970985433,5.06271705035291,0,0,0.491764273019036,0.827810238914197,0,0,2.29508923527346,1.26235463602186,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0.824850614862677,1.32745138339963,0.485561272309963,0.906970670894253,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.258717367565509,0,0.709360934569094,0.891844088010353,1.48094118541909,0.913394847343798,0,0,0,1.48397627647332,0.484393280087717,0.784068024066026,0.954978752025092,0.820704498725306,0.291480836629851,0,0.854354403989263,1.44470807574256,1.11116716421827,0.188368457004691,0.410082683163076,1.14389086603261,0,0,0,0,0.474503990371703,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.944050424693745,1.07449492442937,1.30877970992015,0.777689839750757,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.386379188064381,2.25218970541418,0.36630324853453,2.57242054894879,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,1.59609949360412,0.341467211508268,0.486213434136588,0,0.183843508450014,1.55572709461131,0,0.320919209591815,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.384150914429216,0.459483751644906,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.147198920134397,0,0.532427418478012,0.476872379894642,0.145346416632329,0.470546902076653,0.846146078916765,1.28049581010941,0.526139422875686,1.08643291076689,1.12228454331548,0.474540072496697,0.689531376628944,0,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3450627054112,15.6120474078052,9.9115246167308,6.25913075478431,0,0,0.388859798148567,0.55994568650145,0,0,0,0,1.54355661621568,2.57880095944881,0,0,0,0,1.35537812827653,0,0,0,0,1.79760066311043,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,8.98285341900225,15.2883143823987,14.2213340630666,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.494389935468748,1.87979163995885,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0.746441823660558,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.476255494059295,0.384341160854549,0.749613796477831,0.776110112217047,0.215567992932842,0.567318240503458,1.05570674498369,1.97276159184817,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.268412837520744,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.80673409849337,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.632365371242573,0.738050739898011,0.627994911365499,0.493588655687202,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,2.21703828199926,0.37898282354097,1.62964976442026,0.848725428875941,1.17345124144251,2.01007508930179,0.952174563544055,2.14647012643579,1.10344600874334,0.8858587585951,1.2756381492599,2.62181303545181,2.76295970985433,5.06271705035291,0,0,0.491764273019036,0.827810238914197,0,0,2.29508923527346,1.26235463602186,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0.824850614862677,1.32745138339963,0.485561272309963,0.906970670894253,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.258717367565509,0,0.709360934569094,0.891844088010353,1.48094118541909,0.913394847343798,0,0,0,1.48397627647332,0.484393280087717,0.784068024066026,0.954978752025092,0.820704498725306,0.291480836629851,0,0.854354403989263,1.44470807574256,1.11116716421827,0.188368457004691,0.410082683163076,1.14389086603261,0,0,0,0,0.474503990371703,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.944050424693745,1.07449492442937,1.30877970992015,0.777689839750757,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.386379188064381,2.25218970541418,0.36630324853453,2.57242054894879,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,1.59609949360412,0.341467211508268,0.486213434136588,0,0.183843508450014,1.55572709461131,0,0.320919209591815,0.758091635291392,0.760437899670719,0.188626341386076,0.468207537349412,0.384150914429216,0.459483751644906,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.147198920134397,0,0.532427418478012,0.476872379894642,0.145346416632329,0.470546902076653,0.846146078916765,1.28049581010941,0.526139422875686,1.08643291076689,1.12228454331548,0.474540072496697,0.689531376628944,0,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Svep1 | |short_description=p4@Svep1 | ||
}} | }} |
Latest revision as of 03:11, 27 September 2015
Short description: | p4@Svep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Svep1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENSMUST00000128783_5end |
EntrezGene: | Svep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.40e-10 | 6 |
muscle cell | 5.40e-10 | 6 |
myoblast | 5.40e-10 | 6 |
mesodermal cell | 1.71e-08 | 7 |
smooth muscle cell | 2.66e-08 | 3 |
vascular associated smooth muscle cell | 2.66e-08 | 3 |
aortic smooth muscle cell | 2.66e-08 | 3 |
smooth muscle myoblast | 2.66e-08 | 3 |
epithelial cell of thymus | 2.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 7.89e-14 | 14 |
respiratory tube | 7.89e-14 | 14 |
respiration organ | 7.89e-14 | 14 |
pair of lungs | 7.89e-14 | 14 |
lung primordium | 7.89e-14 | 14 |
lung bud | 7.89e-14 | 14 |
epithelial bud | 5.13e-11 | 17 |
thoracic cavity element | 5.13e-11 | 17 |
thoracic segment organ | 5.13e-11 | 17 |
thoracic cavity | 5.13e-11 | 17 |
thoracic segment of trunk | 5.13e-11 | 17 |
respiratory primordium | 5.13e-11 | 17 |
endoderm of foregut | 5.13e-11 | 17 |
aorta | 3.58e-10 | 4 |
artery | 3.58e-10 | 4 |
systemic artery | 3.58e-10 | 4 |
arterial blood vessel | 3.58e-10 | 4 |
systemic arterial system | 3.58e-10 | 4 |
aortic system | 3.58e-10 | 4 |
arterial system | 3.58e-10 | 4 |
epithelial fold | 4.71e-09 | 20 |
smooth muscle tissue | 2.66e-08 | 3 |
blood vessel smooth muscle | 2.66e-08 | 3 |
arterial system smooth muscle | 2.66e-08 | 3 |
artery smooth muscle tissue | 2.66e-08 | 3 |
aorta smooth muscle tissue | 2.66e-08 | 3 |
vessel | 4.13e-08 | 5 |
epithelial tube open at both ends | 4.13e-08 | 5 |
blood vessel | 4.13e-08 | 5 |
vasculature | 4.13e-08 | 5 |
vascular system | 4.13e-08 | 5 |
blood vasculature | 4.13e-08 | 5 |
vascular cord | 4.13e-08 | 5 |
musculature of body | 7.50e-08 | 10 |