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FFCP PHASE1:Mm9::chr4:43591696..43591781,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230101
|EntrezGene=230101
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q69ZF3
|UniProt=Q69ZF3
|association_with_transcript=0bp_to_ENSMUST00000030189,NM_172692,uc008sqi.2_5end
|association_with_transcript=0bp_to_ENSMUST00000030189,NM_172692,uc008sqi.2_5end
|cluster_id=chr4:43591696..43591781,-
|description=CAGE_peak_1_at_Gba2_5end
|description=CAGE_peak_1_at_Gba2_5end
|id=chr4:43591696..43591781,-
|id=chr4:43591696..43591781,-
|ontology_enrichment_celltype=CL:0000117!1.07e-15!23;CL:0000337!1.07e-15!23;CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0000221!3.79e-11!44;CL:0000133!3.79e-11!44;CL:0002319!6.07e-11!43;CL:0000393!1.98e-09!39;CL:0000211!1.98e-09!39;CL:0000055!4.36e-07!50
|ontology_enrichment_celltype=CL:0000117!1.07e-15!23;CL:0000337!1.07e-15!23;CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0000221!3.79e-11!44;CL:0000133!3.79e-11!44;CL:0002319!6.07e-11!43;CL:0000393!1.98e-09!39;CL:0000211!1.98e-09!39;CL:0000055!4.36e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-15,23;CL:0000337,1.06e-15,23;CL:0000540,2.19e-14,33;CL:0000047,2.19e-14,33;CL:0000031,2.19e-14,33;CL:0000404,2.19e-14,33;CL:0000221,3.79e-11,44;CL:0000133,3.79e-11,44;CL:0002319,6.06e-11,43;CL:0000393,1.97e-09,39;CL:0000211,1.97e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.49e-26!73;UBERON:0005743!2.49e-26!73;UBERON:0000153!5.14e-25!94;UBERON:0000073!7.38e-25!75;UBERON:0001016!7.38e-25!75;UBERON:0007811!5.37e-24!86;UBERON:0001049!2.56e-23!52;UBERON:0005068!2.56e-23!52;UBERON:0006241!2.56e-23!52;UBERON:0007135!2.56e-23!52;UBERON:0000033!1.02e-22!63;UBERON:0002346!3.22e-22!71;UBERON:0003075!3.22e-22!71;UBERON:0007284!3.22e-22!71;UBERON:0000955!8.58e-22!50;UBERON:0006238!8.58e-22!50;UBERON:0002616!3.12e-21!49;UBERON:0003056!6.19e-19!49;UBERON:0004121!1.40e-18!102;UBERON:0000924!1.40e-18!102;UBERON:0006601!1.40e-18!102;UBERON:0003080!3.58e-17!40;UBERON:0002020!3.81e-17!34;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0002791!8.36e-14!29;UBERON:0003528!8.36e-14!29;UBERON:0001893!8.36e-14!29;UBERON:0000956!4.80e-09!21;UBERON:0001869!4.80e-09!21;UBERON:0000203!4.80e-09!21;UBERON:0000025!7.58e-08!114;UBERON:0000477!9.41e-08!154;UBERON:0002619!5.06e-07!17;UBERON:0003076!8.58e-07!12;UBERON:0003057!8.58e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-26,73;UBERON:0002346,2.98e-25,64;UBERON:0003075,2.98e-25,64;UBERON:0007284,2.98e-25,64;UBERON:0001016,7.36e-25,75;UBERON:0000073,8.34e-25,54;UBERON:0001049,2.55e-23,52;UBERON:0005068,2.55e-23,52;UBERON:0006241,2.55e-23,52;UBERON:0007135,2.55e-23,52;UBERON:0010314,2.72e-23,92;UBERON:0004121,2.21e-20,95;UBERON:0000924,2.21e-20,95;UBERON:0006601,2.21e-20,95;UBERON:0010371,5.44e-20,73;UBERON:0000955,7.75e-20,47;UBERON:0006238,7.75e-20,47;UBERON:0002616,2.74e-19,46;UBERON:0003056,6.18e-19,49;UBERON:0003080,3.57e-17,40;UBERON:0002020,3.80e-17,34;UBERON:0002780,1.29e-16,39;UBERON:0001890,1.29e-16,39;UBERON:0006240,1.29e-16,39;UBERON:0003528,8.35e-14,29;UBERON:0002791,8.35e-14,29;UBERON:0001893,8.35e-14,29;UBERON:0000956,4.79e-09,21;UBERON:0001869,4.79e-09,21;UBERON:0000203,4.79e-09,21;UBERON:0000025,7.04e-08,114;UBERON:0002619,5.06e-07,17;UBERON:0003076,8.57e-07,12;UBERON:0003057,8.57e-07,12
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7970992015,2.46268449254406,2.4853572523477,96.3914925149965,8.67195967055077,8.93475848468327,8.75030347548214,6.58715099736429,8.10989402355735,6.68936260280798,8.59348939970071,5.87212328783981,27.7821738949907,50.1172210888686,19.9087005995752,9.52808511863772,8.42229848751584,8.70469513951227,10.9206284357164,15.6958270277199,16.4667765842357,17.4273642066001,14.4382023425851,17.83239275727,20.7701941381891,21.5381916434853,20.8779696359515,22.6741190232244,5.66825959038028,2.21985953374065,2.9605572681127,0.335769232728157,3.67060228661162,2.43987218086537,2.93042598827624,3.85863082342319,1.50471631210609,29.9318476587045,17.0320337507655,22.3429250241365,28.6994814513958,22.6077231524312,15.8632718451837,21.6007200074178,18.9134905354173,21.2976932222576,17.6038505995619,11.0014588439227,11.1726964552289,14.8538237006097,12.398442570483,10.8998844566551,11.0306105070008,10.2233494788743,7.82933217507798,6.4183841918363,10.3605856823157,8.36481689637791,8.48818536237343,10.8624148665064,11.268426823257,9.99377159827671,9.52587382566147,9.15486174964358,8.48800570040302,7.82963211526283,11.9231125308862,4.4573002810104,8.34136288948886,8.10683045820891,8.43009216467505,8.37573485696442,9.39222147597609,8.23175877927476,6.83981249738391,10.3211126522855,7.2948495315506,9.72807148618228,10.0474572023075,10.6400071224119,10.2258315182738,8.10207766120794,21.4837097026634,6.78401664491684,8.80971321598023,9.94699326757986,4.19123696327079,5.79669589051054
|phase1_expression=13.4525031568027,0.697950815278722,2.27499619694768,0.90739263392049,2.50447864973174,3.52546471014969,1.86890112476421,22.9839515726006,3.51971805379167,3.5109678948299,2.56826952338257,3.98860794976682,18.1472773727078,20.6312149708834,4.66353666541928,4.04950534779652,1.39912375625629,14.9844528545163,15.6310454310542,14.429248161133,20.3253463461057,5.46100231604869,4.4403964153619,2.55987876469451,2.2940928106717,0,0.430761996159075,0.861884930743556,1.33016393619462,2.01624103807945,1.33038306393183,6.35030673459631,6.76571266343027,0,2.88851619751275,2.82598897109437,3.26670970019791,5.02237956884289,3.906676722619,5.23523743973798,4.70585190424811,7.5135003345429,6.311634589405,2.64383317748712,1.52065396829272,1.46837401729345,11.7358701652206,11.9913836009246,5.71184075109627,4.6663175777828,4.4795654920116,5.75010257459886,12.5836954543302,14.5072428402269,13.4437519656986,2.31533492432352,3.72493471920384,5.67239301505187,46.7351024585671,38.6163414868584,43.1005354384202,3.38844532069132,4.4464739805557,4.04954872776629,5.93319817540185,0,6.89080254192331,8.83702102239575,30.8995044679263,31.1863717546205,27.3422449756797,56.8445458963569,43.7319711084195,32.5825525911778,33.7376057984192,45.041720543891,42.9451935897616,31.9218345212969,32.2573719838111,53.8096053939191,52.5139074277831,41.6730696445408,41.5982668512058,38.2678574821542,28.2676758387099,42.7211448936818,41.2877874317399,42.8718725398191,3.93776205332557,4.00529268565963,8.98579914975201,4.30211938490693,0,0,1.29955283489534,1.79210754838934,6.46044332606059,1.1930122580464,1.29893002301434,1.41335829804136,12.1125341007945,2.56652954828636,7.64415719119937,7.11066703153331,2.16491041011214,2.28023878927589,3.0331466700887,4.90990682791958,9.32176381129818,5.04703272820404,6.93941307064543,5.48037860961854,4.84292544237723,6.63179618431539,6.58496759959947,5.52933001850572,1.73036477414062,1.87979163995885,9.73071607144862,6.14714029800155,8.17113618303456,3.87900202508178,3.72783522436244,14.6390398505774,19.4785437336513,2.55457055208591,2.51611761462433,3.59941638596045,2.92261522268049,27.5614776504874,21.9600289352941,36.9423795211821,22.0756886644191,25.3158302757027,24.5189892580281,26.120843353909,10.9986512958342,3.85661608891288,3.28539585963777,5.05060454127538,12.4915625244196,13.7941262660084,13.3245976055958,14.4676625122286,19.1862927606745,15.2455327138971,17.7096259417887,11.3829483125167,17.0298714416945,14.3720620927543,10.7330185740009,11.3981780862339,8.89751197521913,8.00979983000983,7.40815691068596,8.55847347319521,2.1066395619397,3.86021860672073,5.96743348730745,14.7059298500206,11.4917769390737,13.5046546095761,12.7842157216014,13.3799677588235,13.2669717083145,12.7893669612724,11.267482858784,13.077718345123,11.8483091937706,9.35754545250843,9.07970666913584,7.60239934611728,7.90380415047782,9.39444931322602,19.767255165028,28.6074822414411,0.660837565967596,2.11560453330835,9.81125952462076,9.75394021813842,7.47431275668141,6.05050573870028,4.22518283305254,4.56541502670142,2.37264530772256,1.64698954724011,4.02136334080431,3.38226002469956,4.09424582950152,4.49409704327111,1.29682829924817,2.58883655230677,9.10405924574792,7.42615331963237,18.0332377076929,6.31319116320474,7.95205197387266,9.11765658574141,8.28398636327771,3.54264355151045,4.86696056308262,3.33172342588861,1.48226313543574,4.50481785433454,4.71741588271687,4.04751802292737,4.66578279193557,4.82354319504834,2.29163266603278,4.31544206176216,3.40483976227574,2.47105271869273,0,4.83783231969054,4.68056509671841,2.02063102357689,2.51156378930677,1.92977408545347,5.17308932466493,12.3169417650815,7.82231886921724,8.99648954608497,8.44884893838608,8.37531287209079,7.14130922658041,10.5372169843211,7.72412206120336,7.75126413770712,9.72674088810671,6.06294264448231,6.56202931090403,7.37710198765709,0,3.26343410291226,2.45882136509518,2.48343071674259,23.7614873181932,22.1530087659264,0.819674726883377,5.30188947129183,8.51872192423893,9.37052986311932,10.9865932843727,7.88597033243422,8.46634961513098,10.4738316391868,10.5250782435473,7.3063964477828,9.88219444866309,24.0990987316355,4.68402281187286,9.43747699436453,8.1443479676788,5.93892442701128,0,4.61283208694465,3.62788268357701,3.58349651536206,4.42952839321159,5.53383266299069,5.16856586336442,5.08947221268508,3.20847640546249,4.10847785316561,2.10837217149998,1.03135543248187,12.5962654128902,11.3438489239725,19.1450851998477,10.7168517515796,12.945837055886,11.9507107793387,14.6448628335888,15.22324745573,3.05073220482823,1.69465656691056,0.661585194164886,3.2977250588296,4.52100394748536,4.04096597018644,1.90995750405018,3.44695889464629,4.37221254944776,22.2510362412612,5.80960994712699,8.04908785056568,5.37064129372164,4.33247451110789,6.28793447516716,7.0921233694022,4.9293744698218,4.05859211738608,6.77179871641677,0.954670618015114,12.811607740036,6.91286188231286,5.29226170026826,5.43629569637619,6.76923947613151,5.79916689454729,5.95104881222419,1.30877970992015,2.46268449254406,2.4853572523477,96.3914925149965,8.67195967055077,8.93475848468327,8.75030347548214,6.58715099736429,8.10989402355735,6.68936260280798,8.59348939970071,5.87212328783981,27.7821738949907,50.1172210888686,19.9087005995752,9.52808511863772,8.42229848751584,8.70469513951227,10.9206284357164,15.6958270277199,16.4667765842357,17.4273642066001,14.4382023425851,17.83239275727,20.7701941381891,21.5381916434853,20.8779696359515,22.6741190232244,5.66825959038028,2.21985953374065,2.9605572681127,0.335769232728157,3.67060228661162,2.43987218086537,2.93042598827624,3.85863082342319,1.50471631210609,29.9318476587045,17.0320337507655,22.3429250241365,28.6994814513958,22.6077231524312,15.8632718451837,21.6007200074178,18.9134905354173,21.2976932222576,17.6038505995619,11.0014588439227,11.1726964552289,14.8538237006097,12.398442570483,10.8998844566551,11.0306105070008,10.2233494788743,7.82933217507798,6.4183841918363,10.3605856823157,8.36481689637791,8.48818536237343,10.8624148665064,11.268426823257,9.99377159827671,9.52587382566147,9.15486174964358,8.48800570040302,7.82963211526283,11.9231125308862,4.4573002810104,8.34136288948886,8.10683045820891,8.43009216467505,8.37573485696442,9.39222147597609,8.23175877927476,6.83981249738391,10.3211126522855,7.2948495315506,9.72807148618228,10.0474572023075,10.6400071224119,10.2258315182738,8.10207766120794,21.4837097026634,6.78401664491684,8.80971321598023,9.94699326757986,4.19123696327079,5.79669589051054
|short_description=p1@Gba2
|short_description=p1@Gba2
}}
}}

Latest revision as of 00:23, 27 September 2015

Short description:p1@Gba2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gba2_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000030189, NM_172692, uc008sqi.2_5end
EntrezGene:Gba2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gba2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C346.74
Mouse Granule cells, donor2.CNhs12357.11731-123E338.62
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F531.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F233.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.04
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D453.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F452.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.60
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.87
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A427.56
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F136.94
cortex, adult.CNhs10473.12-14D522.08
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B226.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C612.49
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D414.47
eyeball, neonate N00.CNhs11207.633-15C619.19
eyeball, neonate N01.CNhs11140.1532-43E715.25
eyeball, neonate N02.CNhs11205.1551-44G817.71
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E217.03
forelimb, embryo E12.CNhs10600.359-14H214.37
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E914.71
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I913.50
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E313.08
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G19.36
heart, neonate N16.CNhs11209.782-15G19.08
heart, neonate N20.CNhs11127.821-26I67.60
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D29.39
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G128.61
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F87.43
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G79.12
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C59.00
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A68.38
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C610.54
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C223.76
medulla oblongata, neonate N30.CNhs11200.1396-42A322.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C719.15
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F514.64
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C922.25
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.77
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E312.81
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G596.39
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I48.59
testis, neonate N10.CNhs11204.763-44D95.87
testis, neonate N20.CNhs11110.839-18H327.78
testis, neonate N30.CNhs11130.1391-42E250.12
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I28.42
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C110.92
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F816.47
thymus, neonate N03.CNhs11137.2104-43C717.43
thymus, neonate N06.CNhs11197.681-26C414.44
thymus, neonate N07.CNhs11211.713-19D317.83
thymus, neonate N10.CNhs11194.748-24E420.77
thymus, neonate N20.CNhs11186.820-7A221.54
thymus, neonate N25.CNhs11125.1362-25G720.88
thymus, neonate N30.CNhs11132.1393-42G222.67
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I811.00
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H214.85
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I521.48
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C69.95
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.06e-1523
neuroblast (sensu Vertebrata)1.06e-1523
neuron2.19e-1433
neuronal stem cell2.19e-1433
neuroblast2.19e-1433
electrically signaling cell2.19e-1433
ectodermal cell3.79e-1144
neurectodermal cell3.79e-1144
neural cell6.06e-1143
electrically responsive cell1.97e-0939
electrically active cell1.97e-0939

Uber anatomy
Ontology termp-valuen
central nervous system2.48e-2673
neurectoderm2.98e-2564
neural plate2.98e-2564
presumptive neural plate2.98e-2564
nervous system7.36e-2575
regional part of nervous system8.34e-2554
neural tube2.55e-2352
neural rod2.55e-2352
future spinal cord2.55e-2352
neural keel2.55e-2352
structure with developmental contribution from neural crest2.72e-2392
ectoderm-derived structure2.21e-2095
ectoderm2.21e-2095
presumptive ectoderm2.21e-2095
ecto-epithelium5.44e-2073
brain7.75e-2047
future brain7.75e-2047
regional part of brain2.74e-1946
pre-chordal neural plate6.18e-1949
anterior neural tube3.57e-1740
gray matter3.80e-1734
regional part of forebrain1.29e-1639
forebrain1.29e-1639
future forebrain1.29e-1639
brain grey matter8.35e-1429
regional part of telencephalon8.35e-1429
telencephalon8.35e-1429
cerebral cortex4.79e-0921
cerebral hemisphere4.79e-0921
pallium4.79e-0921
tube7.04e-08114
regional part of cerebral cortex5.06e-0717
posterior neural tube8.57e-0712
chordal neural plate8.57e-0712
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