FFCP PHASE1:Mm9::chr14:65059503..65059557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:65059503..65059557,+ | |||
|description=CAGE_peak_at_chr14:65059503..65059557,+ | |description=CAGE_peak_at_chr14:65059503..65059557,+ | ||
|id=chr14:65059503..65059557,+ | |id=chr14:65059503..65059557,+ | ||
|ontology_enrichment_celltype=CL:0000723!2.51e-13!91;CL:0000048!2.51e-13!91;CL:0000034!1.11e-12!97;CL:0000144!2.88e-09!121;CL:0000012!2.88e-09!121;CL:0000540!6.22e-09!33;CL:0000047!6.22e-09!33;CL:0000031!6.22e-09!33;CL:0000404!6.22e-09!33;CL:0002371!1.65e-08!118;CL:0000117!6.78e-08!23;CL:0000337!6.78e-08!23;CL:0002319!2.20e-07!43;CL:0000548!2.74e-07!115;CL:0000004!2.74e-07!115;CL:0000255!2.74e-07!115;CL:0000221!3.78e-07!44;CL:0000133!3.78e-07!44;CL:0000988!7.50e-07!32;CL:0002032!7.50e-07!32;CL:0000037!7.50e-07!32;CL:0000566!7.50e-07!32;CL:0000837!7.50e-07!32;CL:0000393!9.81e-07!39;CL:0000211!9.81e-07!39 | |ontology_enrichment_celltype=CL:0000723!2.51e-13!91;CL:0000048!2.51e-13!91;CL:0000034!1.11e-12!97;CL:0000144!2.88e-09!121;CL:0000012!2.88e-09!121;CL:0000540!6.22e-09!33;CL:0000047!6.22e-09!33;CL:0000031!6.22e-09!33;CL:0000404!6.22e-09!33;CL:0002371!1.65e-08!118;CL:0000117!6.78e-08!23;CL:0000337!6.78e-08!23;CL:0002319!2.20e-07!43;CL:0000548!2.74e-07!115;CL:0000004!2.74e-07!115;CL:0000255!2.74e-07!115;CL:0000221!3.78e-07!44;CL:0000133!3.78e-07!44;CL:0000988!7.50e-07!32;CL:0002032!7.50e-07!32;CL:0000037!7.50e-07!32;CL:0000566!7.50e-07!32;CL:0000837!7.50e-07!32;CL:0000393!9.81e-07!39;CL:0000211!9.81e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.38e-16,91;CL:0000048,1.38e-16,91;CL:0000034,3.76e-16,97;CL:0000540,1.29e-09,33;CL:0000047,1.29e-09,33;CL:0000031,1.29e-09,33;CL:0000404,1.29e-09,33;CL:0000117,9.96e-09,23;CL:0000337,9.96e-09,23;CL:0000988,3.97e-08,32;CL:0002032,3.97e-08,32;CL:0000037,3.97e-08,32;CL:0000837,3.97e-08,32;CL:0000393,8.35e-08,39;CL:0000211,8.35e-08,39;CL:0002319,1.28e-07,43;CL:0000221,3.68e-07,44;CL:0000133,3.68e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-16!73;UBERON:0005743!2.59e-16!73;UBERON:0002346!4.55e-15!71;UBERON:0003075!4.55e-15!71;UBERON:0007284!4.55e-15!71;UBERON:0000073!9.69e-15!75;UBERON:0001016!9.69e-15!75;UBERON:0003056!3.55e-14!49;UBERON:0000033!7.34e-14!63;UBERON:0000955!3.08e-13!50;UBERON:0006238!3.08e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0001049!7.75e-13!52;UBERON:0005068!7.75e-13!52;UBERON:0006241!7.75e-13!52;UBERON:0007135!7.75e-13!52;UBERON:0002780!3.40e-12!39;UBERON:0001890!3.40e-12!39;UBERON:0006240!3.40e-12!39;UBERON:0004121!7.83e-12!102;UBERON:0000924!7.83e-12!102;UBERON:0006601!7.83e-12!102;UBERON:0003080!1.08e-11!40;UBERON:0002020!5.48e-10!34;UBERON:0007811!1.17e-09!86;UBERON:0000153!1.47e-09!94;UBERON:0002791!2.20e-09!29;UBERON:0003528!2.20e-09!29;UBERON:0001893!2.20e-09!29;UBERON:0000956!7.82e-07!21;UBERON:0001869!7.82e-07!21;UBERON:0000203!7.82e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!2.59e-16!73;UBERON:0005743!2.59e-16!73;UBERON:0002346!4.55e-15!71;UBERON:0003075!4.55e-15!71;UBERON:0007284!4.55e-15!71;UBERON:0000073!9.69e-15!75;UBERON:0001016!9.69e-15!75;UBERON:0003056!3.55e-14!49;UBERON:0000033!7.34e-14!63;UBERON:0000955!3.08e-13!50;UBERON:0006238!3.08e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0001049!7.75e-13!52;UBERON:0005068!7.75e-13!52;UBERON:0006241!7.75e-13!52;UBERON:0007135!7.75e-13!52;UBERON:0002780!3.40e-12!39;UBERON:0001890!3.40e-12!39;UBERON:0006240!3.40e-12!39;UBERON:0004121!7.83e-12!102;UBERON:0000924!7.83e-12!102;UBERON:0006601!7.83e-12!102;UBERON:0003080!1.08e-11!40;UBERON:0002020!5.48e-10!34;UBERON:0007811!1.17e-09!86;UBERON:0000153!1.47e-09!94;UBERON:0002791!2.20e-09!29;UBERON:0003528!2.20e-09!29;UBERON:0001893!2.20e-09!29;UBERON:0000956!7.82e-07!21;UBERON:0001869!7.82e-07!21;UBERON:0000203!7.82e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.34e-16,64;UBERON:0003075,5.34e-16,64;UBERON:0007284,5.34e-16,64;UBERON:0001017,8.51e-16,73;UBERON:0001016,1.10e-14,75;UBERON:0003056,2.35e-14,49;UBERON:0000073,1.11e-13,54;UBERON:0002780,1.42e-12,39;UBERON:0001890,1.42e-12,39;UBERON:0006240,1.42e-12,39;UBERON:0004121,1.57e-12,95;UBERON:0000924,1.57e-12,95;UBERON:0006601,1.57e-12,95;UBERON:0000955,2.05e-12,47;UBERON:0006238,2.05e-12,47;UBERON:0001049,2.33e-12,52;UBERON:0005068,2.33e-12,52;UBERON:0006241,2.33e-12,52;UBERON:0007135,2.33e-12,52;UBERON:0002616,3.90e-12,46;UBERON:0003080,7.36e-12,40;UBERON:0010371,1.42e-11,73;UBERON:0002020,3.92e-10,34;UBERON:0003528,2.04e-09,29;UBERON:0002791,2.04e-09,29;UBERON:0001893,2.04e-09,29;UBERON:0010314,2.60e-07,92 | |||
|phase1_expression=0.640595388419176,1.39590163055744,1.81999695755814,0.90739263392049,2.00358291978539,0.671517087647559,0.233612640595526,2.58246646883153,2.25261955442667,3.04283884218592,1.88339765048055,2.31339261086476,2.22560948910567,1.31130603628496,1.33243904726265,0.404950534779652,0,2.36596624018678,3.01651753932625,2.12194825899015,0.850432901510698,0.695036658406197,2.35079810225042,0.47997726838022,0.91763712426868,1.14846392823004,0,0.430942465371778,1.33016393619462,0,1.10865255327652,5.71527606113668,4.92051830067656,15.8481681015439,2.3108129580102,1.66234645358492,2.24586291888606,14.6486070757918,11.720030167857,5.23523743973798,48.2349820185432,12.294818729252,16.0218416500281,2.01434908760924,1.82478476195126,0.917733760808408,7.04152209913235,2.18025156380447,0.878744730937887,0.972149495371417,0.979904951377538,2.87505128729943,5.20126078778983,2.90144856804538,3.6970317905671,0,0,0,2.22548106945558,5.28990979272033,4.43681982454325,1.69422266034566,0,1.3498495759221,1.97773272513395,0,1.19840044207362,0.384218305321555,2.07379224616955,3.24014251996058,3.36519938162211,1.99955689082663,1.32521124570968,2.69479758272899,2.30029130443767,2.75765635983006,2.20231761998777,1.53224805702225,1.68967186581868,3.42904348098504,2.01272815925301,2.08365348222704,2.23346399201105,1.12552522006336,2.13917546887534,1.17851434189467,1.28134512719193,3.35519002485541,0.227178579999552,0.0755715601067855,2.6087803983151,0.860423876981386,1.3599426674155,0,0,0.896053774194671,0.561777680527007,1.02258193546835,1.03914401841148,1.7666978725517,0.845060518660083,0,0,0,0.649473123033642,1.77351905832569,1.01104889002957,0.79928715803342,0.776813650941515,0.890652834388949,1.04091196059682,0.304465478312141,1.15307748628029,1.3565037649736,1.05829836422134,1.25666591329675,0,0.433798070759735,1.76922110389975,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,2.63502717310392,1.46612694769419,0.255457055208591,1.55759661857696,2.39961092397363,1.52484272487678,0.748953197024114,2.74500361691176,3.64397621127307,1.39059456153821,2.04572365864264,1.66230435647648,1.78465389374533,1.2220723662038,0.870848794270651,1.26361379216837,0.841767423545896,1.95180664444056,2.06911893990126,3.24111833649629,1.9591626318643,1.63287597963187,2.17793324484245,2.81105173679186,4.13925393182425,0.431135985865684,1.70195472151037,2.46331573829528,2.41115305670332,1.11218899690239,0.696504333044333,1.02891068203972,0.398068533636986,6.31991868581911,1.54408744268829,1.42081749697796,0.828503090142008,0.469052119962192,1.2604344302271,0,0.983821158737019,1.07986979021165,0,0.536546802799238,0.817357396570186,0.493679549740441,0.164167464079095,0.729619285912702,0.584799949701329,0.878200461164203,1.34206418760372,1.89260953707715,2.6755199218614,0,1.58670339998127,2.13288250535234,1.62565670302307,0.257734922644187,0,1.11189021922435,0.760902504450237,0.949058123089023,1.15289268306808,1.00534083520108,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0.948339504765408,0.456994050438915,0,1.83286195060783,1.16371492300575,1.26244475802573,0.948548056863859,0.590440591918409,0.31399745568275,0.616985819609003,0,0.500535317148282,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,1.01850340712568,0.575392274901621,0.162135226775035,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.717589654087649,0,1.10851914099963,1.51593129416388,0.488894929326078,1.18821560042632,0.938760993154008,0.502518772325447,0.952174563544055,0.780534591431195,1.10344600874334,1.10732344824387,0.637819074629948,1.47476983244164,1.03610989119537,2.60368305446721,1.50791283939272,1.63171705145613,0,0.551873492609465,0.963303539926752,0.703270119553219,0,1.76729649043061,3.15508219416257,2.34263246577983,1.29254038639679,1.43381278771531,2.89638276307112,2.26461224631066,0.809621403349789,2.92255857911312,1.18586333383957,1.92792789853084,1.41940085208269,1.78065603667255,1.46598263418218,0.659880491890142,0,1.21390318077491,1.209294227859,0.377210159511796,0.590603785761546,0.307435147943927,1.03371317267288,1.81766864738753,0.712994756769443,0.316036757935816,1.05418608574999,0,2.38307724027652,1.98067203434441,2.97524972700335,3.42939256050548,1.06404140185364,1.60531935841864,2.30368628842969,3.04464949114599,0,0.63549621259146,1.54369878638473,0.49465875882444,0.645857706783622,1.08563264870681,0.716234064018819,0.492422699235184,0.582961673259701,0.927126510052548,1.70870880797853,1.03193433981611,0.740778109478847,0.188368457004691,0.683471138605126,0.686334519619568,2.20971958992012,1.53946597556024,2.48759952847963,0.954670618015114,0.949007980743406,0.609958401380546,0.756037385752609,0.627264888043406,1.09181281873089,1.61837215661785,0.661227645802687,0.523511883968059,0.90730481304255,0.621339313086926,1.12738587736838,0.747582730219894,1.15820943319968,0.388902376688095,1.42075805825504,0.844780627453891,1.17357238645754,1.3020438484395,0.524296722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| ||
|short_description=p@chr14:65059503..65059557,+ | |short_description=p@chr14:65059503..65059557,+ | ||
}} | }} |
Latest revision as of 15:41, 4 August 2015
Short description: | p@chr14:65059503..65059557, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65059503..65059557, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.38e-16 | 91 |
multi fate stem cell | 1.38e-16 | 91 |
stem cell | 3.76e-16 | 97 |
neuron | 1.29e-09 | 33 |
neuronal stem cell | 1.29e-09 | 33 |
neuroblast | 1.29e-09 | 33 |
electrically signaling cell | 1.29e-09 | 33 |
CNS neuron (sensu Vertebrata) | 9.96e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.96e-09 | 23 |
hematopoietic cell | 3.97e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.97e-08 | 32 |
hematopoietic stem cell | 3.97e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.97e-08 | 32 |
electrically responsive cell | 8.35e-08 | 39 |
electrically active cell | 8.35e-08 | 39 |
neural cell | 1.28e-07 | 43 |
ectodermal cell | 3.68e-07 | 44 |
neurectodermal cell | 3.68e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.34e-16 | 64 |
neural plate | 5.34e-16 | 64 |
presumptive neural plate | 5.34e-16 | 64 |
central nervous system | 8.51e-16 | 73 |
nervous system | 1.10e-14 | 75 |
pre-chordal neural plate | 2.35e-14 | 49 |
regional part of nervous system | 1.11e-13 | 54 |
regional part of forebrain | 1.42e-12 | 39 |
forebrain | 1.42e-12 | 39 |
future forebrain | 1.42e-12 | 39 |
ectoderm-derived structure | 1.57e-12 | 95 |
ectoderm | 1.57e-12 | 95 |
presumptive ectoderm | 1.57e-12 | 95 |
brain | 2.05e-12 | 47 |
future brain | 2.05e-12 | 47 |
neural tube | 2.33e-12 | 52 |
neural rod | 2.33e-12 | 52 |
future spinal cord | 2.33e-12 | 52 |
neural keel | 2.33e-12 | 52 |
regional part of brain | 3.90e-12 | 46 |
anterior neural tube | 7.36e-12 | 40 |
ecto-epithelium | 1.42e-11 | 73 |
gray matter | 3.92e-10 | 34 |
brain grey matter | 2.04e-09 | 29 |
regional part of telencephalon | 2.04e-09 | 29 |
telencephalon | 2.04e-09 | 29 |
structure with developmental contribution from neural crest | 2.60e-07 | 92 |