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FFCP PHASE1:Mm9::chr4:151713023..151713076,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269610
|EntrezGene=269610
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=A2A8L1
|UniProt=A2A8L1
|association_with_transcript=27bp_to_ENSMUST00000005175_5end
|association_with_transcript=27bp_to_ENSMUST00000005175_5end
|cluster_id=chr4:151713023..151713076,+
|description=CAGE_peak_2_at_Chd5_5end
|description=CAGE_peak_2_at_Chd5_5end
|id=chr4:151713023..151713076,+
|id=chr4:151713023..151713076,+
|ontology_enrichment_celltype=CL:0000117!4.61e-16!23;CL:0000337!4.61e-16!23;CL:0000540!2.01e-13!33;CL:0000047!2.01e-13!33;CL:0000031!2.01e-13!33;CL:0000404!2.01e-13!33;CL:0000221!2.30e-10!44;CL:0000133!2.30e-10!44;CL:0002319!2.89e-10!43;CL:0000393!2.32e-09!39;CL:0000211!2.32e-09!39;CL:0000055!4.96e-07!50
|ontology_enrichment_celltype=CL:0000117!4.61e-16!23;CL:0000337!4.61e-16!23;CL:0000540!2.01e-13!33;CL:0000047!2.01e-13!33;CL:0000031!2.01e-13!33;CL:0000404!2.01e-13!33;CL:0000221!2.30e-10!44;CL:0000133!2.30e-10!44;CL:0002319!2.89e-10!43;CL:0000393!2.32e-09!39;CL:0000211!2.32e-09!39;CL:0000055!4.96e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-21,23;CL:0000337,2.39e-21,23;CL:0000540,2.05e-15,33;CL:0000047,2.05e-15,33;CL:0000031,2.05e-15,33;CL:0000404,2.05e-15,33;CL:0000393,1.20e-11,39;CL:0000211,1.20e-11,39;CL:0002319,1.75e-10,43;CL:0000221,4.77e-10,44;CL:0000133,4.77e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.57e-31!71;UBERON:0003075!5.57e-31!71;UBERON:0007284!5.57e-31!71;UBERON:0004121!2.82e-29!102;UBERON:0000924!2.82e-29!102;UBERON:0006601!2.82e-29!102;UBERON:0001017!1.33e-28!73;UBERON:0005743!1.33e-28!73;UBERON:0000073!1.59e-28!75;UBERON:0001016!1.59e-28!75;UBERON:0001049!3.97e-26!52;UBERON:0005068!3.97e-26!52;UBERON:0006241!3.97e-26!52;UBERON:0007135!3.97e-26!52;UBERON:0000033!7.34e-25!63;UBERON:0000955!8.89e-25!50;UBERON:0006238!8.89e-25!50;UBERON:0002616!5.04e-24!49;UBERON:0003056!1.75e-23!49;UBERON:0003080!7.35e-22!40;UBERON:0002780!4.14e-21!39;UBERON:0001890!4.14e-21!39;UBERON:0006240!4.14e-21!39;UBERON:0002020!5.54e-21!34;UBERON:0002791!2.08e-17!29;UBERON:0003528!2.08e-17!29;UBERON:0001893!2.08e-17!29;UBERON:0007811!1.32e-11!86;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0002619!1.12e-09!17;UBERON:0000153!1.41e-09!94;UBERON:0002021!2.83e-08!10;UBERON:0000411!2.83e-08!10;UBERON:0001950!2.83e-08!10;UBERON:0002420!3.38e-07!8;UBERON:0007245!3.38e-07!8;UBERON:0010009!3.38e-07!8;UBERON:0010011!3.38e-07!8;UBERON:0000454!3.38e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.59e-35,54;UBERON:0001017,2.57e-33,73;UBERON:0002346,9.25e-33,64;UBERON:0003075,9.25e-33,64;UBERON:0007284,9.25e-33,64;UBERON:0001049,1.16e-32,52;UBERON:0005068,1.16e-32,52;UBERON:0006241,1.16e-32,52;UBERON:0007135,1.16e-32,52;UBERON:0001016,6.96e-32,75;UBERON:0000955,7.20e-28,47;UBERON:0006238,7.20e-28,47;UBERON:0002020,1.42e-27,34;UBERON:0002616,7.00e-27,46;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0010371,2.14e-26,73;UBERON:0003080,3.73e-26,40;UBERON:0003056,5.30e-26,49;UBERON:0002780,3.73e-25,39;UBERON:0001890,3.73e-25,39;UBERON:0006240,3.73e-25,39;UBERON:0003528,1.06e-22,29;UBERON:0002791,1.06e-22,29;UBERON:0001893,1.06e-22,29;UBERON:0010314,1.75e-21,92;UBERON:0000956,9.27e-15,21;UBERON:0001869,9.27e-15,21;UBERON:0000203,9.27e-15,21;UBERON:0002619,3.46e-12,17;UBERON:0002021,1.01e-10,10;UBERON:0000411,1.01e-10,10;UBERON:0001950,1.01e-10,10;UBERON:0002420,2.95e-09,8;UBERON:0007245,2.95e-09,8;UBERON:0010009,2.95e-09,8;UBERON:0010011,2.95e-09,8;UBERON:0000454,2.95e-09,8;UBERON:0003076,6.49e-07,12;UBERON:0003057,6.49e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,18.613114399083,14.8117474196169,22.1840991227163,0,0,0,0,0,0.599200221036809,1.15265491596466,2.59224030771194,4.18518408828241,2.73422449756797,16.2821061110168,12.8103753751936,8.32937434661688,9.4887016308054,8.27296907949019,9.91042928994498,17.2377906415003,17.3575382579555,18.2003077067668,25.5250525650723,28.129322010065,13.4007839520663,13.5063026407603,16.5022107598955,11.490514833473,18.0812034614861,18.8263440283554,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,1.03909497345377,0.520455980298408,2.13125834818499,2.30615497256059,1.95939432718409,2.93971767839262,0.502666365318702,0,0,0,0,0,0,0,2.34224637609238,2.30391377494801,0.510914110417183,0,0,0,16.4769703345305,12.3525162761029,22.6177833803156,21.5542157038423,21.4800984157478,15.584103341967,14.6017136760982,0.101839363850316,0,0,1.26265113531884,0.130120442962704,0.229902104433473,0.720248519221397,1.65775299619287,1.7009124787832,1.92170580427275,2.34254311399322,4.13925393182425,0,0,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0379768109759,13.1717903845484,0,0.264450566663544,0.426576501070468,0,0.902072229254653,0.605050573870028,0.22237804384487,0.380451252225118,0,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63303539926752,12.4244387787735,0,0,0.94652465824877,1.17131623288992,1.93881057959519,0,0.222798674082394,0.283076530788832,0,0,2.37172666767914,15.7447445046685,0,0.178065603667255,0.162886959353576,0,0,0,0.906970670894253,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0,0,0,9.53230896110606,0.18006109403131,0.129358683782755,0.857348140126369,7.62563004661776,3.74574516964348,5.26556865926787,4.87143918583359,0,0,0.441056796109924,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,7.78786268444141,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0,0,0.209718688851422,0,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,22.0253218620656,22.5559365888517,14.3223878359849,19.9349691518678,9.59115527678899,13.5970901530146,16.8755625057951,8.10578165803597,14.0474146785103,19.1571315348173,0,1.19707462020309,1.70733605754134,1.45864030240976,1.67690530102386,5.51530525350042,0.44449345560323,2.26638562962784,1.92551525755089,1.51618327058278,3.04175159868288,2.64076877940507,2.52832070168682,3.00918216302886,3.61843454420364,0.952587382566147,3.01299247456624,2.89363830695558,0.412085900803307,3.23837624295674,2.74295401908332,2.8396128985494,4.29185141905178,2.76158191601424,1.97629698872194,2.70766745253365,3.65855945745545,3.41990624869196,2.71608227691724,3.92799590160417,3.2031454893527,3.25064791839359,2.45538625901814,3.25367366490529,1.92906610981141,5.74564329257276,3.27504251823572,3.43793686477277,0.57386499620653,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,18.613114399083,14.8117474196169,22.1840991227163,0,0,0,0,0,0.599200221036809,1.15265491596466,2.59224030771194,4.18518408828241,2.73422449756797,16.2821061110168,12.8103753751936,8.32937434661688,9.4887016308054,8.27296907949019,9.91042928994498,17.2377906415003,17.3575382579555,18.2003077067668,25.5250525650723,28.129322010065,13.4007839520663,13.5063026407603,16.5022107598955,11.490514833473,18.0812034614861,18.8263440283554,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0,1.03909497345377,0.520455980298408,2.13125834818499,2.30615497256059,1.95939432718409,2.93971767839262,0.502666365318702,0,0,0,0,0,0,0,2.34224637609238,2.30391377494801,0.510914110417183,0,0,0,16.4769703345305,12.3525162761029,22.6177833803156,21.5542157038423,21.4800984157478,15.584103341967,14.6017136760982,0.101839363850316,0,0,1.26265113531884,0.130120442962704,0.229902104433473,0.720248519221397,1.65775299619287,1.7009124787832,1.92170580427275,2.34254311399322,4.13925393182425,0,0,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0379768109759,13.1717903845484,0,0.264450566663544,0.426576501070468,0,0.902072229254653,0.605050573870028,0.22237804384487,0.380451252225118,0,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63303539926752,12.4244387787735,0,0,0.94652465824877,1.17131623288992,1.93881057959519,0,0.222798674082394,0.283076530788832,0,0,2.37172666767914,15.7447445046685,0,0.178065603667255,0.162886959353576,0,0,0,0.906970670894253,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0,0,0,9.53230896110606,0.18006109403131,0.129358683782755,0.857348140126369,7.62563004661776,3.74574516964348,5.26556865926787,4.87143918583359,0,0,0.441056796109924,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,7.78786268444141,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0,0,0.209718688851422,0,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,22.0253218620656,22.5559365888517,14.3223878359849,19.9349691518678,9.59115527678899,13.5970901530146,16.8755625057951,8.10578165803597,14.0474146785103,19.1571315348173,0,1.19707462020309,1.70733605754134,1.45864030240976,1.67690530102386,5.51530525350042,0.44449345560323,2.26638562962784,1.92551525755089,1.51618327058278,3.04175159868288,2.64076877940507,2.52832070168682,3.00918216302886,3.61843454420364,0.952587382566147,3.01299247456624,2.89363830695558,0.412085900803307,3.23837624295674,2.74295401908332,2.8396128985494,4.29185141905178,2.76158191601424,1.97629698872194,2.70766745253365,3.65855945745545,3.41990624869196,2.71608227691724,3.92799590160417,3.2031454893527,3.25064791839359,2.45538625901814,3.25367366490529,1.92906610981141,5.74564329257276,3.27504251823572,3.43793686477277,0.57386499620653,0.441182838239031,0
|short_description=p2@Chd5
|short_description=p2@Chd5
}}
}}

Latest revision as of 19:06, 26 September 2015

Short description:p2@Chd5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Chd5_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 27bp_to_ENSMUST00000005175_5end
EntrezGene:Chd5
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Chd5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C318.61
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.48
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F122.62
cortex, adult.CNhs10473.12-14D521.55
cortex, neonate N30.CNhs11107.1392-42F221.48
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B214.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.04
hippocampus, neonate N00.CNhs11228.627-43G113.17
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A312.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.39e-2123
neuroblast (sensu Vertebrata)2.39e-2123
neuron2.05e-1533
neuronal stem cell2.05e-1533
neuroblast2.05e-1533
electrically signaling cell2.05e-1533
electrically responsive cell1.20e-1139
electrically active cell1.20e-1139
neural cell1.75e-1043
ectodermal cell4.77e-1044
neurectodermal cell4.77e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.59e-3554
central nervous system2.57e-3373
neurectoderm9.25e-3364
neural plate9.25e-3364
presumptive neural plate9.25e-3364
neural tube1.16e-3252
neural rod1.16e-3252
future spinal cord1.16e-3252
neural keel1.16e-3252
nervous system6.96e-3275
brain7.20e-2847
future brain7.20e-2847
gray matter1.42e-2734
regional part of brain7.00e-2746
ectoderm-derived structure1.17e-2695
ectoderm1.17e-2695
presumptive ectoderm1.17e-2695
ecto-epithelium2.14e-2673
anterior neural tube3.73e-2640
pre-chordal neural plate5.30e-2649
regional part of forebrain3.73e-2539
forebrain3.73e-2539
future forebrain3.73e-2539
brain grey matter1.06e-2229
regional part of telencephalon1.06e-2229
telencephalon1.06e-2229
structure with developmental contribution from neural crest1.75e-2192
cerebral cortex9.27e-1521
cerebral hemisphere9.27e-1521
pallium9.27e-1521
regional part of cerebral cortex3.46e-1217
occipital lobe1.01e-1010
visual cortex1.01e-1010
neocortex1.01e-1010
basal ganglion2.95e-098
nuclear complex of neuraxis2.95e-098
aggregate regional part of brain2.95e-098
collection of basal ganglia2.95e-098
cerebral subcortex2.95e-098
posterior neural tube6.49e-0712
chordal neural plate6.49e-0712
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