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FFCP PHASE1:Mm9::chr4:148960541..148960620,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=65945
|EntrezGene=65945
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9EPL2
|UniProt=Q9EPL2
|association_with_transcript=0bp_to_ENSMUST00000105691_5end
|association_with_transcript=0bp_to_ENSMUST00000105691_5end
|cluster_id=chr4:148960541..148960620,+
|description=CAGE_peak_1_at_Clstn1_5end
|description=CAGE_peak_1_at_Clstn1_5end
|id=chr4:148960541..148960620,+
|id=chr4:148960541..148960620,+
|ontology_enrichment_celltype=CL:0000117!7.68e-11!23;CL:0000337!7.68e-11!23;CL:0000221!9.69e-11!44;CL:0000133!9.69e-11!44;CL:0002319!2.14e-10!43;CL:0000055!1.93e-09!50;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000540!4.65e-07!33;CL:0000047!4.65e-07!33;CL:0000031!4.65e-07!33;CL:0000404!4.65e-07!33;CL:0000393!7.85e-07!39;CL:0000211!7.85e-07!39
|ontology_enrichment_celltype=CL:0000117!7.68e-11!23;CL:0000337!7.68e-11!23;CL:0000221!9.69e-11!44;CL:0000133!9.69e-11!44;CL:0002319!2.14e-10!43;CL:0000055!1.93e-09!50;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000540!4.65e-07!33;CL:0000047!4.65e-07!33;CL:0000031!4.65e-07!33;CL:0000404!4.65e-07!33;CL:0000393!7.85e-07!39;CL:0000211!7.85e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-11,23;CL:0000337,7.67e-11,23;CL:0000221,9.69e-11,44;CL:0000133,9.69e-11,44;CL:0002319,2.14e-10,43;CL:0002321,4.43e-09,70;CL:0000540,4.64e-07,33;CL:0000047,4.64e-07,33;CL:0000031,4.64e-07,33;CL:0000404,4.64e-07,33;CL:0000393,7.84e-07,39;CL:0000211,7.84e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.59e-26!63;UBERON:0000073!1.11e-25!75;UBERON:0001016!1.11e-25!75;UBERON:0001017!1.16e-25!73;UBERON:0005743!1.16e-25!73;UBERON:0004121!6.67e-25!102;UBERON:0000924!6.67e-25!102;UBERON:0006601!6.67e-25!102;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!2.21e-23!50;UBERON:0006238!2.21e-23!50;UBERON:0002616!6.58e-23!49;UBERON:0002346!1.34e-20!71;UBERON:0003075!1.34e-20!71;UBERON:0007284!1.34e-20!71;UBERON:0003056!8.59e-19!49;UBERON:0002020!3.23e-18!34;UBERON:0003080!1.37e-17!40;UBERON:0002780!5.74e-17!39;UBERON:0001890!5.74e-17!39;UBERON:0006240!5.74e-17!39;UBERON:0002791!1.87e-15!29;UBERON:0003528!1.87e-15!29;UBERON:0001893!1.87e-15!29;UBERON:0007811!6.45e-14!86;UBERON:0000153!5.99e-13!94;UBERON:0000956!1.00e-11!21;UBERON:0001869!1.00e-11!21;UBERON:0000203!1.00e-11!21;UBERON:0002619!1.64e-10!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0003076!1.95e-07!12;UBERON:0003057!1.95e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.79e-28,95;UBERON:0000924,6.79e-28,95;UBERON:0006601,6.79e-28,95;UBERON:0000073,6.57e-26,54;UBERON:0001016,1.11e-25,75;UBERON:0001017,1.16e-25,73;UBERON:0010371,2.00e-24,73;UBERON:0001049,2.10e-24,52;UBERON:0005068,2.10e-24,52;UBERON:0006241,2.10e-24,52;UBERON:0007135,2.10e-24,52;UBERON:0002346,3.23e-24,64;UBERON:0003075,3.23e-24,64;UBERON:0007284,3.23e-24,64;UBERON:0000955,2.50e-21,47;UBERON:0006238,2.50e-21,47;UBERON:0002616,7.31e-21,46;UBERON:0003056,8.58e-19,49;UBERON:0002020,3.22e-18,34;UBERON:0003080,1.37e-17,40;UBERON:0002780,5.73e-17,39;UBERON:0001890,5.73e-17,39;UBERON:0006240,5.73e-17,39;UBERON:0003528,1.86e-15,29;UBERON:0002791,1.86e-15,29;UBERON:0001893,1.86e-15,29;UBERON:0010314,9.20e-14,92;UBERON:0000956,1.00e-11,21;UBERON:0001869,1.00e-11,21;UBERON:0000203,1.00e-11,21;UBERON:0002619,1.63e-10,17;UBERON:0011216,4.78e-09,194;UBERON:0002021,3.37e-08,10;UBERON:0000411,3.37e-08,10;UBERON:0001950,3.37e-08,10;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12
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84.8089252028256,118.856930508574,374.046266478329,11.2738587736838,35.285904866379,29.2861528109063,52.3073696645488,55.0220848015135,46.9698028864363,45.6519658331983,49.7380750103889,106.012797214394,41.794052902899,29.955120650818,30.9690898215615,99.9435311380509,101.06758185019,62.102153383386,49.9484480912273,35.1665997962839,21.3947900145545,21.4149814403137,13.2266049432073,14.47929326445,9.07435666231565,15.0085136339219,10.4870907387959,12.6227054356094,90.2386926788541,33.7418649128578,17.4942020388478,29.0440386309856,107.220224687866,44.8561116328325,103.297516086738,106.112347644138,128.402458633053,626.874545304944,626.962972122775,661.121422509064,845.86136349563,707.690242923073,665.502023600326,639.921330219752,622.343902855873,622.617669944297,691.21001618868,23.7673025967765,77.4108254398,58.561626773668,61.992212852415,37.3111429477809,43.5709115026533,67.3407585238894,71.9062349763741,69.9603876910157,65.1958806350598,72.7485590684988,69.7917463128482,63.5825835720502,70.1075418833319,63.121580382219,72.8729347663103,74.0500842787627,69.2544101464701,64.2854005253158,64.473127018866,60.6878576722185,56.0823547463506,60.0859198667249,72.8185547327966,68.888066464022,70.6531975895499,64.9394303698343,51.824733153255,63.1489129383257,65.6536457839554,77.8245718894582,69.5441645571478,58.9292702164353,64.6086627745478,78.5129906693245,145.389756359885,75.7938411363123,87.6673900517057,72.115701189954,80.5158679786232,53.5614700283174
|phase1_expression=102.495262147068,101.551843623054,98.7348349475293,320.007135562626,337.603721983838,90.8226861043324,96.2484079253566,9.42600261123507,3.09735188733667,2.34064526321993,5.99262888789267,7.17949430958028,3.59521532855532,4.54586092578786,2.99798785634096,3.03712901084739,2.09868563438444,2.20823515750766,4.11343300817216,2.12194825899015,121.186688465274,8.73760370567791,9.66439219814061,63.5169918489824,62.1699151692031,84.412098724908,79.2602072932698,56.0225204983311,149.35840769271,141.640932925081,58.980315834311,0.635030673459631,0.61506478758457,0,45.0608526811988,40.7274881128306,47.7756293653944,0,0,0.523523743973798,0,0,0,96.0592721153655,101.275554288295,61.671708726325,255.059578257461,291.281608924277,402.904459135021,407.136208661549,133.827019073847,251.5669876387,1.51004345451963,11.6057942721815,9.41062637598899,67.1447128053822,73.066027184383,62.911995257848,233.068562910257,234.343003817511,292.196277016349,96.5706916397026,127.169155843893,36.8958884085374,44.4989863155138,49.0231279312809,176.46446509534,237.831130994042,110.014678659295,136.220991776676,127.87757650164,368.489769880907,331.081942886469,113.793952470692,99.4875989169293,134.205942845063,408.529918507732,447.033370636242,418.424196590007,200.071498486704,201.730254143313,175.026892507071,408.165544540019,253.805937124288,319.348337853533,330.278644315981,298.126299593322,262.264020276198,96.1722655331437,71.9441252216598,52.7553369437054,11.185510400758,0,4.85732872474035,2.59910566979068,0.896053774194671,64.4639888404741,77.2049361278602,57.412707017234,63.2477838373509,149.998242062165,111.644035350457,163.075353412253,191.988009851399,100.018860947181,95.5166692841122,106.665657898119,58.0054108972825,18.9024655062435,82.0885029028481,44.0652729985985,45.0608907901969,43.1250979868829,38.2835507003661,49.387256996996,55.6702999590462,12.8541383221874,61.0209286202027,21.230653246797,47.3976870345909,21.2007857721978,24.2437626567611,143.521656137954,287.510742665339,297.833217088733,127.728527604296,5.15205035375457,4.79922184794726,3.04968544975355,380.618014727654,338.092945482965,179.43441481717,518.865595773945,522.682394783196,373.810692162649,326.104938766193,77.4997558900907,35.2071726826563,51.8081654789033,242.639459837104,61.937330850247,66.2118060768402,81.0279584124071,78.0650956389004,136.889436292472,129.266743767413,184.311292208987,278.62353028592,64.6703978798527,57.6773544511849,65.1019159406611,61.8131965445761,71.7361903002043,75.222467968788,74.4931333796755,46.5740184355274,0.702213187313235,2.05878325691772,1.42081749697796,33.3472493782158,25.5633405379395,30.0703642639895,39.2996261071449,25.9728785906573,27.7680803197281,24.6485981435432,28.9735273511589,28.0236821681207,29.9498926842534,39.2360239149038,63.476877874405,54.2401953347983,51.1551768628148,59.7218563483654,319.640721817473,194.489717396848,170.49609201964,89.9131926656051,40.7380558522297,39.0157608725537,61.3409115893164,75.2279546845068,79.6113396964636,92.0692030384786,106.294509785971,93.0549094190661,90.7320103768973,108.431277262427,97.4820435595601,83.5902050048426,89.2650145982487,111.120830475937,55.3830270782998,46.3848961195499,47.3372489826938,49.894575322102,51.7853140737561,58.9140887078676,71.6469965617835,46.9400270575135,56.8335394785777,55.8989152565756,8.00422093135302,7.84171996865642,10.2210677458866,2.9232074610031,4.05720242777006,3.85883455603867,8.14802725700543,11.5078454980324,5.99900339067631,5.21666685057355,10.0637744569148,17.4906245404197,5.30464044294753,6.81962970457202,3.58794827043824,4.3419916922703,156.485952071114,43.772516118982,51.8228625085642,50.9235257325564,56.560349837529,75.5453221062589,96.4076745588356,85.6636714095737,113.024398324139,117.819214893148,136.014917664837,130.926788457875,120.534117342395,134.234326363643,3.01582567878545,5.4390568381871,117.53166125155,124.447472583434,348.555330863496,321.277232949229,57.8690357179664,40.647819279904,50.7968233260173,55.8327404344193,62.9036321379773,51.3782915597987,48.7929096240443,68.7875969816863,42.100312974189,50.560263418657,55.3402889125133,231.993990456545,73.6669042230914,71.9385038815711,83.8867840670917,133.460829484781,335.845200000106,40.7871468740369,48.0694455573954,95.4341703564844,143.221418047175,141.727603202151,89.1577611430363,107.242450195864,100.175763326107,153.277827598871,254.058846665747,268.152412445286,136.856721513023,63.3815050990212,79.2968731588285,89.378543608174,91.3302203257709,117.723419617367,102.514039835121,138.836016796257,21.8244688499251,30.9274823461177,155.913577424858,86.0706240354526,88.4825058293562,59.1066664295927,58.0149591855243,63.5225282013387,97.9375611076298,324.865129122413,11.619219894254,31.1644170624466,17.7786746274923,9.60679130723924,4.92099219795691,7.0921233694022,12.7483822495391,13.5752908753948,12.4379976423981,100.240414891587,55.2006308799081,63.6389932107036,56.8108092722675,62.7264888043406,63.98023117763,63.5211071472506,88.8524649047361,84.8089252028256,118.856930508574,374.046266478329,11.2738587736838,35.285904866379,29.2861528109063,52.3073696645488,55.0220848015135,46.9698028864363,45.6519658331983,49.7380750103889,106.012797214394,41.794052902899,29.955120650818,30.9690898215615,99.9435311380509,101.06758185019,62.102153383386,49.9484480912273,35.1665997962839,21.3947900145545,21.4149814403137,13.2266049432073,14.47929326445,9.07435666231565,15.0085136339219,10.4870907387959,12.6227054356094,90.2386926788541,33.7418649128578,17.4942020388478,29.0440386309856,107.220224687866,44.8561116328325,103.297516086738,106.112347644138,128.402458633053,626.874545304944,626.962972122775,661.121422509064,845.86136349563,707.690242923073,665.502023600326,639.921330219752,622.343902855873,622.617669944297,691.21001618868,23.7673025967765,77.4108254398,58.561626773668,61.992212852415,37.3111429477809,43.5709115026533,67.3407585238894,71.9062349763741,69.9603876910157,65.1958806350598,72.7485590684988,69.7917463128482,63.5825835720502,70.1075418833319,63.121580382219,72.8729347663103,74.0500842787627,69.2544101464701,64.2854005253158,64.473127018866,60.6878576722185,56.0823547463506,60.0859198667249,72.8185547327966,68.888066464022,70.6531975895499,64.9394303698343,51.824733153255,63.1489129383257,65.6536457839554,77.8245718894582,69.5441645571478,58.9292702164353,64.6086627745478,78.5129906693245,145.389756359885,75.7938411363123,87.6673900517057,72.115701189954,80.5158679786232,53.5614700283174
|short_description=p1@Clstn1
|short_description=p1@Clstn1
}}
}}

Latest revision as of 17:43, 26 September 2015

Short description:p1@Clstn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clstn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000105691_5end
EntrezGene:Clstn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clstn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7102.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5101.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I698.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I3320.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I4337.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I790.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I896.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3121.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D163.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D262.17
GP2+ M cell, pool1.CNhs13228.11845-124H984.41
GP2+ M cell, pool2.CNhs13231.11846-124I179.26
GP2+ M cell, pool3.CNhs13240.11847-124I256.02
Ileum epithelium, pool1.CNhs13199.10252-104B9149.36
Ileum epithelium, pool2.CNhs13232.10253-104C1141.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C858.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F640.73
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F747.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D896.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9101.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B361.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7255.06
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2291.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8402.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3407.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C4133.83
Mouse Astrocytes, donor3.CNhs12107.11633-122C4251.57
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C167.14
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E173.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C562.91
Mouse Granule cells, donor1.CNhs12131.11713-123C3233.07
Mouse Granule cells, donor2.CNhs12357.11731-123E3234.34
Mouse Granule cells, donor3.CNhs12108.11636-122C7292.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C696.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1127.17
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E744.50
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D249.02
Mouse Microglia, donor1.CNhs12629.11718-123C8176.46
Mouse Microglia, donor2.CNhs12634.11736-123E8237.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5110.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5136.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9127.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1368.49
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5331.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2113.79
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F299.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6134.21
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3408.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3447.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7418.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4200.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4201.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8175.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4408.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5253.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6319.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6330.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6298.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1262.26
Mouse Schwann, donor1.CNhs12507.11728-123D996.17
Mouse Schwann, donor2.CNhs12573.11746-123F971.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G352.76
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A764.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I777.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E357.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I863.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6150.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1111.64
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8163.08
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6191.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1100.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G295.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3106.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B658.01
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D782.09
adrenal gland, embryo E14.CNhs11038.406-44C544.07
adrenal gland, embryo E16.CNhs11004.1254-43D645.06
adrenal gland, embryo E17.CNhs11043.1263-45I143.13
adrenal gland, embryo E18.CNhs11026.1262-18F538.28
adrenal gland, neonate N00.CNhs11191.1311-23C149.39
adrenal gland, neonate N25.CNhs11223.1377-27I355.67
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H161.02
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F547.40
bone (os femoris), neonate N16.CNhs11225.1525-43A621.20
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H4143.52
cerebellum, adult.CNhs10494.15-8B2287.51
cerebellum, neonate N30.CNhs11135.1395-42I2297.83
colon, adult.CNhs10468.36-18H7127.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A4380.62
corpus striatum, adult.CNhs10487.19-21D8338.09
corpus striatum, neonate N00.CNhs11226.630-43F1179.43
cortex, adult.CNhs10473.12-14D5518.87
cortex, neonate N30.CNhs11107.1392-42F2522.68
diencephalon, adult.CNhs10482.20-12F2373.81
diencephalon, neonate N30.CNhs11201.1388-42B2326.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B177.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A235.21
epididymis, adult.CNhs10490.58-23B251.81
eyeball, adult.CNhs10484.31-12G4242.64
eyeball, embryo E12.CNhs11016.345-16C661.94
eyeball, embryo E14.CNhs10521.399-16E266.21
eyeball, embryo E15.CNhs10593.426-16C981.03
eyeball, embryo E17.CNhs11023.1261-18D478.07
eyeball, neonate N00.CNhs11207.633-15C6136.89
eyeball, neonate N01.CNhs11140.1532-43E7129.27
eyeball, neonate N02.CNhs11205.1551-44G8184.31
eyeball, neonate N16.CNhs11188.777-19A2278.62
forelimb, embryo E11.CNhs10596.335-25E264.67
forelimb, embryo E12.CNhs10600.359-14H257.68
forelimb, embryo E13.CNhs10589.384-1E265.10
forelimb, embryo E14.CNhs10577.413-26A861.81
forelimb, embryo E15.CNhs11007.437-20E771.74
forelimb, embryo E17.CNhs10598.1517-43C475.22
forelimb, embryo E18.CNhs11008.1520-43B574.49
gonad, embryo E13.CNhs11044.1564-45I646.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E933.35
heart, embryo E12.CNhs11015.353-12F525.56
heart, embryo E13.CNhs11013.376-3I930.07
heart, embryo E14.CNhs10597.403-26D439.30
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C627.77
heart, embryo E17.CNhs11025.479-18E524.65
heart, embryo E18.CNhs11030.1283-20G328.97
heart, neonate N00.CNhs11213.639-21E328.02
heart, neonate N03.CNhs11221.1349-25I229.95
heart, neonate N10.CNhs11118.749-24G139.24
heart, neonate N16.CNhs11209.782-15G163.48
heart, neonate N20.CNhs11127.821-26I654.24
heart, neonate N25.CNhs11196.1351-25D351.16
heart, neonate N30.CNhs11202.1390-42D259.72
hippocampus, adult.CNhs10478.13-16E8319.64
hippocampus, neonate N00.CNhs11228.627-43G1194.49
intestinal mucosa, adult.CNhs10506.860-29I3170.50
intestine, adult.CNhs10496.178-9A389.91
intestine, embryo E12.CNhs11019.1251-16I540.74
intestine, embryo E13.CNhs11010.381-16D539.02
intestine, embryo E15.CNhs10602.976-16D861.34
intestine, embryo E16.CNhs10585.463-22H475.23
intestine, embryo E17.CNhs10582.482-18D379.61
intestine, embryo E18.CNhs10526.1289-20F792.07
intestine, neonate N00.CNhs11126.644-26D1106.29
intestine, neonate N01.CNhs11192.1322-23E993.05
intestine, neonate N06.CNhs11102.688-20B890.73
intestine, neonate N07.CNhs11095.720-20F2108.43
intestine, neonate N10.CNhs11098.755-23A597.48
intestine, neonate N20.CNhs11187.827-18D183.59
intestine, neonate N25.CNhs11121.1352-25E389.27
intestine, neonate N30.CNhs11131.1384-42G1111.12
kidney, embryo E14.CNhs10606.411-4I955.38
kidney, embryo E15.CNhs10997.434-16F846.38
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I249.89
kidney, embryo E18.CNhs11001.1288-20C751.79
kidney, neonate N00.CNhs11214.646-21G758.91
kidney, neonate N10.CNhs11206.758-6D571.65
kidney, neonate N20.CNhs11113.832-19I146.94
kidney, neonate N25.CNhs11122.1353-25F356.83
kidney, neonate N30.CNhs11203.1385-42H155.90
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H217.49
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B1156.49
lung, embryo E12.CNhs10522.354-16G243.77
lung, embryo E14.CNhs10604.404-26F851.82
lung, embryo E15.CNhs11020.432-17C550.92
lung, embryo E16.CNhs10998.458-17B656.56
lung, embryo E17.CNhs10605.480-44A675.55
lung, embryo E18.CNhs10583.1287-20I696.41
lung, neonate N00.CNhs11224.640-42C685.66
lung, neonate N06.CNhs11212.683-20E5113.02
lung, neonate N07.CNhs11111.715-19A3117.82
lung, neonate N10.CNhs11219.750-23E6136.01
lung, neonate N20.CNhs11109.822-18A4130.93
lung, neonate N25.CNhs11119.1359-25C7120.53
lung, neonate N30.CNhs11133.1394-42H2134.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B6117.53
mammary gland, adult pregnant day19.CNhs10476.588-5H2124.45
medulla oblongata, adult.CNhs10477.17-12C2348.56
medulla oblongata, neonate N30.CNhs11200.1396-42A3321.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C757.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C240.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E150.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E255.83
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E362.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D751.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D848.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D968.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D550.56
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D655.34
olfactory brain, adult.CNhs10489.18-22I9231.99
ovary, adult.CNhs10507.91-2I773.67
ovary, embryo E18.CNhs11040.505-44H771.94
ovary, neonate N00.CNhs11217.1299-22I483.89
oviduct, adult pregnant day01.CNhs10500.988-6G6133.46
pancreas, adult.CNhs10486.34-16E4335.85
pancreas, embryo E14.CNhs11012.405-44F440.79
pancreas, embryo E15.CNhs11042.1556-45F248.07
pancreas, embryo E16.CNhs11003.460-26E595.43
pancreas, embryo E17.CNhs10599.1558-45G3143.22
pancreas, embryo E18.CNhs10580.1535-43I7141.73
pancreas, neonate N00.CNhs11105.645-26G989.16
pancreas, neonate N01.CNhs11138.1531-43D7107.24
pancreas, neonate N02.CNhs11139.1539-43D8100.18
pancreas, neonate N16.CNhs11136.787-43B6153.28
pancreas, neonate N25.CNhs11094.1555-45E2254.06
pancreas, neonate N30.CNhs11182.1548-44H5268.15
pituitary gland, adult.CNhs10493.21-1G8136.86
pituitary gland, embryo E12.CNhs11018.346-16E663.38
pituitary gland, embryo E13.CNhs11009.370-44C779.30
pituitary gland, embryo E14.CNhs11037.398-44A589.38
pituitary gland, embryo E15.CNhs10592.427-16B991.33
pituitary gland, embryo E16.CNhs11036.449-43F6117.72
pituitary gland, embryo E17.CNhs11039.1265-44F5102.51
pituitary gland, neonate N00.CNhs11190.1308-22E9138.84
placenta, adult pregnant day10.CNhs10472.539-13I721.82
placenta, adult pregnant day17.CNhs10464.577-18G330.93
prostate, adult.CNhs10470.859-1F8155.91
skin, adult.CNhs10492.30-1C386.07
skin, neonate N00.CNhs11124.650-25G488.48
skin, neonate N03.CNhs11215.662-22H359.11
skin, neonate N06.CNhs11097.693-20I558.01
skin, neonate N10.CNhs11108.762-6C463.52
small intestine, neonate N16.CNhs11114.790-21I197.94
spinal cord, adult.CNhs10505.24-13C9324.87
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C131.16
spleen, embryo E18.CNhs11011.1271-21F217.78
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H14.92
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.44
stomach, adult.CNhs10503.33-1H6100.24
stomach, embryo E12.CNhs10588.356-43E355.20
stomach, embryo E15.CNhs10603.1252-16G863.64
stomach, embryo E16.CNhs11022.459-17D456.81
stomach, embryo E17.CNhs11006.1035-18D562.73
stomach, embryo E18.CNhs10999.1286-20C663.98
stomach, neonate N03.CNhs11193.1340-24B863.52
stomach, neonate N07.CNhs11210.718-18A988.85
stomach, neonate N25.CNhs11104.1355-25E484.81
stomach, neonate N30.CNhs11134.1386-42I1118.86
submandibular gland, adult.CNhs10469.59-29C1374.05
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F535.29
testis, embryo E15.CNhs11034.443-27C529.29
testis, embryo E16.CNhs11033.470-26G552.31
testis, embryo E17.CNhs11029.486-18I555.02
testis, embryo E18.CNhs11027.503-18G546.97
testis, neonate N00.CNhs11189.1300-22B745.65
testis, neonate N07.CNhs11222.726-26I449.74
testis, neonate N10.CNhs11204.763-44D9106.01
testis, neonate N20.CNhs11110.839-18H341.79
testis, neonate N30.CNhs11130.1391-42E229.96
thymus, adult.CNhs10471.38-12B530.97
thymus, embryo E14.CNhs11041.402-44I499.94
thymus, embryo E15.CNhs11005.430-45I2101.07
thymus, embryo E16.CNhs11002.456-26C562.10
thymus, embryo E17.CNhs10581.478-18C149.95
thymus, embryo E18.CNhs10595.1273-19G435.17
thymus, neonate N02.CNhs11181.1541-43F821.39
thymus, neonate N03.CNhs11137.2104-43C721.41
thymus, neonate N06.CNhs11197.681-26C413.23
thymus, neonate N07.CNhs11211.713-19D314.48
thymus, neonate N10.CNhs11194.748-24E49.07
thymus, neonate N20.CNhs11186.820-7A215.01
thymus, neonate N25.CNhs11125.1362-25G710.49
thymus, neonate N30.CNhs11132.1393-42G212.62
tongue, adult.CNhs10499.32-1B490.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H333.74
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G529.04
urinary bladder, adult.CNhs10481.879-12E4107.22
uterus, adult pregnant day19.CNhs10497.590-15F544.86
uterus, adult.CNhs10509.92-27E5103.30
vagina, adult.CNhs10502.89-27D5106.11
vesicular gland, adult.CNhs10491.51-27F8128.40
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1626.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2626.96
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3661.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7845.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4707.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5665.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6639.92
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7622.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8622.62
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9691.21
whole body, embryo E11.CNhs11014.324-5I823.77
whole body, embryo E12.CNhs10587.857-27C977.41
whole body, embryo E13.CNhs10512.372-23H258.56
whole body, embryo E14.5.CNhs10578.420-27D261.99
whole body, embryo E14.CNhs10519.395-14B137.31
whole body, embryo E16.CNhs10514.453-14F243.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G567.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G571.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G569.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G565.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G572.75
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G569.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G563.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G570.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G563.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G572.87
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G569.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G564.29
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G564.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G560.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G556.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G560.09
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G572.82
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G568.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G570.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G564.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G551.82
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G563.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G565.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G577.82
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G569.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G558.93
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G564.61
whole body, embryo E17.5.CNhs10513.490-9F978.51
whole body, embryo E17.CNhs10517.475-3I5145.39
whole body, embryo E18.CNhs10516.493-3B375.79
whole body, neonate N00.CNhs10525.657-19C287.67
whole body, neonate N01.CNhs10576.659-23C672.12
whole body, neonate N06.CNhs10515.692-21D180.52
whole body, neonate N10.CNhs10518.761-6B453.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.67e-1123
neuroblast (sensu Vertebrata)7.67e-1123
ectodermal cell9.69e-1144
neurectodermal cell9.69e-1144
neural cell2.14e-1043
embryonic cell4.43e-0970
neuron4.64e-0733
neuronal stem cell4.64e-0733
neuroblast4.64e-0733
electrically signaling cell4.64e-0733
electrically responsive cell7.84e-0739
electrically active cell7.84e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure6.79e-2895
ectoderm6.79e-2895
presumptive ectoderm6.79e-2895
regional part of nervous system6.57e-2654
nervous system1.11e-2575
central nervous system1.16e-2573
ecto-epithelium2.00e-2473
neural tube2.10e-2452
neural rod2.10e-2452
future spinal cord2.10e-2452
neural keel2.10e-2452
neurectoderm3.23e-2464
neural plate3.23e-2464
presumptive neural plate3.23e-2464
brain2.50e-2147
future brain2.50e-2147
regional part of brain7.31e-2146
pre-chordal neural plate8.58e-1949
gray matter3.22e-1834
anterior neural tube1.37e-1740
regional part of forebrain5.73e-1739
forebrain5.73e-1739
future forebrain5.73e-1739
brain grey matter1.86e-1529
regional part of telencephalon1.86e-1529
telencephalon1.86e-1529
structure with developmental contribution from neural crest9.20e-1492
cerebral cortex1.00e-1121
cerebral hemisphere1.00e-1121
pallium1.00e-1121
regional part of cerebral cortex1.63e-1017
organ system subdivision4.78e-09194
occipital lobe3.37e-0810
visual cortex3.37e-0810
neocortex3.37e-0810
posterior neural tube1.95e-0712
chordal neural plate1.95e-0712
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