FFCP PHASE1:Mm9::chr6:72185210..72185228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71093 | |EntrezGene=71093 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2449 | |||
|TSSclassifier=NA | |||
|UniProt=Q99NA2 | |UniProt=Q99NA2 | ||
|association_with_transcript=342bp_to_ENSMUST00000042646,NM_153778,uc009cic.1,uc012enh.1_5end | |association_with_transcript=342bp_to_ENSMUST00000042646,NM_153778,uc009cic.1,uc012enh.1_5end | ||
|cluster_id=chr6:72185210..72185228,- | |||
|description=CAGE_peak_3_at_Atoh8_5end | |description=CAGE_peak_3_at_Atoh8_5end | ||
|id=chr6:72185210..72185228,- | |id=chr6:72185210..72185228,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.48e-08,8;CL:0000333,7.46e-07,10;CL:0000095,7.46e-07,10;CL:0000243,7.46e-07,10;CL:0000123,7.46e-07,10;CL:0000125,7.46e-07,10;CL:0000030,7.46e-07,10;CL:0000339,7.46e-07,10;CL:0000222,9.25e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.46e-08!23;UBERON:0001009!7.46e-08!23;UBERON:0004872!7.68e-07!33;UBERON:0002048!9.69e-07!14;UBERON:0000117!9.69e-07!14;UBERON:0000171!9.69e-07!14;UBERON:0000170!9.69e-07!14;UBERON:0005597!9.69e-07!14;UBERON:0000118!9.69e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.87e-09,23;UBERON:0001009,4.87e-09,23;UBERON:0002100,1.19e-07,90;UBERON:0004872,1.40e-07,33;UBERON:0002048,1.64e-07,14;UBERON:0000117,1.64e-07,14;UBERON:0000171,1.64e-07,14;UBERON:0000170,1.64e-07,14;UBERON:0005597,1.64e-07,14;UBERON:0000118,1.64e-07,14;UBERON:0003914,2.13e-07,47 | |||
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|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0.0992909512008853,0,0,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,15.8481681015439,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,8.93867407626599,8.51566222243922,5.13930906052708,20.342174953049,13.7355848519681,16.0370913396164,14.9711022287198,7.69925318939494,10.062679505548,0,0,0,12.3484529297255,20.6304076755905,38.1597348285307,0.404632921719196,0,0.633831403506179,6.77689064138264,9.78224275722253,0.899899717281399,1.97773272513395,2.8419204597844,9.28760342607055,9.98967593836042,0,0,0.420649922702764,1.14260393761521,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,1.51452386666368,0.755715601067855,2.89864488701678,6.0229671388697,0,9.17495425784289,5.19821133958135,5.82434953226536,1.54488862144927,12.1005529030421,5.97507810586598,7.77347063922748,0.422530259330042,17.9657068380045,22.9324715735981,14.2213340630666,0,0,0,1.59857431606684,0.776813650941515,0.742210695324124,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.502666365318702,0.988779870937496,4.04878199375753,0,1.29413479957927,0.662524555381181,0.484875253135222,1.86391761218122,0.878342391034642,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,1.12023300235348,0.497627882440372,0,0.420883711772948,1.17108398666433,0.229902104433473,1.62055916824814,0.753524089178575,0.95251098811859,0.896796041993948,1.21812241927647,0.517406741478031,1.72454394346274,1.89106080167819,2.46331573829528,1.53437012699302,2.50242524303038,2.43776516565517,3.2925141825271,0.199034266818493,0,0,0,1.03562886267751,1.17263029990548,1.80062061461015,1.65721314909647,2.16440654922144,1.3884040159864,1.86027155800326,3.21928081679543,1.28441876603886,0.822799249567402,1.31333971263276,2.1888578577381,1.31579988682799,1.09775057645525,1.61047702512446,0.841159794256509,0.308713837137853,0.660837565967596,1.32225283331772,0.853153002140936,0.696710015581316,0.38660238396628,0.403367049246685,1.11189021922435,1.14135375667535,0.474529061544512,0.494096864172033,0,0.596869416123452,1.55971269695296,0,0.216138049874694,0.995706366271836,0.758671603812327,1.25673363870702,2.25415471346161,1.83286195060783,2.71533482034676,1.75339549725796,2.15004226222475,1.91893192373483,0.156998727841375,0.616985819609003,5.63259991465583,0.333690211432188,0.196558995113203,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,2.18426371180192,6.56705082662491,1.61457672169721,5.30687873499704,4.61882975416512,2.27389694124582,2.11854469374634,0.848725428875941,1.87752198630802,2.68010011906905,4.76087281772027,7.02481132288076,4.57141917907954,3.5434350343804,4.30527875375215,3.76885623846197,2.07221978239075,3.47157740595628,0,0,0,0,0.160550589987792,0.468846746368813,3.27869890753351,2.01976741763498,1.26203287766503,0.780877488593277,1.72338718186239,1.43381278771531,1.78238939265915,3.96307143104365,2.42886421004937,2.04579100537918,1.18586333383957,0,0.709700426041343,1.6025904330053,2.76907830901079,1.15479086080775,2.65490276679926,1.21390318077491,1.81394134178851,1.69744571780308,0.885905678642318,0.307435147943927,0,1.45413491791002,0.356497378384721,1.58018378967908,2.10837217149998,2.06271086496374,0,0.18006109403131,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,0.913394847343798,1.17335854031855,1.48282449604674,4.41056796109924,0.32977250588296,2.42196640043858,0.542816324353403,0.477489376012546,0.656563598980245,0.291480836629851,0.18542530201051,0.341741761595705,1.65109494370578,1.29636169158798,0.753473828018764,1.23024804948923,0,0,0,0,1.90934123603023,0.790839983952838,1.21991680276109,0.216010681643603,0.418176592028937,0,0.539457385539283,0.330613822901344,1.30877970992015,0.259229946583586,0,0.56369293868419,0.448549638131936,0.330916980914195,0,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0.629156066554265,0.241584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.616265742988964,0.129920822977795,0,0,0.120195449519969,0.590758108698309,0,0,0,0.38983152295901,0,0,0.906921534460845,0,0.179427713218951,0.503653849092235,4.25017106870819,0.563047426353546,0.549454872801795,0.643105137237198,2.50786052017682,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0,0.453142408984205,0,0.518936737920883,0,1.19513524027894,0.972426868273176,1.25767897576789,1.10306105070008,0.666740183404846,1.03017528619447,0,1.26348605881899,0.76043789967071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| ||
|short_description=p3@Atoh8 | |short_description=p3@Atoh8 | ||
}} | }} |
Latest revision as of 17:11, 1 October 2015
Short description: | p3@Atoh8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atoh8_5end |
Coexpression cluster: | MCL_coexpression_mm9:2449 |
Association with transcript: | 342bp_to_ENSMUST00000042646, NM_153778, uc009cic.1, uc012enh.1_5end |
EntrezGene: | Atoh8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.48e-08 | 8 |
migratory neural crest cell | 7.46e-07 | 10 |
neuron associated cell | 7.46e-07 | 10 |
glial cell (sensu Vertebrata) | 7.46e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.46e-07 | 10 |
glial cell | 7.46e-07 | 10 |
glioblast | 7.46e-07 | 10 |
glioblast (sensu Vertebrata) | 7.46e-07 | 10 |
mesodermal cell | 9.25e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.87e-09 | 23 |
circulatory system | 4.87e-09 | 23 |
trunk | 1.19e-07 | 90 |
splanchnic layer of lateral plate mesoderm | 1.40e-07 | 33 |
lung | 1.64e-07 | 14 |
respiratory tube | 1.64e-07 | 14 |
respiration organ | 1.64e-07 | 14 |
pair of lungs | 1.64e-07 | 14 |
lung primordium | 1.64e-07 | 14 |
lung bud | 1.64e-07 | 14 |
epithelial tube | 2.13e-07 | 47 |