FFCP PHASE1:Mm9::chr14:45839039..45839103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70561 | |EntrezGene=70561 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TN22,D3Z7P6 | |UniProt=Q7TN22,D3Z7P6 | ||
|association_with_transcript=0bp_to_ENSMUST00000022377,ENSMUST00000123118,ENSMUST00000128484,ENSMUST00000139526,ENSMUST00000143609,ENSMUST00000147853,ENSMUST00000150648,ENSMUST00000153383,NM_172597,uc007tgh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022377,ENSMUST00000123118,ENSMUST00000128484,ENSMUST00000139526,ENSMUST00000143609,ENSMUST00000147853,ENSMUST00000150648,ENSMUST00000153383,NM_172597,uc007tgh.1_5end | ||
|cluster_id=chr14:45839039..45839103,- | |||
|description=CAGE_peak_1_at_Txndc16_5end | |description=CAGE_peak_1_at_Txndc16_5end | ||
|id=chr14:45839039..45839103,- | |id=chr14:45839039..45839103,- | ||
|ontology_enrichment_celltype=CL:0000393!4.05e-16!39;CL:0000211!4.05e-16!39;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000055!1.01e-13!50;CL:0000221!7.85e-13!44;CL:0000133!7.85e-13!44;CL:0002319!3.04e-12!43;CL:0000117!9.84e-10!23;CL:0000337!9.84e-10!23 | |ontology_enrichment_celltype=CL:0000393!4.05e-16!39;CL:0000211!4.05e-16!39;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000055!1.01e-13!50;CL:0000221!7.85e-13!44;CL:0000133!7.85e-13!44;CL:0002319!3.04e-12!43;CL:0000117!9.84e-10!23;CL:0000337!9.84e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.98e-16,39;CL:0000211,3.98e-16,39;CL:0000540,2.51e-14,33;CL:0000047,2.51e-14,33;CL:0000031,2.51e-14,33;CL:0000404,2.51e-14,33;CL:0000221,7.76e-13,44;CL:0000133,7.76e-13,44;CL:0002319,3.01e-12,43;CL:0000117,9.75e-10,23;CL:0000337,9.75e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.12e-28!102;UBERON:0000924!4.12e-28!102;UBERON:0006601!4.12e-28!102;UBERON:0000073!4.84e-26!75;UBERON:0001016!4.84e-26!75;UBERON:0001017!1.19e-24!73;UBERON:0005743!1.19e-24!73;UBERON:0002346!3.70e-20!71;UBERON:0003075!3.70e-20!71;UBERON:0007284!3.70e-20!71;UBERON:0000033!1.28e-19!63;UBERON:0001049!5.52e-17!52;UBERON:0005068!5.52e-17!52;UBERON:0006241!5.52e-17!52;UBERON:0007135!5.52e-17!52;UBERON:0000955!1.34e-16!50;UBERON:0006238!1.34e-16!50;UBERON:0002616!6.16e-16!49;UBERON:0003056!1.90e-14!49;UBERON:0002020!5.32e-13!34;UBERON:0003080!1.80e-12!40;UBERON:0002780!7.26e-12!39;UBERON:0001890!7.26e-12!39;UBERON:0006240!7.26e-12!39;UBERON:0007811!5.93e-11!86;UBERON:0002791!7.30e-11!29;UBERON:0003528!7.30e-11!29;UBERON:0001893!7.30e-11!29;UBERON:0000153!9.17e-11!94;UBERON:0004111!3.11e-09!122;UBERON:0000025!4.45e-09!114;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21 | |ontology_enrichment_uberon=UBERON:0004121!4.12e-28!102;UBERON:0000924!4.12e-28!102;UBERON:0006601!4.12e-28!102;UBERON:0000073!4.84e-26!75;UBERON:0001016!4.84e-26!75;UBERON:0001017!1.19e-24!73;UBERON:0005743!1.19e-24!73;UBERON:0002346!3.70e-20!71;UBERON:0003075!3.70e-20!71;UBERON:0007284!3.70e-20!71;UBERON:0000033!1.28e-19!63;UBERON:0001049!5.52e-17!52;UBERON:0005068!5.52e-17!52;UBERON:0006241!5.52e-17!52;UBERON:0007135!5.52e-17!52;UBERON:0000955!1.34e-16!50;UBERON:0006238!1.34e-16!50;UBERON:0002616!6.16e-16!49;UBERON:0003056!1.90e-14!49;UBERON:0002020!5.32e-13!34;UBERON:0003080!1.80e-12!40;UBERON:0002780!7.26e-12!39;UBERON:0001890!7.26e-12!39;UBERON:0006240!7.26e-12!39;UBERON:0007811!5.93e-11!86;UBERON:0002791!7.30e-11!29;UBERON:0003528!7.30e-11!29;UBERON:0001893!7.30e-11!29;UBERON:0000153!9.17e-11!94;UBERON:0004111!3.11e-09!122;UBERON:0000025!4.45e-09!114;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.43e-28,95;UBERON:0000924,5.43e-28,95;UBERON:0006601,5.43e-28,95;UBERON:0001016,4.71e-26,75;UBERON:0001017,1.16e-24,73;UBERON:0010314,4.90e-22,92;UBERON:0010371,2.96e-21,73;UBERON:0002346,2.31e-20,64;UBERON:0003075,2.31e-20,64;UBERON:0007284,2.31e-20,64;UBERON:0000073,3.10e-18,54;UBERON:0001049,5.42e-17,52;UBERON:0005068,5.42e-17,52;UBERON:0006241,5.42e-17,52;UBERON:0007135,5.42e-17,52;UBERON:0000955,9.98e-15,47;UBERON:0006238,9.98e-15,47;UBERON:0003056,1.87e-14,49;UBERON:0002616,4.38e-14,46;UBERON:0002020,5.26e-13,34;UBERON:0003080,1.78e-12,40;UBERON:0002780,7.18e-12,39;UBERON:0001890,7.18e-12,39;UBERON:0006240,7.18e-12,39;UBERON:0003528,7.22e-11,29;UBERON:0002791,7.22e-11,29;UBERON:0001893,7.22e-11,29;UBERON:0004111,3.33e-09,122;UBERON:0000025,4.76e-09,114;UBERON:0000956,1.49e-07,21;UBERON:0001869,1.49e-07,21;UBERON:0000203,1.49e-07,21 | |||
|phase1_expression=22.7411362888807,0.348975407639361,0,0.30246421130683,0,1.6787927191189,2.33612640595526,2.7115897922731,0.422366166455,0.70219357896598,1.02730780935303,0.797721589953364,1.36960583944965,0.961624426608971,3.66420737997229,4.04950534779652,2.79824751251259,25.236973228659,25.0919413498502,29.7072756258621,13.1817099734158,5.36171136484781,3.39559725880616,1.59992422793407,2.75291137280604,0,0,0,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,2.3108129580102,2.32728503501889,2.6542016314108,16.7412652294763,7.0320181007142,15.7057123192139,17.0587131528994,16.3930916390027,13.1087795318411,15.9888958828983,14.4969011643906,11.3798986340243,7.82391344348039,3.92445281484804,2.63623419281366,7.19390626574849,8.25919887589639,7.18762821824858,35.7376950902978,1.45072428402269,3.36093799142464,10.8048963135098,27.2206767941819,15.4701627683233,15.578367486189,16.9277113367051,10.1413024560989,2.71075625655306,0.889294796111139,3.1496490104849,8.89979726310277,4.9733608046227,5.99200221036809,6.14749288514487,14.7239249478038,15.6606888464761,13.6711224878398,17.424710048632,20.5407743085001,14.9438775042244,14.3768206527355,9.19218786610021,33.0347642998166,30.9003358166154,42.241796645467,14.9031505135119,12.8082701043374,14.5855743755893,35.177057874174,30.3891809417107,35.1435969886663,22.3917724959987,19.9320353118744,17.7079473534036,26.3527152799481,58.7191022029724,15.0729534124872,6.0229671388697,0,0.539703191637817,0,0.448026887097336,6.88177658645584,6.64678258054425,4.93593408745451,5.65343319216544,34.2249510057334,3.84979432242953,5.09610479413291,14.2213340630666,0.216491041011214,0,0.505524445014783,5.36664234679582,22.5275958773039,9.94562331734326,4.3371331691534,10.0473607843007,5.30415643688935,12.9621470875255,13.4051126134703,9.67632753238501,2.22475470960936,7.80836527367523,7.96149496754887,6.79420769779119,6.62524555381181,5.33362778448744,1.86391761218122,28.6925181071316,29.1130922470703,2.55457055208591,6.70964697233154,6.59893004092748,8.13249453267614,35.500381538943,28.3650373747548,14.7015591972051,23.4662832259573,30.6858548796397,30.5448425502553,36.17980166411,8.04530974417499,12.6895110022295,19.2069296409593,9.25944165900485,9.75903322220278,9.65588838620586,9.72335500948886,10.7000420663358,16.6689422920753,18.1921482804487,16.585205247072,20.4375662883822,4.095791865724,6.80781888604149,9.85326295318113,7.01426343768239,7.50727572909114,4.52727816478817,9.67176041117334,6.56813080501028,2.1066395619397,3.08817488537658,3.40996199274711,6.21377317606506,9.85009451920604,7.38254451990161,7.81257627431194,8.46086196513836,6.17068451549513,6.97601834251224,4.82892122519315,11.0927075248811,5.9241545968853,9.85004784474571,11.3496333364198,10.9649990568999,10.0993053033883,12.0785776884335,25.0245038791311,21.1983501501326,0.660837565967596,1.85115396664481,6.82522401712749,6.50262681209228,3.22168653305233,2.8235693447268,5.33707305227689,6.84812254005213,2.37264530772256,4.28217282282428,6.28338022000674,5.37182474511107,4.48417400373976,4.49409704327111,3.02593269824572,4.38110801159608,2.84501851429623,5.36968009265725,5.63538678365402,6.51684249105006,3.10323979468201,8.34616256694791,10.3075555512539,6.05201606716369,7.84993639206874,6.41665252393363,2.96452627087149,0.667380422864376,1.17935397067922,1.12431056192427,0.811440485554012,2.894125917029,2.29163266603278,2.5892652370573,2.7562988551756,2.74561413188081,5.75072826109418,3.72140947668503,4.05648975048929,1.76805214562978,3.94674309748207,2.8946611281802,11.0851914099963,3.7898282354097,6.68156403412306,6.11082308790677,7.51008794523207,8.04030035720716,11.9021820443007,7.80534591431195,9.93101407869003,13.0664166892777,12.756381492599,11.9620219742489,12.2606337124786,12.5844680965915,7.53956419696361,6.52686820582452,8.85175691434265,14.3487108078461,43.188108706716,50.5182369212396,7.21313759657372,16.1581393410799,14.1978698737316,14.8366722832723,25.6353843302031,28.6762557543062,31.4146130456176,37.0830255333371,16.1924280669958,19.2888866221466,21.7408277870588,37.5945940213514,8.09058485687131,8.01295216502649,8.79589580509311,14.1874305756381,1.32745138339963,4.61283208694465,2.41858845571801,3.20628635585027,1.77181135728464,3.68922177532713,5.42699415653264,3.63533729477506,5.70395805415554,3.47640433729398,2.10837217149998,5.15677716240934,20.0859367394735,9.18311579559682,4.78627129996192,5.5727629108214,9.93105308396732,11.0588666913284,11.8475294833527,10.656273219011,3.05073220482823,5.08396970073168,3.30792597082443,7.91454014119104,10.172258881842,8.32318364008551,7.40108532819446,4.76008609260678,2.91480836629851,47.4688773146905,6.66396435111626,6.3979929068599,5.92622487583077,4.1441060541032,4.64760374251486,9.37990510146743,9.5187920796559,7.13752406850656,6.49539876880792,3.81868247206045,4.27053591334533,4.26970880966382,4.75223499615926,5.22720740036172,5.02233896616208,3.9110660451598,6.11635572367486,7.59092231753686,3.49960427887841,7.45607175704311,8.45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| |phase1_expression=22.7411362888807,0.348975407639361,0,0.30246421130683,0,1.6787927191189,2.33612640595526,2.7115897922731,0.422366166455,0.70219357896598,1.02730780935303,0.797721589953364,1.36960583944965,0.961624426608971,3.66420737997229,4.04950534779652,2.79824751251259,25.236973228659,25.0919413498502,29.7072756258621,13.1817099734158,5.36171136484781,3.39559725880616,1.59992422793407,2.75291137280604,0,0,0,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,2.3108129580102,2.32728503501889,2.6542016314108,16.7412652294763,7.0320181007142,15.7057123192139,17.0587131528994,16.3930916390027,13.1087795318411,15.9888958828983,14.4969011643906,11.3798986340243,7.82391344348039,3.92445281484804,2.63623419281366,7.19390626574849,8.25919887589639,7.18762821824858,35.7376950902978,1.45072428402269,3.36093799142464,10.8048963135098,27.2206767941819,15.4701627683233,15.578367486189,16.9277113367051,10.1413024560989,2.71075625655306,0.889294796111139,3.1496490104849,8.89979726310277,4.9733608046227,5.99200221036809,6.14749288514487,14.7239249478038,15.6606888464761,13.6711224878398,17.424710048632,20.5407743085001,14.9438775042244,14.3768206527355,9.19218786610021,33.0347642998166,30.9003358166154,42.241796645467,14.9031505135119,12.8082701043374,14.5855743755893,35.177057874174,30.3891809417107,35.1435969886663,22.3917724959987,19.9320353118744,17.7079473534036,26.3527152799481,58.7191022029724,15.0729534124872,6.0229671388697,0,0.539703191637817,0,0.448026887097336,6.88177658645584,6.64678258054425,4.93593408745451,5.65343319216544,34.2249510057334,3.84979432242953,5.09610479413291,14.2213340630666,0.216491041011214,0,0.505524445014783,5.36664234679582,22.5275958773039,9.94562331734326,4.3371331691534,10.0473607843007,5.30415643688935,12.9621470875255,13.4051126134703,9.67632753238501,2.22475470960936,7.80836527367523,7.96149496754887,6.79420769779119,6.62524555381181,5.33362778448744,1.86391761218122,28.6925181071316,29.1130922470703,2.55457055208591,6.70964697233154,6.59893004092748,8.13249453267614,35.500381538943,28.3650373747548,14.7015591972051,23.4662832259573,30.6858548796397,30.5448425502553,36.17980166411,8.04530974417499,12.6895110022295,19.2069296409593,9.25944165900485,9.75903322220278,9.65588838620586,9.72335500948886,10.7000420663358,16.6689422920753,18.1921482804487,16.585205247072,20.4375662883822,4.095791865724,6.80781888604149,9.85326295318113,7.01426343768239,7.50727572909114,4.52727816478817,9.67176041117334,6.56813080501028,2.1066395619397,3.08817488537658,3.40996199274711,6.21377317606506,9.85009451920604,7.38254451990161,7.81257627431194,8.46086196513836,6.17068451549513,6.97601834251224,4.82892122519315,11.0927075248811,5.9241545968853,9.85004784474571,11.3496333364198,10.9649990568999,10.0993053033883,12.0785776884335,25.0245038791311,21.1983501501326,0.660837565967596,1.85115396664481,6.82522401712749,6.50262681209228,3.22168653305233,2.8235693447268,5.33707305227689,6.84812254005213,2.37264530772256,4.28217282282428,6.28338022000674,5.37182474511107,4.48417400373976,4.49409704327111,3.02593269824572,4.38110801159608,2.84501851429623,5.36968009265725,5.63538678365402,6.51684249105006,3.10323979468201,8.34616256694791,10.3075555512539,6.05201606716369,7.84993639206874,6.41665252393363,2.96452627087149,0.667380422864376,1.17935397067922,1.12431056192427,0.811440485554012,2.894125917029,2.29163266603278,2.5892652370573,2.7562988551756,2.74561413188081,5.75072826109418,3.72140947668503,4.05648975048929,1.76805214562978,3.94674309748207,2.8946611281802,11.0851914099963,3.7898282354097,6.68156403412306,6.11082308790677,7.51008794523207,8.04030035720716,11.9021820443007,7.80534591431195,9.93101407869003,13.0664166892777,12.756381492599,11.9620219742489,12.2606337124786,12.5844680965915,7.53956419696361,6.52686820582452,8.85175691434265,14.3487108078461,43.188108706716,50.5182369212396,7.21313759657372,16.1581393410799,14.1978698737316,14.8366722832723,25.6353843302031,28.6762557543062,31.4146130456176,37.0830255333371,16.1924280669958,19.2888866221466,21.7408277870588,37.5945940213514,8.09058485687131,8.01295216502649,8.79589580509311,14.1874305756381,1.32745138339963,4.61283208694465,2.41858845571801,3.20628635585027,1.77181135728464,3.68922177532713,5.42699415653264,3.63533729477506,5.70395805415554,3.47640433729398,2.10837217149998,5.15677716240934,20.0859367394735,9.18311579559682,4.78627129996192,5.5727629108214,9.93105308396732,11.0588666913284,11.8475294833527,10.656273219011,3.05073220482823,5.08396970073168,3.30792597082443,7.91454014119104,10.172258881842,8.32318364008551,7.40108532819446,4.76008609260678,2.91480836629851,47.4688773146905,6.66396435111626,6.3979929068599,5.92622487583077,4.1441060541032,4.64760374251486,9.37990510146743,9.5187920796559,7.13752406850656,6.49539876880792,3.81868247206045,4.27053591334533,4.26970880966382,4.75223499615926,5.22720740036172,5.02233896616208,3.9110660451598,6.11635572367486,7.59092231753686,3.49960427887841,7.45607175704311,8.45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| ||
|short_description=p1@Txndc16 | |short_description=p1@Txndc16 | ||
}} | }} |
Latest revision as of 23:27, 25 September 2015
Short description: | p1@Txndc16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Txndc16_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000022377, ENSMUST00000123118, ENSMUST00000128484, ENSMUST00000139526, ENSMUST00000143609, ENSMUST00000147853, ENSMUST00000150648, ENSMUST00000153383, NM_172597, uc007tgh.1_5end |
EntrezGene: | Txndc16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.98e-16 | 39 |
electrically active cell | 3.98e-16 | 39 |
neuron | 2.51e-14 | 33 |
neuronal stem cell | 2.51e-14 | 33 |
neuroblast | 2.51e-14 | 33 |
electrically signaling cell | 2.51e-14 | 33 |
ectodermal cell | 7.76e-13 | 44 |
neurectodermal cell | 7.76e-13 | 44 |
neural cell | 3.01e-12 | 43 |
CNS neuron (sensu Vertebrata) | 9.75e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.75e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.43e-28 | 95 |
ectoderm | 5.43e-28 | 95 |
presumptive ectoderm | 5.43e-28 | 95 |
nervous system | 4.71e-26 | 75 |
central nervous system | 1.16e-24 | 73 |
structure with developmental contribution from neural crest | 4.90e-22 | 92 |
ecto-epithelium | 2.96e-21 | 73 |
neurectoderm | 2.31e-20 | 64 |
neural plate | 2.31e-20 | 64 |
presumptive neural plate | 2.31e-20 | 64 |
regional part of nervous system | 3.10e-18 | 54 |
neural tube | 5.42e-17 | 52 |
neural rod | 5.42e-17 | 52 |
future spinal cord | 5.42e-17 | 52 |
neural keel | 5.42e-17 | 52 |
brain | 9.98e-15 | 47 |
future brain | 9.98e-15 | 47 |
pre-chordal neural plate | 1.87e-14 | 49 |
regional part of brain | 4.38e-14 | 46 |
gray matter | 5.26e-13 | 34 |
anterior neural tube | 1.78e-12 | 40 |
regional part of forebrain | 7.18e-12 | 39 |
forebrain | 7.18e-12 | 39 |
future forebrain | 7.18e-12 | 39 |
brain grey matter | 7.22e-11 | 29 |
regional part of telencephalon | 7.22e-11 | 29 |
telencephalon | 7.22e-11 | 29 |
anatomical conduit | 3.33e-09 | 122 |
tube | 4.76e-09 | 114 |
cerebral cortex | 1.49e-07 | 21 |
cerebral hemisphere | 1.49e-07 | 21 |
pallium | 1.49e-07 | 21 |