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{{CL
{{CL
|id=CL:0002006
|alt_id=
|name=Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell
|namespace=cell
|def="A megakaryocyte erythroid progenitor cell that is Kit-positive and is Sca1-negative, CD34-negative, CD90-negative, IL7r-alpha-negative and Fcgr II/III-low." [GOC:tfm, http://www.immgen.org/index_content.html, PMID:12615892, PMID:19022770]
|xref=
|is_a=CL:0000050
|synonym=
|comment=Markers are associated with mouse cells.
|comment=Markers are associated with mouse cells.
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-01-13T03:43:12Z
|def="A megakaryocyte erythroid progenitor cell that is Kit-positive and is Sca1-negative, CD34-negative, CD90-negative, IL7r-alpha-negative and Fcgr II/III-low." [GOC:tfm, http://www.immgen.org/index_content.html, PMID:12615892, PMID:19022770]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002006
|is_a=CL:0000050
|is_obsolete=
|located_in=
|located_in=
|name=Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell
|namespace=FANTOM
|obo_creation_date=2010-01-13T03:43:12Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:39, 12 September 2014

Name:Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell
Namespace:FANTOM
Definition:"A megakaryocyte erythroid progenitor cell that is Kit-positive and is Sca1-negative, CD34-negative, CD90-negative, IL7r-alpha-negative and Fcgr II/III-low." [GOC:tfm, http://www.immgen.org/index_content.html, PMID:12615892, PMID:19022770]
Comments:Markers are associated with mouse cells.
Created by:tmeehan
Creation date:2010-01-13T03:43:12Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000050(megakaryocyte-erythroid progenitor cell)



Children


develops from:CL:0002024 (Kit-positive megakaryocyte progenitor cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002006 (Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr11:102210718..102210728,-#_ec800825ccd4dca1602377124c262bdep@chr11:102210718..102210728, -
1.58e-86FFCP PHASE2:Mm9::chr11:102210718..102210728,-#_ec800825ccd4dca1602377124c262bdep@chr11:102210718..102210728, -
1.33e-65FFCP PHASE2:Mm9::chr10:40941203..40941208,-#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr10:40941203..40941208, -
1.33e-65FFCP PHASE1:Mm9::chr8:123049251..123049271,+#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr8:123049251..123049271, +
1.33e-65FFCP PHASE2:Mm9::chr8:123049251..123049271,+#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr8:123049251..123049271, +
1.33e-65FFCP PHASE2:Mm9::chr18:71090441..71090442,+#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr18:71090441..71090442, +
1.33e-65FFCP PHASE1:Mm9::chr18:71090441..71090442,+#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr18:71090441..71090442, +
1.33e-65FFCP PHASE1:Mm9::chr10:40941203..40941208,-#_42cc2dbc2b82ca8da0c81f9654bfddeep@chr10:40941203..40941208, -
6.04e-65FFCP PHASE2:Mm9::chr18:68558585..68558589,+#_0d2f1305c6e6e012444bfb096ddd245ep@chr18:68558585..68558589, +
6.04e-65FFCP PHASE1:Mm9::chr18:68558585..68558589,+#_0d2f1305c6e6e012444bfb096ddd245ep@chr18:68558585..68558589, +
3.28e-58FFCP PHASE2:Mm9::chr10:36360889..36360893,+#_d331f2746f88ee3708c51ae573eb40ddp@chr10:36360889..36360893, +
3.28e-58FFCP PHASE2:Mm9::chr2:114025951..114025954,+#_d331f2746f88ee3708c51ae573eb40ddp@chr2:114025951..114025954, +
3.28e-58FFCP PHASE1:Mm9::chr13:94937146..94937147,+#_d331f2746f88ee3708c51ae573eb40ddp@chr13:94937146..94937147, +
3.28e-58FFCP PHASE1:Mm9::chr18:37563707..37563712,+#_d331f2746f88ee3708c51ae573eb40ddp@chr18:37563707..37563712, +
3.28e-58FFCP PHASE1:Mm9::chr1:136173181..136173183,+#_d331f2746f88ee3708c51ae573eb40ddp@chr1:136173181..136173183, +
3.28e-58FFCP PHASE1:Mm9::chr1:63149723..63149724,+#_d331f2746f88ee3708c51ae573eb40ddp@chr1:63149723..63149724, +
3.28e-58FFCP PHASE1:Mm9::chr15:15029103..15029107,+#_d331f2746f88ee3708c51ae573eb40ddp@chr15:15029103..15029107, +
3.28e-58FFCP PHASE2:Mm9::chr18:37563707..37563712,+#_d331f2746f88ee3708c51ae573eb40ddp@chr18:37563707..37563712, +
3.28e-58FFCP PHASE1:Mm9::chr18:87173747..87173751,+#_d331f2746f88ee3708c51ae573eb40ddp@chr18:87173747..87173751, +
3.28e-58FFCP PHASE1:Mm9::chr10:36360889..36360893,+#_d331f2746f88ee3708c51ae573eb40ddp@chr10:36360889..36360893, +
3.28e-58FFCP PHASE1:Mm9::chr11:32196491..32196492,+#_d331f2746f88ee3708c51ae573eb40ddp1@Hba-a2
3.28e-58FFCP PHASE2:Mm9::chr11:32196491..32196492,+#_d331f2746f88ee3708c51ae573eb40ddp1@Hba-a2
3.28e-58FFCP PHASE2:Mm9::chr3:7133293..7133296,+#_d331f2746f88ee3708c51ae573eb40ddp@chr3:7133293..7133296, +
3.28e-58FFCP PHASE2:Mm9::chr8:23515716..23515717,+#_d331f2746f88ee3708c51ae573eb40ddp@chr8:23515716..23515717, +
3.28e-58FFCP PHASE2:Mm9::chr15:15029103..15029107,+#_d331f2746f88ee3708c51ae573eb40ddp@chr15:15029103..15029107, +
3.28e-58FFCP PHASE2:Mm9::chr2:95321604..95321605,+#_d331f2746f88ee3708c51ae573eb40ddp@chr2:95321604..95321605, +
3.28e-58FFCP PHASE2:Mm9::chr4:5713820..5713822,+#_d331f2746f88ee3708c51ae573eb40ddp@chr4:5713820..5713822, +
3.28e-58FFCP PHASE2:Mm9::chr1:136173181..136173183,+#_d331f2746f88ee3708c51ae573eb40ddp@chr1:136173181..136173183, +
3.28e-58FFCP PHASE2:Mm9::chr1:63149723..63149724,+#_d331f2746f88ee3708c51ae573eb40ddp@chr1:63149723..63149724, +
3.28e-58FFCP PHASE1:Mm9::chr2:95321604..95321605,+#_d331f2746f88ee3708c51ae573eb40ddp@chr2:95321604..95321605, +
3.28e-58FFCP PHASE2:Mm9::chr13:94937146..94937147,+#_d331f2746f88ee3708c51ae573eb40ddp@chr13:94937146..94937147, +
3.28e-58FFCP PHASE1:Mm9::chr12:75309346..75309347,+#_d331f2746f88ee3708c51ae573eb40ddp@chr12:75309346..75309347, +
3.28e-58FFCP PHASE1:Mm9::chrX:136488391..136488392,+#_d331f2746f88ee3708c51ae573eb40ddp@chrX:136488391..136488392, +
3.28e-58FFCP PHASE1:Mm9::chr8:23515716..23515717,+#_d331f2746f88ee3708c51ae573eb40ddp@chr8:23515716..23515717, +
3.28e-58FFCP PHASE1:Mm9::chr4:5713820..5713822,+#_d331f2746f88ee3708c51ae573eb40ddp@chr4:5713820..5713822, +
3.28e-58FFCP PHASE1:Mm9::chr3:7133293..7133296,+#_d331f2746f88ee3708c51ae573eb40ddp@chr3:7133293..7133296, +
3.28e-58FFCP PHASE2:Mm9::chrX:136488391..136488392,+#_d331f2746f88ee3708c51ae573eb40ddp@chrX:136488391..136488392, +
3.28e-58FFCP PHASE1:Mm9::chr2:114025951..114025954,+#_d331f2746f88ee3708c51ae573eb40ddp@chr2:114025951..114025954, +
3.28e-58FFCP PHASE2:Mm9::chr18:87173747..87173751,+#_d331f2746f88ee3708c51ae573eb40ddp@chr18:87173747..87173751, +
3.28e-58FFCP PHASE2:Mm9::chr12:75309346..75309347,+#_d331f2746f88ee3708c51ae573eb40ddp@chr12:75309346..75309347, +
4.9e-53FFCP PHASE2:Mm9::chr11:5474110..5474118,+#_e160b5036cf2a006c0052d478bb0bf22p4@Ankrd36
4.9e-53FFCP PHASE1:Mm9::chr11:5474110..5474118,+#_e160b5036cf2a006c0052d478bb0bf22p4@Ankrd36
7.35e-53FFCP PHASE1:Mm9::chr15:24185318..24185321,+#_630eff7421bde8a7f3565d9b1d7a019ap@chr15:24185318..24185321, +
7.35e-53FFCP PHASE2:Mm9::chr15:24185318..24185321,+#_630eff7421bde8a7f3565d9b1d7a019ap@chr15:24185318..24185321, +
3.27e-44FFCP PHASE1:Mm9::chr9:3034197..3034209,+#_48e9c1eccf074e1a215aa6b22803ba84p1@ENSMUST00000170073
3.27e-44FFCP PHASE2:Mm9::chr9:3034197..3034209,+#_48e9c1eccf074e1a215aa6b22803ba84p1@ENSMUST00000170073
6.41e-44FFCP PHASE2:Mm9::chr7:116746256..116746261,-#_1308a1010b15a7dcdbfa70aa4a9a69cfp@chr7:116746256..116746261, -
6.41e-44FFCP PHASE1:Mm9::chr7:116746256..116746261,-#_1308a1010b15a7dcdbfa70aa4a9a69cfp@chr7:116746256..116746261, -
8.97e-44FFCP PHASE1:Mm9::chr3:153515447..153515449,-#_b9a2cbaa4690f00c1347e587c09b9d35p3@2510003D18Rik
8.97e-44FFCP PHASE2:Mm9::chr3:153515447..153515449,-#_b9a2cbaa4690f00c1347e587c09b9d35p3@2510003D18Rik
1.7e-39FFCP PHASE2:Mm9::chr18:10715046..10715048,+#_624c168016777655da900bc7795d3929p@chr18:10715046..10715048, +
1.7e-39FFCP PHASE2:Mm9::chr17:84975629..84975633,+#_624c168016777655da900bc7795d3929p@chr17:84975629..84975633, +
1.7e-39FFCP PHASE1:Mm9::chr17:84975629..84975633,+#_624c168016777655da900bc7795d3929p@chr17:84975629..84975633, +
1.7e-39FFCP PHASE2:Mm9::chr18:55201820..55201826,+#_624c168016777655da900bc7795d3929p@chr18:55201820..55201826, +
1.7e-39FFCP PHASE2:Mm9::chr14:39440035..39440038,+#_624c168016777655da900bc7795d3929p@chr14:39440035..39440038, +
1.7e-39FFCP PHASE1:Mm9::chr18:55201820..55201826,+#_624c168016777655da900bc7795d3929p@chr18:55201820..55201826, +
1.7e-39FFCP PHASE1:Mm9::chr14:39440035..39440038,+#_624c168016777655da900bc7795d3929p@chr14:39440035..39440038, +
1.7e-39FFCP PHASE1:Mm9::chr13:89417961..89417962,-#_624c168016777655da900bc7795d3929p@chr13:89417961..89417962, -
1.7e-39FFCP PHASE1:Mm9::chr18:10715046..10715048,+#_624c168016777655da900bc7795d3929p@chr18:10715046..10715048, +
1.7e-39FFCP PHASE2:Mm9::chr13:89417961..89417962,-#_624c168016777655da900bc7795d3929p@chr13:89417961..89417962, -
4.15e-39FFCP PHASE1:Mm9::chr15:77338698..77338700,+#_62409a711589170c991b4573ca8a2739p1@Apol11a
4.15e-39FFCP PHASE2:Mm9::chr15:77338698..77338700,+#_62409a711589170c991b4573ca8a2739p1@Apol11a
1.56e-38FFCP PHASE1:Mm9::chr11:5474159..5474170,+#_058ad1e703a03de177a8190fac3c0445p2@Ankrd36
1.56e-38FFCP PHASE2:Mm9::chr11:5474159..5474170,+#_058ad1e703a03de177a8190fac3c0445p2@Ankrd36
2.09e-38FFCP PHASE1:Mm9::chr17:39985363..39985372,+#_c306171aa53a5cc4ada28aac6b4ad5a7p@chr17:39985363..39985372, +
2.09e-38FFCP PHASE2:Mm9::chr17:39985363..39985372,+#_c306171aa53a5cc4ada28aac6b4ad5a7p@chr17:39985363..39985372, +
2.79e-38FFCP PHASE1:Mm9::chr5:133715438..133715442,+#_06b18bd37e6e7aa349acf1ea5313e307p@chr5:133715438..133715442, +
2.79e-38FFCP PHASE2:Mm9::chr5:133715438..133715442,+#_06b18bd37e6e7aa349acf1ea5313e307p@chr5:133715438..133715442, +
4.98e-38FFCP PHASE1:Mm9::chr12:114568638..114568651,-#_60c5144ed6edd6000c93458496fbbf3cp@chr12:114568638..114568651, -
4.98e-38FFCP PHASE2:Mm9::chr12:114568638..114568651,-#_60c5144ed6edd6000c93458496fbbf3cp@chr12:114568638..114568651, -
2.1e-37FFCP PHASE1:Mm9::chr12:114567912..114567927,-#_2e288b3e1134082dfccab290679416cfp@chr12:114567912..114567927, -
2.1e-37FFCP PHASE2:Mm9::chr12:114567912..114567927,-#_2e288b3e1134082dfccab290679416cfp@chr12:114567912..114567927, -
2.8e-37FFCP PHASE2:Mm9::chr4:59686875..59686885,+#_f1cee1bd4eb495034316e322e7560b9ep@chr4:59686875..59686885, +
2.8e-37FFCP PHASE1:Mm9::chr4:59686875..59686885,+#_f1cee1bd4eb495034316e322e7560b9ep@chr4:59686875..59686885, +
3.67e-34FFCP PHASE2:Mm9::chr10:40941126..40941138,-#_e1bcce8d0e0a6390a65d68cb73c2d237p@chr10:40941126..40941138, -
3.67e-34FFCP PHASE1:Mm9::chr10:40941126..40941138,-#_e1bcce8d0e0a6390a65d68cb73c2d237p@chr10:40941126..40941138, -
6.12e-34FFCP PHASE2:Mm9::chr18:80476177..80476182,+#_3af7a9d0839be8831d9713a4d6b84822p@chr18:80476177..80476182, +
6.12e-34FFCP PHASE1:Mm9::chr6:17693582..17693593,+#_3af7a9d0839be8831d9713a4d6b84822p19@St7
6.12e-34FFCP PHASE2:Mm9::chr6:17693582..17693593,+#_3af7a9d0839be8831d9713a4d6b84822p19@St7
6.12e-34FFCP PHASE1:Mm9::chr18:80476177..80476182,+#_3af7a9d0839be8831d9713a4d6b84822p@chr18:80476177..80476182, +
1.69e-33FFCP PHASE1:Mm9::chr9:106302034..106302036,-#_f6477c2d1257a6fea98a89554b26eb8dp@chr9:106302034..106302036, -
1.69e-33FFCP PHASE2:Mm9::chr9:106302034..106302036,-#_f6477c2d1257a6fea98a89554b26eb8dp@chr9:106302034..106302036, -
1.16e-30FFCP PHASE2:Mm9::chr19:4127266..4127286,-#_07a49d0f854128114759d6f0ec10741ap@chr19:4127266..4127286, -
1.16e-30FFCP PHASE1:Mm9::chr19:4127266..4127286,-#_07a49d0f854128114759d6f0ec10741ap@chr19:4127266..4127286, -
1.83e-30FFCP PHASE1:Mm9::chr11:3001954..3001964,+#_88e6aa051ca24195cc79813879d61bd1p@chr11:3001954..3001964, +
1.83e-30FFCP PHASE1:Mm9::chr10:50076400..50076404,+#_88e6aa051ca24195cc79813879d61bd1p@chr10:50076400..50076404, +
1.83e-30FFCP PHASE2:Mm9::chr11:3001954..3001964,+#_88e6aa051ca24195cc79813879d61bd1p@chr11:3001954..3001964, +
1.83e-30FFCP PHASE2:Mm9::chr10:50076400..50076404,+#_88e6aa051ca24195cc79813879d61bd1p@chr10:50076400..50076404, +
2.3e-30FFCP PHASE1:Mm9::chr2:98503916..98503926,+#_b050231baf81817108b31ebe52d38257p@chr2:98503916..98503926, +
2.3e-30FFCP PHASE2:Mm9::chr2:98503916..98503926,+#_b050231baf81817108b31ebe52d38257p@chr2:98503916..98503926, +
2.89e-30FFCP PHASE2:Mm9::chr3:41343162..41343165,+#_2917bff50de409f58961bff249667c8cp@chr3:41343162..41343165, +
2.89e-30FFCP PHASE1:Mm9::chr3:41343162..41343165,+#_2917bff50de409f58961bff249667c8cp@chr3:41343162..41343165, +
3.62e-30FFCP PHASE2:Mm9::chr5:62179269..62179272,+#_565176b2b4ec3343eb81b8d518745444p@chr5:62179269..62179272, +
3.62e-30FFCP PHASE1:Mm9::chr5:62179269..62179272,+#_565176b2b4ec3343eb81b8d518745444p@chr5:62179269..62179272, +
4.03e-30FFCP PHASE1:Mm9::chr2:72923513..72923516,+#_892bae7b14ba152fe89dceb4457047a5p@chr2:72923513..72923516, +
4.03e-30FFCP PHASE2:Mm9::chr12:33892535..33892536,+#_892bae7b14ba152fe89dceb4457047a5p@chr12:33892535..33892536, +
4.03e-30FFCP PHASE1:Mm9::chr7:78374198..78374200,+#_892bae7b14ba152fe89dceb4457047a5p@chr7:78374198..78374200, +
4.03e-30FFCP PHASE1:Mm9::chr9:108276696..108276698,+#_892bae7b14ba152fe89dceb4457047a5p@chr9:108276696..108276698, +
4.03e-30FFCP PHASE2:Mm9::chr9:108276696..108276698,+#_892bae7b14ba152fe89dceb4457047a5p@chr9:108276696..108276698, +
4.03e-30FFCP PHASE2:Mm9::chr2:98503870..98503876,+#_892bae7b14ba152fe89dceb4457047a5p@chr2:98503870..98503876, +

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