FFCP PHASE1:Mm9::chr4:118862610..118862621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27028 | |EntrezGene=27028 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=A2A7P7,A2A7P6,Q9JLN5 | |UniProt=A2A7P7,A2A7P6,Q9JLN5 | ||
|association_with_transcript=0bp_to_ENSMUST00000138395,ENSMUST00000156746,NM_013848,uc008ulh.2,uc008uli.2,uc008ulj.2,uc012dke.1_5end | |association_with_transcript=0bp_to_ENSMUST00000138395,ENSMUST00000156746,NM_013848,uc008ulh.2,uc008uli.2,uc008ulj.2,uc012dke.1_5end | ||
|cluster_id=chr4:118862610..118862621,- | |||
|description=CAGE_peak_4_at_Ermap_5end | |description=CAGE_peak_4_at_Ermap_5end | ||
|id=chr4:118862610..118862621,- | |id=chr4:118862610..118862621,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.02e-08,3;CL:0002006,1.02e-08,3;CL:0002024,1.02e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.26e-07!6;UBERON:0004457!1.26e-07!6;UBERON:0000042!1.26e-07!6;UBERON:0004854!1.26e-07!6;UBERON:0009034!1.26e-07!6;UBERON:0002095!1.26e-07!6;UBERON:0004782!1.26e-07!6;UBERON:0003281!1.26e-07!6;UBERON:0009664!1.26e-07!6;UBERON:0002296!1.26e-07!6;UBERON:0005602!1.26e-07!6;UBERON:0001179!1.26e-07!6;UBERON:0006293!1.26e-07!6;UBERON:0005172!3.51e-07!49;UBERON:0005173!3.51e-07!49;UBERON:0002417!3.51e-07!49;UBERON:0000916!3.51e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.28e-14,6;UBERON:0004457,1.28e-14,6;UBERON:0000042,1.28e-14,6;UBERON:0004854,1.28e-14,6;UBERON:0009034,1.28e-14,6;UBERON:0002095,1.28e-14,6;UBERON:0004782,1.28e-14,6;UBERON:0003281,1.28e-14,6;UBERON:0009664,1.28e-14,6;UBERON:0002296,1.28e-14,6;UBERON:0005602,1.28e-14,6;UBERON:0001179,1.28e-14,6;UBERON:0006293,1.28e-14,6;UBERON:0005172,6.60e-12,49;UBERON:0005173,6.60e-12,49;UBERON:0002417,6.60e-12,49;UBERON:0000916,6.60e-12,49;UBERON:0003887,2.33e-11,10;UBERON:0002107,4.96e-11,22;UBERON:0007499,4.96e-11,22;UBERON:0006925,4.96e-11,22;UBERON:0009497,4.96e-11,22;UBERON:0000015,4.96e-11,22;UBERON:0002423,4.96e-11,22;UBERON:0006235,4.96e-11,22;UBERON:0008835,4.96e-11,22;UBERON:0003894,4.96e-11,22;UBERON:0004161,4.96e-11,22;UBERON:0008836,4.96e-11,22;UBERON:0009854,1.90e-10,23;UBERON:0009856,1.90e-10,23;UBERON:0002365,2.01e-09,25;UBERON:0002330,2.01e-09,25;UBERON:0009569,9.61e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6588416635482,16.6029719259657,32.8794082720229,0.157731082679119,0,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,2.54012269383853,1.23012957516914,0,0,0,0,1.25559489221072,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,6.19227386364912,0.970601099684455,9.27534377533653,8.727754556434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71797641294502,0,0,0.260240885925407,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,1.64168241986767,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,5.33904338291501,6.2898878436225,10.1187950573184,11.1573066763677,13.7470981058878,9.93040821947537,5.17853047411459,7.62035565842666,1.92192989231657,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7396402054776,1.44470807574256,4.62986318424279,23.3576886685817,12.9859516334974,15.0993594316305,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,0.183843508450014,1.11123363900808,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,1.09127391015665,0.476293691283074,0.695305955669133,0.964546102318525,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.761531471025089,0.914639864363863,0,1.22223702461276,1.12228454331548,0.593175090620871,0.788035859004508,0.409231043169689,0.77468420592983,0.385813221962283,0,1.16965804222704,1.07435527024149,0.382576664137687,1.54413993383661,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6588416635482,16.6029719259657,32.8794082720229,0.157731082679119,0,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,2.54012269383853,1.23012957516914,0,0,0,0,1.25559489221072,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,6.19227386364912,0.970601099684455,9.27534377533653,8.727754556434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71797641294502,0,0,0.260240885925407,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,1.64168241986767,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,5.33904338291501,6.2898878436225,10.1187950573184,11.1573066763677,13.7470981058878,9.93040821947537,5.17853047411459,7.62035565842666,1.92192989231657,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7396402054776,1.44470807574256,4.62986318424279,23.3576886685817,12.9859516334974,15.0993594316305,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,0.183843508450014,1.11123363900808,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,1.09127391015665,0.476293691283074,0.695305955669133,0.964546102318525,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.761531471025089,0.914639864363863,0,1.22223702461276,1.12228454331548,0.593175090620871,0.788035859004508,0.409231043169689,0.77468420592983,0.385813221962283,0,1.16965804222704,1.07435527024149,0.382576664137687,1.54413993383661,1.39120701372253 | ||
|short_description=p4@Ermap | |short_description=p4@Ermap | ||
}} | }} |
Latest revision as of 06:19, 26 September 2015
Short description: | p4@Ermap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ermap_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000138395, ENSMUST00000156746, NM_013848, uc008ulh.2, uc008uli.2, uc008ulj.2, uc012dke.1_5end |
EntrezGene: | Ermap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.02e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.02e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.02e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.28e-14 | 6 |
cavity lining | 1.28e-14 | 6 |
serous membrane | 1.28e-14 | 6 |
gastrointestinal system mesentery | 1.28e-14 | 6 |
stomach region | 1.28e-14 | 6 |
mesentery | 1.28e-14 | 6 |
gastrointestinal system serosa | 1.28e-14 | 6 |
mesentery of stomach | 1.28e-14 | 6 |
gut mesentery | 1.28e-14 | 6 |
dorsal mesentery | 1.28e-14 | 6 |
dorsal mesogastrium | 1.28e-14 | 6 |
peritoneal cavity | 1.28e-14 | 6 |
spleen primordium | 1.28e-14 | 6 |
abdomen element | 6.60e-12 | 49 |
abdominal segment element | 6.60e-12 | 49 |
abdominal segment of trunk | 6.60e-12 | 49 |
abdomen | 6.60e-12 | 49 |
intraembryonic coelom | 2.33e-11 | 10 |
liver | 4.96e-11 | 22 |
epithelial sac | 4.96e-11 | 22 |
digestive gland | 4.96e-11 | 22 |
epithelium of foregut-midgut junction | 4.96e-11 | 22 |
anatomical boundary | 4.96e-11 | 22 |
hepatobiliary system | 4.96e-11 | 22 |
foregut-midgut junction | 4.96e-11 | 22 |
hepatic diverticulum | 4.96e-11 | 22 |
liver primordium | 4.96e-11 | 22 |
septum transversum | 4.96e-11 | 22 |
liver bud | 4.96e-11 | 22 |
digestive tract diverticulum | 1.90e-10 | 23 |
sac | 1.90e-10 | 23 |
exocrine gland | 2.01e-09 | 25 |
exocrine system | 2.01e-09 | 25 |
subdivision of trunk | 9.61e-08 | 66 |