FFCP PHASE1:Mm9::chr4:116798659..116798679,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78611 | |EntrezGene=78611 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-329bp_to_NR_024078,uc008uhy.2_5end | |association_with_transcript=-329bp_to_NR_024078,uc008uhy.2_5end | ||
|cluster_id=chr4:116798659..116798679,- | |||
|description=CAGE_peak_1_at_Btbd19_5end | |description=CAGE_peak_1_at_Btbd19_5end | ||
|id=chr4:116798659..116798679,- | |id=chr4:116798659..116798679,- | ||
|ontology_enrichment_celltype=CL:0000624!1.32e-09!8;CL:0000355!1.57e-09!9;CL:0000791!2.09e-08!9;CL:0000789!2.09e-08!9;CL:0002420!2.09e-08!9;CL:0002419!2.09e-08!9;CL:0000790!2.09e-08!9;CL:0000034!1.67e-07!97;CL:0000988!1.93e-07!32;CL:0002032!1.93e-07!32;CL:0000037!1.93e-07!32;CL:0000566!1.93e-07!32;CL:0000837!1.93e-07!32;CL:0000893!5.30e-07!6;CL:0002489!5.30e-07!6;CL:0000898!5.30e-07!6;CL:0000809!5.30e-07!6;CL:0000810!5.30e-07!6;CL:0000895!5.30e-07!6;CL:0000808!5.30e-07!6;CL:0000894!5.30e-07!6;CL:0000806!5.30e-07!6;CL:0000807!5.30e-07!6;CL:0000805!5.30e-07!6;CL:0002425!5.30e-07!6;CL:0002436!5.30e-07!6;CL:0002427!5.30e-07!6;CL:0002428!5.30e-07!6;CL:0002429!5.30e-07!6;CL:0002433!5.30e-07!6;CL:0002431!5.30e-07!6;CL:0002432!5.30e-07!6;CL:0000144!5.62e-07!121;CL:0000012!5.62e-07!121;CL:0000219!9.90e-07!54 | |ontology_enrichment_celltype=CL:0000624!1.32e-09!8;CL:0000355!1.57e-09!9;CL:0000791!2.09e-08!9;CL:0000789!2.09e-08!9;CL:0002420!2.09e-08!9;CL:0002419!2.09e-08!9;CL:0000790!2.09e-08!9;CL:0000034!1.67e-07!97;CL:0000988!1.93e-07!32;CL:0002032!1.93e-07!32;CL:0000037!1.93e-07!32;CL:0000566!1.93e-07!32;CL:0000837!1.93e-07!32;CL:0000893!5.30e-07!6;CL:0002489!5.30e-07!6;CL:0000898!5.30e-07!6;CL:0000809!5.30e-07!6;CL:0000810!5.30e-07!6;CL:0000895!5.30e-07!6;CL:0000808!5.30e-07!6;CL:0000894!5.30e-07!6;CL:0000806!5.30e-07!6;CL:0000807!5.30e-07!6;CL:0000805!5.30e-07!6;CL:0002425!5.30e-07!6;CL:0002436!5.30e-07!6;CL:0002427!5.30e-07!6;CL:0002428!5.30e-07!6;CL:0002429!5.30e-07!6;CL:0002433!5.30e-07!6;CL:0002431!5.30e-07!6;CL:0002432!5.30e-07!6;CL:0000144!5.62e-07!121;CL:0000012!5.62e-07!121;CL:0000219!9.90e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.73e-09,1;CL:0002078,1.73e-09,1;CL:0000115,1.73e-09,1;CL:0002262,1.73e-09,1;CL:1000398,1.73e-09,1;CL:0000355,1.50e-08,9 | |||
|ontology_enrichment_disease=DOID:0050686!2.82e-08!6;DOID:0060100!8.15e-07!3;DOID:4045!8.15e-07!3 | |ontology_enrichment_disease=DOID:0050686!2.82e-08!6;DOID:0060100!8.15e-07!3;DOID:4045!8.15e-07!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.36e-24,3;DOID:4045,2.36e-24,3;DOID:0050686,1.58e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.57e-09!9;UBERON:0002036!1.57e-09!9;UBERON:0002385!1.57e-09!9;UBERON:0000486!1.57e-09!9;UBERON:0001015!1.57e-09!9;UBERON:0004290!1.57e-09!9;UBERON:0003082!1.57e-09!9;UBERON:0000383!1.92e-08!10;UBERON:0002329!1.48e-07!11;UBERON:0003077!1.48e-07!11;UBERON:0003059!1.48e-07!11;UBERON:0007282!1.48e-07!11;UBERON:0009618!1.48e-07!11;UBERON:0007285!1.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.73e-09,1;UBERON:0001281,1.73e-09,1;UBERON:0000353,1.73e-09,1;UBERON:0003497,1.73e-09,1;UBERON:0003909,1.73e-09,1;UBERON:0003928,1.73e-09,1;UBERON:0003835,1.73e-09,1;UBERON:0003513,1.73e-09,1;UBERON:0001280,1.73e-09,1;UBERON:0004647,1.73e-09,1;UBERON:0002294,1.73e-09,1;UBERON:0001173,1.73e-09,1;UBERON:0004912,1.73e-09,1;UBERON:0005171,1.73e-09,1;UBERON:0001134,1.50e-08,9;UBERON:0002036,1.50e-08,9;UBERON:0002385,1.50e-08,9;UBERON:0000486,1.50e-08,9;UBERON:0007503,1.50e-08,9;UBERON:0001015,1.50e-08,9;UBERON:0002329,1.50e-08,9;UBERON:0003082,1.50e-08,9;UBERON:0003059,1.50e-08,9;UBERON:0007282,1.50e-08,9;UBERON:0004290,1.50e-08,9;UBERON:0009618,1.50e-08,9;UBERON:0000383,9.47e-08,10;UBERON:0007524,4.30e-07,11;UBERON:0003077,4.30e-07,11;UBERON:0007285,4.30e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,1.40438715793196,0.513653904676515,0.239316476986009,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,21.1763335691165,8.19654581950135,6.79714494243615,0.377690453926732,0.506884656097573,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,1.01987057996313,1.53946597556024,1.38199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,1.40438715793196,0.513653904676515,0.239316476986009,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,21.1763335691165,8.19654581950135,6.79714494243615,0.377690453926732,0.506884656097573,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,5.79728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,1.01987057996313,1.53946597556024,1.38199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Btbd19 | |short_description=p1@Btbd19 | ||
}} | }} |
Latest revision as of 05:32, 26 September 2015
Short description: | p1@Btbd19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Btbd19_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | -329bp_to_NR_024078, uc008uhy.2_5end |
EntrezGene: | Btbd19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.73e-09 | 1 |
meso-epithelial cell | 1.73e-09 | 1 |
endothelial cell | 1.73e-09 | 1 |
endothelial cell of sinusoid | 1.73e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.73e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.50e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.73e-09 | 1 |
hepatic sinusoid | 1.73e-09 | 1 |
parenchyma | 1.73e-09 | 1 |
abdomen blood vessel | 1.73e-09 | 1 |
sinusoid | 1.73e-09 | 1 |
digestive system duct | 1.73e-09 | 1 |
abdominal segment blood vessel | 1.73e-09 | 1 |
trunk blood vessel | 1.73e-09 | 1 |
liver parenchyma | 1.73e-09 | 1 |
liver lobule | 1.73e-09 | 1 |
biliary system | 1.73e-09 | 1 |
biliary tree | 1.73e-09 | 1 |
biliary bud | 1.73e-09 | 1 |
hepatic duct | 1.73e-09 | 1 |
skeletal muscle tissue | 1.50e-08 | 9 |
striated muscle tissue | 1.50e-08 | 9 |
muscle tissue | 1.50e-08 | 9 |
multilaminar epithelium | 1.50e-08 | 9 |
epithelial vesicle | 1.50e-08 | 9 |
musculature | 1.50e-08 | 9 |
somite | 1.50e-08 | 9 |
myotome | 1.50e-08 | 9 |
presomitic mesoderm | 1.50e-08 | 9 |
presumptive segmental plate | 1.50e-08 | 9 |
dermomyotome | 1.50e-08 | 9 |
trunk paraxial mesoderm | 1.50e-08 | 9 |
musculature of body | 9.47e-08 | 10 |
dense mesenchyme tissue | 4.30e-07 | 11 |
paraxial mesoderm | 4.30e-07 | 11 |
presumptive paraxial mesoderm | 4.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.36e-24 | 3 |
muscle cancer | 2.36e-24 | 3 |
organ system cancer | 1.58e-12 | 6 |