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FFCP PHASE1:Mm9::chr6:39157170..39157210,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=338523
|EntrezGene=338523
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q3UWM4
|UniProt=Q3UWM4
|association_with_transcript=-382bp_to_ENSMUST00000002305_5end
|association_with_transcript=-382bp_to_ENSMUST00000002305_5end
|cluster_id=chr6:39157170..39157210,-
|description=CAGE_peak_5_at_Jhdm1d_5end
|description=CAGE_peak_5_at_Jhdm1d_5end
|id=chr6:39157170..39157210,-
|id=chr6:39157170..39157210,-
|ontology_enrichment_celltype=CL:0000791!5.42e-07!9;CL:0000789!5.42e-07!9;CL:0002420!5.42e-07!9;CL:0002419!5.42e-07!9;CL:0000790!5.42e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,2.89e-11,9;CL:0000789,2.89e-11,9;CL:0002420,2.89e-11,9;CL:0002419,2.89e-11,9;CL:0000790,2.89e-11,9;CL:0000624,5.03e-10,8;CL:0000988,8.18e-10,32;CL:0002032,8.18e-10,32;CL:0000037,8.18e-10,32;CL:0000837,8.18e-10,32;CL:0000838,8.88e-10,12;CL:0000542,8.66e-09,13;CL:0000051,8.66e-09,13;CL:0000084,1.01e-08,11;CL:0000827,1.01e-08,11;CL:0002031,1.32e-08,25;CL:0000738,2.73e-08,17;CL:0002087,2.73e-08,17;CL:0000893,9.98e-08,6;CL:0002489,9.98e-08,6;CL:0000898,9.98e-08,6;CL:0000809,9.98e-08,6;CL:0000810,9.98e-08,6;CL:0000895,9.98e-08,6;CL:0000808,9.98e-08,6;CL:0000894,9.98e-08,6;CL:0000806,9.98e-08,6;CL:0000807,9.98e-08,6;CL:0000805,9.98e-08,6;CL:0002425,9.98e-08,6;CL:0002436,9.98e-08,6;CL:0002427,9.98e-08,6;CL:0002428,9.98e-08,6;CL:0002429,9.98e-08,6;CL:0002433,9.98e-08,6;CL:0002431,9.98e-08,6;CL:0002432,9.98e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!1.15e-07!45;UBERON:0003061!1.15e-07!45;UBERON:0002193!4.09e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.31e-08,10;UBERON:0000411,1.31e-08,10;UBERON:0001950,1.31e-08,10
|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.34303417529512,0.467225281191051,5.03580961422147,78.2785295163267,91.9873588445434,1.88339765048055,1.7549874978974,7.01922992717943,6.99363219351979,1.33243904726265,0.404950534779652,0,1.41957974411207,2.33094537129756,3.39511721438424,1.02051948181284,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0.86152399231815,0.861884930743556,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,10.4632907684227,3.906676722619,4.71171369576418,7.64700934440319,12.9778642142105,6.311634589405,0.503587271902309,1.11514624341466,0.367093504323363,0,0,0,0,0.139986421625363,0,6.04017381807851,13.0565185562042,17.8129713545506,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.605809546665472,1.96486056277642,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0.170430322578058,0.519572009205738,0,0.281686839553361,1.28326477414318,0,7.11066703153331,0,0,0,0.68510327831436,1.03575153458869,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.705532242814229,0,0,0.86759614151947,0.884610551949874,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0.766371165625774,2.75574786363617,0.599902730993408,2.79554499560742,0,2.74500361691176,0.125654352112864,1.91206752211504,2.04572365864264,0.20778804455956,0.324482526135515,0.305518091550949,1.7416975885413,7.58168275301024,0,0.130120442962704,0.229902104433473,0,0.60281927134286,0.476255494059295,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0,0.696504333044333,1.64625709126355,0.398068533636986,0.702213187313235,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,2.3131894342054,0.102904612379284,0.330418782983798,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0.474529061544512,0.658795818896044,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0,0.493588655687202,0,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,1.13494658742525,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,1.66277871149944,0.189491411770485,0,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,2.92700471786698,0.472905432318573,1.10732344824387,0.956728611944923,1.3109065177259,0.863424909329478,0,1.50791283939272,1.08781136763742,0,0.827810238914197,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.790575555893047,1.60660658210904,0.567760340833074,0.35613120733451,0.488660878060728,1.31976098378028,0,0,0.604647113929502,0.754420319023592,0,0.614870295887855,0.775284879504663,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.356737635204141,0.493647061806363,0.608929898229199,0.704015124191131,0,0.441056796109924,1.48397627647332,1.77610869365496,1.20625849856312,1.90995750405018,2.29797259643086,0.291480836629851,0,1.36696704638282,2.47664241555867,2.59272338317596,0,1.50363650493128,0.686334519619568,4.58941760983409,4.75834937900437,6.21899882119907,0,0,0,0.108005340821801,0,0.436725127492355,0.539457385539283,0.661227645802687,0,0.388844919875379,0.621339313086926,1.69107881605257,0.299033092087958,0,0.583353565032143,0.387479470433193,0.337912250981556,0.58678619322877,1.17183946359555,3.77493639932559,2.89900944991207,2.30424005006292,1.26404448251271,0,0,0.389762468933385,0.358053391334963,0.596044064343795,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,1.20991422164209,0.877120926657772,0.481059208201647,0.935015217452552,1.13365191807606,0,0,0,0.386379188064381,1.50145980360946,2.01466786693992,1.71494703263253,0.501572104035363,3.95326289831947,3.22227665555024,2.29158205375759,2.92150409984269,5.48066015816514,0,2.70009000092722,1.35096360967266,7.70342095273148,2.07104124700728,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.252697211763798,1.01391719956096,0.565879024158229,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,1.02860775715625,0,0.476872379894642,0.726732083161643,0.282328141245992,0.423073039458382,1.09756783723664,0.263069711437843,0.135804113845862,0.561142271657738,0.593175090620871,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,1.50409737833809,1.14772999241306,0.220591419119515,0.463735671240843
|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.34303417529512,0.467225281191051,5.03580961422147,78.2785295163267,91.9873588445434,1.88339765048055,1.7549874978974,7.01922992717943,6.99363219351979,1.33243904726265,0.404950534779652,0,1.41957974411207,2.33094537129756,3.39511721438424,1.02051948181284,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0.86152399231815,0.861884930743556,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,10.4632907684227,3.906676722619,4.71171369576418,7.64700934440319,12.9778642142105,6.311634589405,0.503587271902309,1.11514624341466,0.367093504323363,0,0,0,0,0.139986421625363,0,6.04017381807851,13.0565185562042,17.8129713545506,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.605809546665472,1.96486056277642,1.15945795480671,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0.170430322578058,0.519572009205738,0,0.281686839553361,1.28326477414318,0,7.11066703153331,0,0,0,0.68510327831436,1.03575153458869,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.705532242814229,0,0,0.86759614151947,0.884610551949874,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0,0.766371165625774,2.75574786363617,0.599902730993408,2.79554499560742,0,2.74500361691176,0.125654352112864,1.91206752211504,2.04572365864264,0.20778804455956,0.324482526135515,0.305518091550949,1.7416975885413,7.58168275301024,0,0.130120442962704,0.229902104433473,0,0.60281927134286,0.476255494059295,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0,0.696504333044333,1.64625709126355,0.398068533636986,0.702213187313235,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,2.3131894342054,0.102904612379284,0.330418782983798,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0.474529061544512,0.658795818896044,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0,0.493588655687202,0,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,1.13494658742525,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,1.66277871149944,0.189491411770485,0,0.169745085775188,0.234690248288502,0.837531287209079,0.952174563544055,2.92700471786698,0.472905432318573,1.10732344824387,0.956728611944923,1.3109065177259,0.863424909329478,0,1.50791283939272,1.08781136763742,0,0.827810238914197,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.790575555893047,1.60660658210904,0.567760340833074,0.35613120733451,0.488660878060728,1.31976098378028,0,0,0.604647113929502,0.754420319023592,0,0.614870295887855,0.775284879504663,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.356737635204141,0.493647061806363,0.608929898229199,0.704015124191131,0,0.441056796109924,1.48397627647332,1.77610869365496,1.20625849856312,1.90995750405018,2.29797259643086,0.291480836629851,0,1.36696704638282,2.47664241555867,2.59272338317596,0,1.50363650493128,0.686334519619568,4.58941760983409,4.75834937900437,6.21899882119907,0,0,0,0.108005340821801,0,0.436725127492355,0.539457385539283,0.661227645802687,0,0.388844919875379,0.621339313086926,1.69107881605257,0.299033092087958,0,0.583353565032143,0.387479470433193,0.337912250981556,0.58678619322877,1.17183946359555,3.77493639932559,2.89900944991207,2.30424005006292,1.26404448251271,0,0,0.389762468933385,0.358053391334963,0.596044064343795,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,1.20991422164209,0.877120926657772,0.481059208201647,0.935015217452552,1.13365191807606,0,0,0,0.386379188064381,1.50145980360946,2.01466786693992,1.71494703263253,0.501572104035363,3.95326289831947,3.22227665555024,2.29158205375759,2.92150409984269,5.48066015816514,0,2.70009000092722,1.35096360967266,7.70342095273148,2.07104124700728,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,1.23621034343337,0.320919209591815,0.252697211763798,1.01391719956096,0.565879024158229,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,1.02860775715625,0,0.476872379894642,0.726732083161643,0.282328141245992,0.423073039458382,1.09756783723664,0.263069711437843,0.135804113845862,0.561142271657738,0.593175090620871,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,1.50409737833809,1.14772999241306,0.220591419119515,0.463735671240843
|short_description=p5@Jhdm1d
|short_description=p5@Jhdm1d
}}
}}

Latest revision as of 03:48, 27 September 2015

Short description:p5@Jhdm1d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Jhdm1d_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -382bp_to_ENSMUST00000002305_5end
EntrezGene:Jhdm1d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Jhdm1d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E778.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F291.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.80
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.89e-119
alpha-beta T cell2.89e-119
immature T cell2.89e-119
mature T cell2.89e-119
immature alpha-beta T cell2.89e-119
CD4-positive, alpha-beta T cell5.03e-108
hematopoietic cell8.18e-1032
hematopoietic oligopotent progenitor cell8.18e-1032
hematopoietic stem cell8.18e-1032
hematopoietic multipotent progenitor cell8.18e-1032
lymphoid lineage restricted progenitor cell8.88e-1012
lymphocyte8.66e-0913
common lymphoid progenitor8.66e-0913
T cell1.01e-0811
pro-T cell1.01e-0811
hematopoietic lineage restricted progenitor cell1.32e-0825
leukocyte2.73e-0817
nongranular leukocyte2.73e-0817
thymocyte9.98e-086
double negative thymocyte9.98e-086
naive T cell9.98e-086
double-positive, alpha-beta thymocyte9.98e-086
CD4-positive, alpha-beta thymocyte9.98e-086
naive thymus-derived CD4-positive, alpha-beta T cell9.98e-086
DN4 thymocyte9.98e-086
DN1 thymic pro-T cell9.98e-086
DN2 thymocyte9.98e-086
DN3 thymocyte9.98e-086
immature single positive thymocyte9.98e-086
early T lineage precursor9.98e-086
mature CD4 single-positive thymocyte9.98e-086
resting double-positive thymocyte9.98e-086
double-positive blast9.98e-086
CD69-positive double-positive thymocyte9.98e-086
CD69-positive, CD4-positive single-positive thymocyte9.98e-086
CD4-positive, CD8-intermediate double-positive thymocyte9.98e-086
CD24-positive, CD4 single-positive thymocyte9.98e-086

Uber anatomy
Ontology termp-valuen
occipital lobe1.31e-0810
visual cortex1.31e-0810
neocortex1.31e-0810
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