FFCP PHASE1:Mm9::chr13:94073729..94073743,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26556 | |EntrezGene=26556 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UVL6 | |UniProt=Q3UVL6 | ||
|association_with_transcript=17bp_to_ENSMUST00000109494_5end | |association_with_transcript=17bp_to_ENSMUST00000109494_5end | ||
|cluster_id=chr13:94073729..94073743,+ | |||
|description=CAGE_peak_2_at_Homer1_5end | |description=CAGE_peak_2_at_Homer1_5end | ||
|id=chr13:94073729..94073743,+ | |id=chr13:94073729..94073743,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.58e-07,9;CL:0000789,3.58e-07,9;CL:0002420,3.58e-07,9;CL:0002419,3.58e-07,9;CL:0000790,3.58e-07,9;CL:0002563,6.77e-07,9;CL:0002251,6.77e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!2.74e-09!21;UBERON:0001869!2.74e-09!21;UBERON:0000203!2.74e-09!21;UBERON:0002020!8.64e-09!34;UBERON:0002791!1.19e-08!29;UBERON:0003528!1.19e-08!29;UBERON:0001893!1.19e-08!29;UBERON:0000955!1.53e-08!50;UBERON:0006238!1.53e-08!50;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0003080!4.21e-08!40;UBERON:0002616!4.65e-08!49;UBERON:0002780!7.87e-08!39;UBERON:0001890!7.87e-08!39;UBERON:0006240!7.87e-08!39;UBERON:0001049!8.57e-08!52;UBERON:0005068!8.57e-08!52;UBERON:0006241!8.57e-08!52;UBERON:0007135!8.57e-08!52;UBERON:0002619!1.81e-07!17;UBERON:0000064!2.01e-07!99;UBERON:0007811!2.86e-07!86;UBERON:0000033!3.00e-07!63;UBERON:0000153!4.59e-07!94;UBERON:0000073!8.82e-07!75;UBERON:0001016!8.82e-07!75 | |ontology_enrichment_uberon=UBERON:0000956!2.74e-09!21;UBERON:0001869!2.74e-09!21;UBERON:0000203!2.74e-09!21;UBERON:0002020!8.64e-09!34;UBERON:0002791!1.19e-08!29;UBERON:0003528!1.19e-08!29;UBERON:0001893!1.19e-08!29;UBERON:0000955!1.53e-08!50;UBERON:0006238!1.53e-08!50;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0003080!4.21e-08!40;UBERON:0002616!4.65e-08!49;UBERON:0002780!7.87e-08!39;UBERON:0001890!7.87e-08!39;UBERON:0006240!7.87e-08!39;UBERON:0001049!8.57e-08!52;UBERON:0005068!8.57e-08!52;UBERON:0006241!8.57e-08!52;UBERON:0007135!8.57e-08!52;UBERON:0002619!1.81e-07!17;UBERON:0000064!2.01e-07!99;UBERON:0007811!2.86e-07!86;UBERON:0000033!3.00e-07!63;UBERON:0000153!4.59e-07!94;UBERON:0000073!8.82e-07!75;UBERON:0001016!8.82e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.56e-12,21;UBERON:0001869,1.56e-12,21;UBERON:0000203,1.56e-12,21;UBERON:0002020,2.06e-12,34;UBERON:0003528,4.58e-12,29;UBERON:0002791,4.58e-12,29;UBERON:0001893,4.58e-12,29;UBERON:0000073,6.79e-12,54;UBERON:0001049,5.04e-11,52;UBERON:0005068,5.04e-11,52;UBERON:0006241,5.04e-11,52;UBERON:0007135,5.04e-11,52;UBERON:0000955,6.50e-11,47;UBERON:0006238,6.50e-11,47;UBERON:0003080,1.06e-10,40;UBERON:0001016,2.16e-10,75;UBERON:0002021,2.31e-10,10;UBERON:0000411,2.31e-10,10;UBERON:0001950,2.31e-10,10;UBERON:0002780,2.46e-10,39;UBERON:0001890,2.46e-10,39;UBERON:0006240,2.46e-10,39;UBERON:0002616,2.94e-10,46;UBERON:0002619,4.36e-10,17;UBERON:0001017,6.00e-10,73;UBERON:0010314,2.06e-08,92;UBERON:0000485,2.56e-08,11;UBERON:0002346,1.68e-07,64;UBERON:0003075,1.68e-07,64;UBERON:0007284,1.68e-07,64;UBERON:0010371,2.27e-07,73;UBERON:0004121,2.55e-07,95;UBERON:0000924,2.55e-07,95;UBERON:0006601,2.55e-07,95;UBERON:0003056,2.72e-07,49;UBERON:0003350,6.77e-07,9;UBERON:0004808,6.77e-07,9;UBERON:0001277,6.77e-07,9 | |||
|phase1_expression=11.8510146857548,8.37540978334467,6.3699893514535,17.5429242557961,25.5456822272637,7.21880869221126,6.77476657727024,16.9151553708465,35.1971805379167,35.811872527265,2.05461561870606,1.83475965689274,13.353656934634,10.1407666806037,0,0.607425802169478,0,0.788655413395594,0.822686601634433,0.84877930359606,13.0116233931137,0.695036658406197,0.261199789138935,0.47997726838022,0.68822784320151,5.7423196411502,1.7230479846363,3.878482188346,0.950117097281869,0.252030129759931,0.221730510655305,5.08024538767705,2.46025915033828,0,4.04392267651784,1.99481574430191,7.14592746918292,2.09265815368454,7.813353445238,3.14114246384279,21.7645650571475,12.294818729252,3.88408282424923,0.251793635951155,0.709638518536602,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,10.5703041816374,36.2681071005672,14.1159395639835,1.28629718017973,0.85960031981627,2.06268836910977,1.21389876515759,3.70293685490423,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,3.31806759387129,4.3201900266141,4.20649922702764,1.14260393761521,0.220868540951614,1.83736198822431,1.24599112323707,4.5960939330501,1.10115880999389,2.55374676170375,3.84016333140609,1.05509030184155,0.823388792421687,0,1.3959149950069,0,3.81995619442025,1.47314292736834,1.85083185038834,2.42319279572891,1.4387976733305,1.28471652181535,10.1452571045587,0,5.439770669662,0.539703191637817,0,0,3.08977724289854,0.170430322578058,0.259786004602869,0,17.6054274720851,1.28326477414318,0,0,0,0.253359865475099,0,4.11061966988616,1.29468941823586,5.04703272820404,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.251333182659351,0,0.433798070759735,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.585561594023094,1.67557365450764,0.510914110417183,0.838705871541442,2.99951365496704,0.889491589511453,2.09706895166752,65.8800868058822,6.65968066198181,87.0859844163305,77.9932144857508,11.4283424507758,23.2005006186893,0.407357455401265,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.689706313300419,0.180062129805349,0.150704817835715,1.02054748726992,0.640568601424249,0.281105173679186,0.776110112217047,1.29340795759705,0.945530400839096,0.703804496655795,0.43839146485515,1.39023624612799,0,0.61734640922383,0.398068533636986,0.702213187313235,2.31613116403244,0.852490498186778,2.89976081549703,0.703578179943289,0.36012412292203,0.946978942340841,1.18058539048442,0.617068451549513,0.697601834251224,1.07309360559848,2.91913355917924,0.658239399653922,1.47750717671186,2.10778904819225,4.38599962275997,2.19550115291051,2.68412837520744,30.4920425417985,4.52780294468852,0.660837565967596,1.05780226665418,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.757736633841335,0,0.482443521363367,0.554259570499814,0.568474235311454,0.488894929326078,0.339490171550376,0,0,0,0.780534591431195,0.315270288212382,0.664394068946325,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.24770825982909,2.69586879162067,0,2.7771801992481,0.315508219416257,0,1.07711698866399,0.716906393857656,0.668396022247182,0,0.809621403349789,0.292255857911312,0,47.5555548304274,1.41940085208269,0.35613120733451,1.62886959353576,1.15479086080775,0,0.242780636154981,0,0.565815239267694,0,0,0.516856586336442,0,0.712994756769443,0,0,0,25.5329704315341,0.36012218806262,0.129358683782755,0.214337035031592,1.06404140185364,0.713475270408282,0.658196082408484,0.608929898229199,0.469343416127421,1.48282449604674,0.441056796109924,1.31909002353184,0.484393280087717,0.241251699712623,0.716234064018819,1.31312719796049,0.291480836629851,1.11255181206306,0.683483523191411,0.206386867963223,0.555583582109135,1.31857919903284,0.410082683163076,0,3.56954702987096,3.35883485576779,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.648074866458964,0,1.69107881605257,0.598066184175915,0.330916980914195,1.94451188344048,0.645799117388655,0.337912250981556,0.821500670520278,1.95306577265925,2.72634295506848,1.69108884578204,3.16833006883652,1.26404448251271,0.202725215290164,0.205421914329655,0.649604114888975,0.537080087002444,0.993406773906324,0.120195449519969,0.738447635872886,0.706765149637033,0.762068066549998,0.604957110821043,0.682205165178267,0.769694733122636,1.5193997283604,1.36038230169127,0.443971906748129,0.179427713218951,0.335769232728157,0.965947970160952,0.750729901804728,1.46521299413812,0.428736758158132,0,55.3456805764725,54.778703144354,76.1951032874397,82.48952752497,133.591091355275,59.6761178937863,104.62848753593,149.956960673665,201.195229588987,153.257052278539,0.62272408550506,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,1.83843508450014,0.44449345560323,1.64828045791115,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,0.448176066834085,0.516919220600519,0.952587382566147,1.27472758539341,0.77163688185482,0,0.883193520806384,1.02860775715625,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,1.06771516311757,0.492522411877817,0,0.77468420592983,1.35034627686799,1.24905288968973,0.935726433781634,1.07435527024149,1.91288332068843,1.32354851471709,1.15933917810211 | |phase1_expression=11.8510146857548,8.37540978334467,6.3699893514535,17.5429242557961,25.5456822272637,7.21880869221126,6.77476657727024,16.9151553708465,35.1971805379167,35.811872527265,2.05461561870606,1.83475965689274,13.353656934634,10.1407666806037,0,0.607425802169478,0,0.788655413395594,0.822686601634433,0.84877930359606,13.0116233931137,0.695036658406197,0.261199789138935,0.47997726838022,0.68822784320151,5.7423196411502,1.7230479846363,3.878482188346,0.950117097281869,0.252030129759931,0.221730510655305,5.08024538767705,2.46025915033828,0,4.04392267651784,1.99481574430191,7.14592746918292,2.09265815368454,7.813353445238,3.14114246384279,21.7645650571475,12.294818729252,3.88408282424923,0.251793635951155,0.709638518536602,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,10.5703041816374,36.2681071005672,14.1159395639835,1.28629718017973,0.85960031981627,2.06268836910977,1.21389876515759,3.70293685490423,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,3.31806759387129,4.3201900266141,4.20649922702764,1.14260393761521,0.220868540951614,1.83736198822431,1.24599112323707,4.5960939330501,1.10115880999389,2.55374676170375,3.84016333140609,1.05509030184155,0.823388792421687,0,1.3959149950069,0,3.81995619442025,1.47314292736834,1.85083185038834,2.42319279572891,1.4387976733305,1.28471652181535,10.1452571045587,0,5.439770669662,0.539703191637817,0,0,3.08977724289854,0.170430322578058,0.259786004602869,0,17.6054274720851,1.28326477414318,0,0,0,0.253359865475099,0,4.11061966988616,1.29468941823586,5.04703272820404,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.251333182659351,0,0.433798070759735,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.585561594023094,1.67557365450764,0.510914110417183,0.838705871541442,2.99951365496704,0.889491589511453,2.09706895166752,65.8800868058822,6.65968066198181,87.0859844163305,77.9932144857508,11.4283424507758,23.2005006186893,0.407357455401265,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.689706313300419,0.180062129805349,0.150704817835715,1.02054748726992,0.640568601424249,0.281105173679186,0.776110112217047,1.29340795759705,0.945530400839096,0.703804496655795,0.43839146485515,1.39023624612799,0,0.61734640922383,0.398068533636986,0.702213187313235,2.31613116403244,0.852490498186778,2.89976081549703,0.703578179943289,0.36012412292203,0.946978942340841,1.18058539048442,0.617068451549513,0.697601834251224,1.07309360559848,2.91913355917924,0.658239399653922,1.47750717671186,2.10778904819225,4.38599962275997,2.19550115291051,2.68412837520744,30.4920425417985,4.52780294468852,0.660837565967596,1.05780226665418,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.757736633841335,0,0.482443521363367,0.554259570499814,0.568474235311454,0.488894929326078,0.339490171550376,0,0,0,0.780534591431195,0.315270288212382,0.664394068946325,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.24770825982909,2.69586879162067,0,2.7771801992481,0.315508219416257,0,1.07711698866399,0.716906393857656,0.668396022247182,0,0.809621403349789,0.292255857911312,0,47.5555548304274,1.41940085208269,0.35613120733451,1.62886959353576,1.15479086080775,0,0.242780636154981,0,0.565815239267694,0,0,0.516856586336442,0,0.712994756769443,0,0,0,25.5329704315341,0.36012218806262,0.129358683782755,0.214337035031592,1.06404140185364,0.713475270408282,0.658196082408484,0.608929898229199,0.469343416127421,1.48282449604674,0.441056796109924,1.31909002353184,0.484393280087717,0.241251699712623,0.716234064018819,1.31312719796049,0.291480836629851,1.11255181206306,0.683483523191411,0.206386867963223,0.555583582109135,1.31857919903284,0.410082683163076,0,3.56954702987096,3.35883485576779,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.648074866458964,0,1.69107881605257,0.598066184175915,0.330916980914195,1.94451188344048,0.645799117388655,0.337912250981556,0.821500670520278,1.95306577265925,2.72634295506848,1.69108884578204,3.16833006883652,1.26404448251271,0.202725215290164,0.205421914329655,0.649604114888975,0.537080087002444,0.993406773906324,0.120195449519969,0.738447635872886,0.706765149637033,0.762068066549998,0.604957110821043,0.682205165178267,0.769694733122636,1.5193997283604,1.36038230169127,0.443971906748129,0.179427713218951,0.335769232728157,0.965947970160952,0.750729901804728,1.46521299413812,0.428736758158132,0,55.3456805764725,54.778703144354,76.1951032874397,82.48952752497,133.591091355275,59.6761178937863,104.62848753593,149.956960673665,201.195229588987,153.257052278539,0.62272408550506,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,1.83843508450014,0.44449345560323,1.64828045791115,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,0.448176066834085,0.516919220600519,0.952587382566147,1.27472758539341,0.77163688185482,0,0.883193520806384,1.02860775715625,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,1.06771516311757,0.492522411877817,0,0.77468420592983,1.35034627686799,1.24905288968973,0.935726433781634,1.07435527024149,1.91288332068843,1.32354851471709,1.15933917810211 | ||
|short_description=p2@Homer1 | |short_description=p2@Homer1 | ||
}} | }} |
Latest revision as of 00:27, 2 October 2015
Short description: | p2@Homer1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Homer1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 17bp_to_ENSMUST00000109494_5end |
EntrezGene: | Homer1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.58e-07 | 9 |
alpha-beta T cell | 3.58e-07 | 9 |
immature T cell | 3.58e-07 | 9 |
mature T cell | 3.58e-07 | 9 |
immature alpha-beta T cell | 3.58e-07 | 9 |
intestinal epithelial cell | 6.77e-07 | 9 |
epithelial cell of alimentary canal | 6.77e-07 | 9 |