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FFCP PHASE1:Mm9::chr6:144157924..144157955,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20678
|EntrezGene=20678
|HGNC=
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=Q2TBA9
|UniProt=Q2TBA9
|association_with_transcript=16bp_to_ENSMUST00000077160_5end
|association_with_transcript=16bp_to_ENSMUST00000077160_5end
|cluster_id=chr6:144157924..144157955,-
|description=CAGE_peak_2_at_Sox5_5end
|description=CAGE_peak_2_at_Sox5_5end
|id=chr6:144157924..144157955,-
|id=chr6:144157924..144157955,-
|ontology_enrichment_celltype=CL:0000540!4.41e-11!33;CL:0000047!4.41e-11!33;CL:0000031!4.41e-11!33;CL:0000404!4.41e-11!33;CL:0000393!2.67e-08!39;CL:0000211!2.67e-08!39;CL:0000221!1.21e-07!44;CL:0000133!1.21e-07!44;CL:0002319!2.92e-07!43;CL:0000117!6.58e-07!23;CL:0000337!6.58e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.16e-11,33;CL:0000047,1.16e-11,33;CL:0000031,1.16e-11,33;CL:0000404,1.16e-11,33;CL:0000393,1.71e-08,39;CL:0000211,1.71e-08,39;CL:0002609,2.14e-07,6;CL:0000221,2.17e-07,44;CL:0000133,2.17e-07,44;CL:0002319,6.17e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.13e-18!73;UBERON:0005743!1.13e-18!73;UBERON:0000073!4.81e-18!75;UBERON:0001016!4.81e-18!75;UBERON:0001049!2.03e-16!52;UBERON:0005068!2.03e-16!52;UBERON:0006241!2.03e-16!52;UBERON:0007135!2.03e-16!52;UBERON:0003080!5.91e-16!40;UBERON:0002780!6.05e-16!39;UBERON:0001890!6.05e-16!39;UBERON:0006240!6.05e-16!39;UBERON:0002020!2.46e-14!34;UBERON:0002616!2.56e-14!49;UBERON:0000955!3.58e-14!50;UBERON:0006238!3.58e-14!50;UBERON:0003056!6.23e-14!49;UBERON:0000033!1.40e-13!63;UBERON:0002791!1.41e-13!29;UBERON:0003528!1.41e-13!29;UBERON:0001893!1.41e-13!29;UBERON:0002346!1.96e-13!71;UBERON:0003075!1.96e-13!71;UBERON:0007284!1.96e-13!71;UBERON:0004121!6.40e-13!102;UBERON:0000924!6.40e-13!102;UBERON:0006601!6.40e-13!102;UBERON:0000956!1.60e-11!21;UBERON:0001869!1.60e-11!21;UBERON:0000203!1.60e-11!21;UBERON:0000025!3.50e-11!114;UBERON:0004111!4.76e-11!122;UBERON:0002619!6.67e-09!17;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0000153!4.44e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.25e-18,39;UBERON:0001890,1.25e-18,39;UBERON:0006240,1.25e-18,39;UBERON:0001017,3.72e-18,73;UBERON:0003080,7.84e-18,40;UBERON:0001016,3.52e-17,75;UBERON:0001049,1.09e-16,52;UBERON:0005068,1.09e-16,52;UBERON:0006241,1.09e-16,52;UBERON:0007135,1.09e-16,52;UBERON:0002616,1.28e-16,46;UBERON:0002020,3.24e-16,34;UBERON:0000955,5.65e-16,47;UBERON:0006238,5.65e-16,47;UBERON:0003528,6.77e-16,29;UBERON:0002791,6.77e-16,29;UBERON:0001893,6.77e-16,29;UBERON:0000073,1.57e-15,54;UBERON:0002346,2.09e-15,64;UBERON:0003075,2.09e-15,64;UBERON:0007284,2.09e-15,64;UBERON:0000956,5.76e-15,21;UBERON:0001869,5.76e-15,21;UBERON:0000203,5.76e-15,21;UBERON:0003056,6.15e-14,49;UBERON:0010371,1.67e-13,73;UBERON:0004121,1.20e-12,95;UBERON:0000924,1.20e-12,95;UBERON:0006601,1.20e-12,95;UBERON:0002619,1.90e-11,17;UBERON:0010314,8.73e-10,92;UBERON:0002021,1.41e-09,10;UBERON:0000411,1.41e-09,10;UBERON:0001950,1.41e-09,10;UBERON:0004111,1.44e-09,122;UBERON:0000025,5.63e-09,114;UBERON:0002102,5.57e-07,7;UBERON:0004710,5.57e-07,7;UBERON:0005419,5.57e-07,7;UBERON:0005417,5.57e-07,7;UBERON:0005729,5.57e-07,7
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.898800331555214,0,41.3721553110826,35.9115795962297,39.5410927340598,1.14260393761521,1.98781686856452,12.0040983230655,11.1180746381154,15.6267193723704,0,0.893811366596314,0.153606533256243,3.69281605644543,2.74462930807229,4.68822033501084,0.837548997004143,1.68828783009504,1.06958773443767,1.47314292736834,1.99320353118744,0.745597783301202,0.075726193333184,0.151143120213571,0.869593466105033,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,5.82434953226536,0.561777680527007,0,0.259786004602869,0,2.81686839553361,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0,0,0,0,0,1.94120219936891,1.32504911076236,0.969750506270444,0,1.46390398505774,2.09446706813455,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,2.1361239859187,2.78118912307642,4.85859368927628,2.28566849015516,2.10913641988085,0.101839363850316,0.622034853050465,0,0.210441855886474,0.520481771850815,0,0,0.150704817835715,0.476255494059295,0.768682321709099,1.49922759295566,1.81092359517311,4.095791865724,9.26619792822314,9.32540958068929,3.5071317188412,7.50727572909114,4.52727816478817,2.67516777330327,0.199034266818493,0,0,0,2.07125772535502,2.11073453982987,0.720248245844059,1.18372367792605,0.590292695242212,1.54267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,2.3131894342054,5.24813523134351,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.795825888164603,0.38992817423824,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0,0,0,0,4.15033677922008,0.333690211432188,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,0,1.43768206527355,2.23284568601102,4.05648975048929,2.77836765741823,3.40855085691633,3.37710464954357,0,2.08440552947533,1.79261474086228,0.509235257325564,0.704070744865506,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0.983528546038072,0.275936746304732,1.28440471990234,0.820481806145422,0.163934945376675,0.252470927204373,2.2085575359138,3.51394869866975,4.09304455692318,2.38968797952552,2.67358408898873,2.54768877709949,3.23848561339915,1.16902343164525,3.95287777946523,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.70219802876894,3.78128297465751,1.16422815404479,3.21505552547388,1.59606210278046,1.60531935841864,1.31639216481697,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.69975726161829,0.276399947608848,0,1.10717597753397,1.01659733563424,0.756037385752609,0.836353184057875,0.436725127492355,0,0.330613822901344,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,1.35232715822533,0.375364950902364,0.183151624267265,0,0,6.7770221114048,4.60325236507177,6.87474616127276,4.46818274093588,4.7955776383945,3.0215755895588,4.72515750162264,6.30449684513909,5.43770890781046,4.14208249401456,1.86817225651518,5.1873233542134,3.41467211508268,3.64660075602441,0.628839487883947,1.65459157605013,1.33348036680969,2.06035057238894,1.60459604795908,1.51618327058278,2.5347929989024,2.07488975524684,1.77918864192777,1.72867911493147,1.49332219284595,2.38146845641537,1.62238056322798,1.54327376370964,0.412085900803307,1.91358596174717,2.74295401908332,1.95223386775271,2.14592570952589,1.45346416632329,1.2234219453993,1.86152137361688,1.46342378298218,1.31534855718921,1.49384525230448,5.05028044491965,2.01679530811096,2.26560309463796,2.86461730218783,1.08455788830176,1.73615949883027,4.99621155875892,1.63752125911786,2.36358159453128,2.29545998482612,0.882365676478062,0.927471342481686
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.898800331555214,0,41.3721553110826,35.9115795962297,39.5410927340598,1.14260393761521,1.98781686856452,12.0040983230655,11.1180746381154,15.6267193723704,0,0.893811366596314,0.153606533256243,3.69281605644543,2.74462930807229,4.68822033501084,0.837548997004143,1.68828783009504,1.06958773443767,1.47314292736834,1.99320353118744,0.745597783301202,0.075726193333184,0.151143120213571,0.869593466105033,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,5.82434953226536,0.561777680527007,0,0.259786004602869,0,2.81686839553361,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0,0,0,0,0,1.94120219936891,1.32504911076236,0.969750506270444,0,1.46390398505774,2.09446706813455,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,2.1361239859187,2.78118912307642,4.85859368927628,2.28566849015516,2.10913641988085,0.101839363850316,0.622034853050465,0,0.210441855886474,0.520481771850815,0,0,0.150704817835715,0.476255494059295,0.768682321709099,1.49922759295566,1.81092359517311,4.095791865724,9.26619792822314,9.32540958068929,3.5071317188412,7.50727572909114,4.52727816478817,2.67516777330327,0.199034266818493,0,0,0,2.07125772535502,2.11073453982987,0.720248245844059,1.18372367792605,0.590292695242212,1.54267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,2.3131894342054,5.24813523134351,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.795825888164603,0.38992817423824,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0,0,0,0,4.15033677922008,0.333690211432188,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,0,1.43768206527355,2.23284568601102,4.05648975048929,2.77836765741823,3.40855085691633,3.37710464954357,0,2.08440552947533,1.79261474086228,0.509235257325564,0.704070744865506,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0.983528546038072,0.275936746304732,1.28440471990234,0.820481806145422,0.163934945376675,0.252470927204373,2.2085575359138,3.51394869866975,4.09304455692318,2.38968797952552,2.67358408898873,2.54768877709949,3.23848561339915,1.16902343164525,3.95287777946523,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.70219802876894,3.78128297465751,1.16422815404479,3.21505552547388,1.59606210278046,1.60531935841864,1.31639216481697,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.69975726161829,0.276399947608848,0,1.10717597753397,1.01659733563424,0.756037385752609,0.836353184057875,0.436725127492355,0,0.330613822901344,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,1.35232715822533,0.375364950902364,0.183151624267265,0,0,6.7770221114048,4.60325236507177,6.87474616127276,4.46818274093588,4.7955776383945,3.0215755895588,4.72515750162264,6.30449684513909,5.43770890781046,4.14208249401456,1.86817225651518,5.1873233542134,3.41467211508268,3.64660075602441,0.628839487883947,1.65459157605013,1.33348036680969,2.06035057238894,1.60459604795908,1.51618327058278,2.5347929989024,2.07488975524684,1.77918864192777,1.72867911493147,1.49332219284595,2.38146845641537,1.62238056322798,1.54327376370964,0.412085900803307,1.91358596174717,2.74295401908332,1.95223386775271,2.14592570952589,1.45346416632329,1.2234219453993,1.86152137361688,1.46342378298218,1.31534855718921,1.49384525230448,5.05028044491965,2.01679530811096,2.26560309463796,2.86461730218783,1.08455788830176,1.73615949883027,4.99621155875892,1.63752125911786,2.36358159453128,2.29545998482612,0.882365676478062,0.927471342481686
|short_description=p2@Sox5
|short_description=p2@Sox5
}}
}}

Latest revision as of 21:46, 26 September 2015

Short description:p2@Sox5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sox5_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 16bp_to_ENSMUST00000077160_5end
EntrezGene:Sox5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sox5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D939.54
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.16e-1133
neuronal stem cell1.16e-1133
neuroblast1.16e-1133
electrically signaling cell1.16e-1133
electrically responsive cell1.71e-0839
electrically active cell1.71e-0839
neuron of cerebral cortex2.14e-076
ectodermal cell2.17e-0744
neurectodermal cell2.17e-0744
neural cell6.17e-0743

Uber anatomy
Ontology termp-valuen
regional part of forebrain1.25e-1839
forebrain1.25e-1839
future forebrain1.25e-1839
central nervous system3.72e-1873
anterior neural tube7.84e-1840
nervous system3.52e-1775
neural tube1.09e-1652
neural rod1.09e-1652
future spinal cord1.09e-1652
neural keel1.09e-1652
regional part of brain1.28e-1646
gray matter3.24e-1634
brain5.65e-1647
future brain5.65e-1647
brain grey matter6.77e-1629
regional part of telencephalon6.77e-1629
telencephalon6.77e-1629
regional part of nervous system1.57e-1554
neurectoderm2.09e-1564
neural plate2.09e-1564
presumptive neural plate2.09e-1564
cerebral cortex5.76e-1521
cerebral hemisphere5.76e-1521
pallium5.76e-1521
pre-chordal neural plate6.15e-1449
ecto-epithelium1.67e-1373
ectoderm-derived structure1.20e-1295
ectoderm1.20e-1295
presumptive ectoderm1.20e-1295
regional part of cerebral cortex1.90e-1117
structure with developmental contribution from neural crest8.73e-1092
occipital lobe1.41e-0910
visual cortex1.41e-0910
neocortex1.41e-0910
anatomical conduit1.44e-09122
tube5.63e-09114
forelimb5.57e-077
pectoral appendage5.57e-077
pectoral appendage bud5.57e-077
forelimb bud5.57e-077
forelimb/pectoral fin field5.57e-077
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