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FFCP PHASE1:Mm9::chr13:42962216..42962267,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218194
|EntrezGene=218194
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=13bp_to_ENSMUST00000127859_5end
|association_with_transcript=13bp_to_ENSMUST00000127859_5end
|cluster_id=chr13:42962216..42962267,+
|description=CAGE_peak_3_at_Phactr1_5end
|description=CAGE_peak_3_at_Phactr1_5end
|id=chr13:42962216..42962267,+
|id=chr13:42962216..42962267,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.64e-10!63;UBERON:0000955!4.86e-10!50;UBERON:0006238!4.86e-10!50;UBERON:0001049!9.63e-10!52;UBERON:0005068!9.63e-10!52;UBERON:0006241!9.63e-10!52;UBERON:0007135!9.63e-10!52;UBERON:0002616!1.50e-09!49;UBERON:0000025!2.15e-09!114;UBERON:0004111!7.83e-09!122;UBERON:0002346!9.10e-09!71;UBERON:0003075!9.10e-09!71;UBERON:0007284!9.10e-09!71;UBERON:0001017!1.65e-07!73;UBERON:0005743!1.65e-07!73;UBERON:0002021!4.42e-07!10;UBERON:0000411!4.42e-07!10;UBERON:0001950!4.42e-07!10;UBERON:0002020!4.99e-07!34;UBERON:0000073!7.96e-07!75;UBERON:0001016!7.96e-07!75
|ontology_enrichment_uberon=UBERON:0000033!4.64e-10!63;UBERON:0000955!4.86e-10!50;UBERON:0006238!4.86e-10!50;UBERON:0001049!9.63e-10!52;UBERON:0005068!9.63e-10!52;UBERON:0006241!9.63e-10!52;UBERON:0007135!9.63e-10!52;UBERON:0002616!1.50e-09!49;UBERON:0000025!2.15e-09!114;UBERON:0004111!7.83e-09!122;UBERON:0002346!9.10e-09!71;UBERON:0003075!9.10e-09!71;UBERON:0007284!9.10e-09!71;UBERON:0001017!1.65e-07!73;UBERON:0005743!1.65e-07!73;UBERON:0002021!4.42e-07!10;UBERON:0000411!4.42e-07!10;UBERON:0001950!4.42e-07!10;UBERON:0002020!4.99e-07!34;UBERON:0000073!7.96e-07!75;UBERON:0001016!7.96e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.30e-19,54;UBERON:0001049,1.93e-17,52;UBERON:0005068,1.93e-17,52;UBERON:0006241,1.93e-17,52;UBERON:0007135,1.93e-17,52;UBERON:0001017,2.68e-16,73;UBERON:0000025,1.35e-15,114;UBERON:0002346,1.36e-15,64;UBERON:0003075,1.36e-15,64;UBERON:0007284,1.36e-15,64;UBERON:0001016,1.42e-15,75;UBERON:0004111,1.52e-14,122;UBERON:0000955,2.66e-14,47;UBERON:0006238,2.66e-14,47;UBERON:0002616,2.00e-13,46;UBERON:0004121,1.76e-12,95;UBERON:0000924,1.76e-12,95;UBERON:0006601,1.76e-12,95;UBERON:0010371,1.86e-12,73;UBERON:0002021,3.38e-12,10;UBERON:0000411,3.38e-12,10;UBERON:0001950,3.38e-12,10;UBERON:0002020,1.05e-11,34;UBERON:0003076,2.88e-10,12;UBERON:0003057,2.88e-10,12;UBERON:0003080,1.80e-09,40;UBERON:0003056,2.96e-09,49;UBERON:0010314,3.02e-09,92;UBERON:0003528,5.77e-09,29;UBERON:0002791,5.77e-09,29;UBERON:0001893,5.77e-09,29;UBERON:0002780,1.36e-08,39;UBERON:0001890,1.36e-08,39;UBERON:0006240,1.36e-08,39;UBERON:0002048,8.98e-08,14;UBERON:0000117,8.98e-08,14;UBERON:0000171,8.98e-08,14;UBERON:0000170,8.98e-08,14;UBERON:0005597,8.98e-08,14;UBERON:0000118,8.98e-08,14;UBERON:0002619,1.04e-07,17;UBERON:0000956,4.91e-07,21;UBERON:0001869,4.91e-07,21;UBERON:0000203,4.91e-07,21;UBERON:0002950,6.72e-07,4;UBERON:0001891,6.72e-07,4;UBERON:0009616,6.72e-07,4;UBERON:0010286,6.72e-07,4;UBERON:0000483,8.45e-07,174
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.01376931219515,1.10128051297009,1.56478268869608,0.218025156380447,0.439372365468944,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,9.99778445413313,8.1721360152097,0,0,0.919218786610021,17.6185409599022,14.939418555967,23.8090126547177,0.131886287730194,0,0,19.821992929098,11.2552522006336,12.9878510610289,1.47314292736834,1.56608848879013,0,0,0,0,0,0,0,0,0,0.983110940922263,1.70430322578058,1.03914401841148,1.7666978725517,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,3.47038456607788,0,0.161766849947409,0.441683036920787,0,0,7.31951992528868,9.63454851341893,0,0,0,0,19.6225737620318,21.0450277296568,0.125654352112864,9.73416193076748,7.41574826257959,23.0644729461112,23.6872244078926,1.42575109390443,0.248813941220186,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.30140963567143,0.884474488967262,0.640568601424249,1.21812241927647,3.62184719034622,0,0,0.175951124163949,0,0.278047249225598,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0,0,0.900310307305074,0.473489471170421,0.393528463494808,0.617068451549513,0.697601834251224,0.536546802799238,0.233530684734339,0.987359099480883,0.820837320395476,0.810688095458557,0.146199987425332,0.219550115291051,1.07365135008297,11.565947171027,0.720332286654991,0,0,0.426576501070468,1.16118335930219,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,10.1614254591633,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,1.00503754465089,1.90434912708811,2.73187107000918,7.56648691709717,8.858587585951,5.26200736569707,6.55453258862952,7.7708241839653,7.66640010482011,0,0,0,0,48.3257275863254,46.5330395771047,2.45902418065013,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,6.74774764485795,1.84522110770749,1.6025904330053,2.44330439030364,2.3095817216155,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0,0.291480836629851,53.5879122810373,0,0.619160603889667,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0.954670618015114,0.632671987162271,1.62655573701479,0.540026704109006,0.418176592028937,0.218362563746178,0,0.991841468704031,1.04702376793612,0.129614973291793,0,0,1.19613236835183,0.827292452285488,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.13020438484395,0.209718688851422,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,1.73870634628971,0,1.28206136987086,0.643105137237198,0,9.03602948187307,11.0478056761722,5.72895513439397,3.26521046453006,6.85082519770642,7.55393897389701,3.37511250115903,6.30449684513909,2.71885445390523,3.62432218226274,0,0.798049746802062,0.341467211508268,0.243106717068294,0,0.183843508450014,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.320125762024346,0.459483751644906,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.338458431566706,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.01376931219515,1.10128051297009,1.56478268869608,0.218025156380447,0.439372365468944,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,9.99778445413313,8.1721360152097,0,0,0.919218786610021,17.6185409599022,14.939418555967,23.8090126547177,0.131886287730194,0,0,19.821992929098,11.2552522006336,12.9878510610289,1.47314292736834,1.56608848879013,0,0,0,0,0,0,0,0,0,0.983110940922263,1.70430322578058,1.03914401841148,1.7666978725517,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,3.47038456607788,0,0.161766849947409,0.441683036920787,0,0,7.31951992528868,9.63454851341893,0,0,0,0,19.6225737620318,21.0450277296568,0.125654352112864,9.73416193076748,7.41574826257959,23.0644729461112,23.6872244078926,1.42575109390443,0.248813941220186,0,1.47309299120532,0.130120442962704,0,0.180062129805349,0.30140963567143,0.884474488967262,0.640568601424249,1.21812241927647,3.62184719034622,0,0,0.175951124163949,0,0.278047249225598,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0,0,0.900310307305074,0.473489471170421,0.393528463494808,0.617068451549513,0.697601834251224,0.536546802799238,0.233530684734339,0.987359099480883,0.820837320395476,0.810688095458557,0.146199987425332,0.219550115291051,1.07365135008297,11.565947171027,0.720332286654991,0,0,0.426576501070468,1.16118335930219,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,10.1614254591633,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,1.00503754465089,1.90434912708811,2.73187107000918,7.56648691709717,8.858587585951,5.26200736569707,6.55453258862952,7.7708241839653,7.66640010482011,0,0,0,0,48.3257275863254,46.5330395771047,2.45902418065013,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,6.74774764485795,1.84522110770749,1.6025904330053,2.44330439030364,2.3095817216155,0,0.242780636154981,0.906970670894253,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0,0.291480836629851,53.5879122810373,0,0.619160603889667,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0.954670618015114,0.632671987162271,1.62655573701479,0.540026704109006,0.418176592028937,0.218362563746178,0,0.991841468704031,1.04702376793612,0.129614973291793,0,0,1.19613236835183,0.827292452285488,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.13020438484395,0.209718688851422,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,1.73870634628971,0,1.28206136987086,0.643105137237198,0,9.03602948187307,11.0478056761722,5.72895513439397,3.26521046453006,6.85082519770642,7.55393897389701,3.37511250115903,6.30449684513909,2.71885445390523,3.62432218226274,0,0.798049746802062,0.341467211508268,0.243106717068294,0,0.183843508450014,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.320125762024346,0.459483751644906,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.338458431566706,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p3@Phactr1
|short_description=p3@Phactr1
}}
}}

Latest revision as of 15:10, 1 October 2015

Short description:p3@Phactr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Phactr1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 13bp_to_ENSMUST00000127859_5end
EntrezGene:Phactr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Phactr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.62
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B223.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C77.77
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C248.33
medulla oblongata, neonate N30.CNhs11200.1396-42A346.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C953.59
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.30e-1954
neural tube1.93e-1752
neural rod1.93e-1752
future spinal cord1.93e-1752
neural keel1.93e-1752
central nervous system2.68e-1673
tube1.35e-15114
neurectoderm1.36e-1564
neural plate1.36e-1564
presumptive neural plate1.36e-1564
nervous system1.42e-1575
anatomical conduit1.52e-14122
brain2.66e-1447
future brain2.66e-1447
regional part of brain2.00e-1346
ectoderm-derived structure1.76e-1295
ectoderm1.76e-1295
presumptive ectoderm1.76e-1295
ecto-epithelium1.86e-1273
occipital lobe3.38e-1210
visual cortex3.38e-1210
neocortex3.38e-1210
gray matter1.05e-1134
posterior neural tube2.88e-1012
chordal neural plate2.88e-1012
anterior neural tube1.80e-0940
pre-chordal neural plate2.96e-0949
structure with developmental contribution from neural crest3.02e-0992
brain grey matter5.77e-0929
regional part of telencephalon5.77e-0929
telencephalon5.77e-0929
regional part of forebrain1.36e-0839
forebrain1.36e-0839
future forebrain1.36e-0839
lung8.98e-0814
respiratory tube8.98e-0814
respiration organ8.98e-0814
pair of lungs8.98e-0814
lung primordium8.98e-0814
lung bud8.98e-0814
regional part of cerebral cortex1.04e-0717
cerebral cortex4.91e-0721
cerebral hemisphere4.91e-0721
pallium4.91e-0721
regional part of midbrain6.72e-074
midbrain6.72e-074
presumptive midbrain6.72e-074
midbrain neural tube6.72e-074
epithelium8.45e-07174
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