FFCP PHASE1:Mm9::chr6:117123707..117123720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117123707..117123720,+ | |||
|description=CAGE_peak_at_chr6:117123707..117123720,+ | |description=CAGE_peak_at_chr6:117123707..117123720,+ | ||
|id=chr6:117123707..117123720,+ | |id=chr6:117123707..117123720,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.94e-30,3;CL:0000359,8.94e-30,3;CL:0002539,8.94e-30,3;CL:0000514,8.94e-30,3;CL:0000680,2.80e-15,6;CL:0000187,2.80e-15,6;CL:0000056,2.80e-15,6;CL:0000222,3.39e-13,7;CL:0000355,2.07e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.94e-30,3;UBERON:0004237,8.94e-30,3;UBERON:0004695,8.94e-30,3;UBERON:0002111,8.94e-30,3;UBERON:0004178,8.94e-30,3;UBERON:0000947,1.54e-22,4;UBERON:0001637,1.54e-22,4;UBERON:0004573,1.54e-22,4;UBERON:0003509,1.54e-22,4;UBERON:0004571,1.54e-22,4;UBERON:0010191,1.54e-22,4;UBERON:0004572,1.54e-22,4;UBERON:0000055,3.46e-18,5;UBERON:0007500,3.46e-18,5;UBERON:0001981,3.46e-18,5;UBERON:0002049,3.46e-18,5;UBERON:0007798,3.46e-18,5;UBERON:0004537,3.46e-18,5;UBERON:0006965,3.46e-18,5;UBERON:0001134,2.07e-10,9;UBERON:0002036,2.07e-10,9;UBERON:0002385,2.07e-10,9;UBERON:0000486,2.07e-10,9;UBERON:0007503,2.07e-10,9;UBERON:0001015,2.07e-10,9;UBERON:0002329,2.07e-10,9;UBERON:0003082,2.07e-10,9;UBERON:0003059,2.07e-10,9;UBERON:0007282,2.07e-10,9;UBERON:0004290,2.07e-10,9;UBERON:0009618,2.07e-10,9;UBERON:0000383,1.97e-09,10;UBERON:0007524,1.25e-08,11;UBERON:0003077,1.25e-08,11;UBERON:0007285,1.25e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79842817068117,5.37297735463427,6.60768307782054,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,1.07940638327563,0.649776417447669,0,0,11.759692257886,20.2633083590238,11.6602059588412,0,2.56652954828636,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0,0,0,0.581857461502877,0.0701358198903186,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0.555583582109135,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.992750942742586,0.194451188344048,0.129159823477731,0.506868376472335,0.821500670520278,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79842817068117,5.37297735463427,6.60768307782054,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,1.07940638327563,0.649776417447669,0,0,11.759692257886,20.2633083590238,11.6602059588412,0,2.56652954828636,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0,0,0,0.581857461502877,0.0701358198903186,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0.555583582109135,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.992750942742586,0.194451188344048,0.129159823477731,0.506868376472335,0.821500670520278,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr6:117123707..117123720,+ | |short_description=p@chr6:117123707..117123720,+ | ||
}} | }} |
Latest revision as of 23:34, 4 August 2015
Short description: | p@chr6:117123707..117123720, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117123707..117123720, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.94e-30 | 3 |
vascular associated smooth muscle cell | 8.94e-30 | 3 |
aortic smooth muscle cell | 8.94e-30 | 3 |
smooth muscle myoblast | 8.94e-30 | 3 |
muscle precursor cell | 2.80e-15 | 6 |
muscle cell | 2.80e-15 | 6 |
myoblast | 2.80e-15 | 6 |
mesodermal cell | 3.39e-13 | 7 |
multi-potent skeletal muscle stem cell | 2.07e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 8.94e-30 | 3 |
blood vessel smooth muscle | 8.94e-30 | 3 |
arterial system smooth muscle | 8.94e-30 | 3 |
artery smooth muscle tissue | 8.94e-30 | 3 |
aorta smooth muscle tissue | 8.94e-30 | 3 |
aorta | 1.54e-22 | 4 |
artery | 1.54e-22 | 4 |
systemic artery | 1.54e-22 | 4 |
arterial blood vessel | 1.54e-22 | 4 |
systemic arterial system | 1.54e-22 | 4 |
aortic system | 1.54e-22 | 4 |
arterial system | 1.54e-22 | 4 |
vessel | 3.46e-18 | 5 |
epithelial tube open at both ends | 3.46e-18 | 5 |
blood vessel | 3.46e-18 | 5 |
vasculature | 3.46e-18 | 5 |
vascular system | 3.46e-18 | 5 |
blood vasculature | 3.46e-18 | 5 |
vascular cord | 3.46e-18 | 5 |
skeletal muscle tissue | 2.07e-10 | 9 |
striated muscle tissue | 2.07e-10 | 9 |
muscle tissue | 2.07e-10 | 9 |
multilaminar epithelium | 2.07e-10 | 9 |
epithelial vesicle | 2.07e-10 | 9 |
musculature | 2.07e-10 | 9 |
somite | 2.07e-10 | 9 |
myotome | 2.07e-10 | 9 |
presomitic mesoderm | 2.07e-10 | 9 |
presumptive segmental plate | 2.07e-10 | 9 |
dermomyotome | 2.07e-10 | 9 |
trunk paraxial mesoderm | 2.07e-10 | 9 |
musculature of body | 1.97e-09 | 10 |
dense mesenchyme tissue | 1.25e-08 | 11 |
paraxial mesoderm | 1.25e-08 | 11 |
presumptive paraxial mesoderm | 1.25e-08 | 11 |