FFCP PHASE1:Mm9::chr6:117123510..117123523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117123510..117123523,+ | |||
|description=CAGE_peak_at_chr6:117123510..117123523,+ | |description=CAGE_peak_at_chr6:117123510..117123523,+ | ||
|id=chr6:117123510..117123523,+ | |id=chr6:117123510..117123523,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.44e-21,3;CL:0000192,2.93e-20,3;CL:0000359,2.93e-20,3;CL:0002539,2.93e-20,3;CL:0000514,2.93e-20,3;CL:0000680,1.88e-10,6;CL:0000187,1.88e-10,6;CL:0000056,1.88e-10,6;CL:0000222,4.84e-09,7;CL:0000355,3.77e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.17e-07!193;UBERON:0004120!1.17e-07!193;UBERON:0006603!1.17e-07!193;UBERON:0003914!1.35e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.93e-20,3;UBERON:0004237,2.93e-20,3;UBERON:0004695,2.93e-20,3;UBERON:0002111,2.93e-20,3;UBERON:0004178,2.93e-20,3;UBERON:0000947,2.28e-15,4;UBERON:0001637,2.28e-15,4;UBERON:0004573,2.28e-15,4;UBERON:0003509,2.28e-15,4;UBERON:0004571,2.28e-15,4;UBERON:0010191,2.28e-15,4;UBERON:0004572,2.28e-15,4;UBERON:0000055,2.01e-12,5;UBERON:0007500,2.01e-12,5;UBERON:0001981,2.01e-12,5;UBERON:0002049,2.01e-12,5;UBERON:0007798,2.01e-12,5;UBERON:0004537,2.01e-12,5;UBERON:0006965,2.01e-12,5;UBERON:0001153,5.62e-08,1;UBERON:0001045,5.62e-08,1;UBERON:0001134,3.77e-07,9;UBERON:0002036,3.77e-07,9;UBERON:0002385,3.77e-07,9;UBERON:0000486,3.77e-07,9;UBERON:0007503,3.77e-07,9;UBERON:0001015,3.77e-07,9;UBERON:0002329,3.77e-07,9;UBERON:0003082,3.77e-07,9;UBERON:0003059,3.77e-07,9;UBERON:0007282,3.77e-07,9;UBERON:0004290,3.77e-07,9;UBERON:0009618,3.77e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.31790010585369,2.0190142737785,1.56478268869608,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0,11.4188316127299,11.950156211732,10.2468476607999,0,7.69958864485907,2.54805239706646,7.11066703153331,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0,0.0701358198903186,0,0.442830443938806,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,5.75072826109418,0.372140947668503,0.936113019343682,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.863424909329478,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,1.48155621895769,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.31790010585369,2.0190142737785,1.56478268869608,0,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0,11.4188316127299,11.950156211732,10.2468476607999,0,7.69958864485907,2.54805239706646,7.11066703153331,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0,0.0701358198903186,0,0.442830443938806,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,5.75072826109418,0.372140947668503,0.936113019343682,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.863424909329478,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,1.48155621895769,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p@chr6:117123510..117123523,+ | |short_description=p@chr6:117123510..117123523,+ | ||
}} | }} |
Latest revision as of 23:31, 4 August 2015
Short description: | p@chr6:117123510..117123523, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117123510..117123523, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.44e-21 | 3 |
smooth muscle cell | 2.93e-20 | 3 |
vascular associated smooth muscle cell | 2.93e-20 | 3 |
aortic smooth muscle cell | 2.93e-20 | 3 |
smooth muscle myoblast | 2.93e-20 | 3 |
muscle precursor cell | 1.88e-10 | 6 |
muscle cell | 1.88e-10 | 6 |
myoblast | 1.88e-10 | 6 |
mesodermal cell | 4.84e-09 | 7 |
multi-potent skeletal muscle stem cell | 3.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.93e-20 | 3 |
blood vessel smooth muscle | 2.93e-20 | 3 |
arterial system smooth muscle | 2.93e-20 | 3 |
artery smooth muscle tissue | 2.93e-20 | 3 |
aorta smooth muscle tissue | 2.93e-20 | 3 |
aorta | 2.28e-15 | 4 |
artery | 2.28e-15 | 4 |
systemic artery | 2.28e-15 | 4 |
arterial blood vessel | 2.28e-15 | 4 |
systemic arterial system | 2.28e-15 | 4 |
aortic system | 2.28e-15 | 4 |
arterial system | 2.28e-15 | 4 |
vessel | 2.01e-12 | 5 |
epithelial tube open at both ends | 2.01e-12 | 5 |
blood vessel | 2.01e-12 | 5 |
vasculature | 2.01e-12 | 5 |
vascular system | 2.01e-12 | 5 |
blood vasculature | 2.01e-12 | 5 |
vascular cord | 2.01e-12 | 5 |
caecum | 5.62e-08 | 1 |
midgut | 5.62e-08 | 1 |
skeletal muscle tissue | 3.77e-07 | 9 |
striated muscle tissue | 3.77e-07 | 9 |
muscle tissue | 3.77e-07 | 9 |
multilaminar epithelium | 3.77e-07 | 9 |
epithelial vesicle | 3.77e-07 | 9 |
musculature | 3.77e-07 | 9 |
somite | 3.77e-07 | 9 |
myotome | 3.77e-07 | 9 |
presomitic mesoderm | 3.77e-07 | 9 |
presumptive segmental plate | 3.77e-07 | 9 |
dermomyotome | 3.77e-07 | 9 |
trunk paraxial mesoderm | 3.77e-07 | 9 |