FFCP PHASE1:Mm9::chr3:19544467..19544474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381485 | |EntrezGene=381485 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8Y1 | |UniProt=G3X8Y1 | ||
|association_with_transcript=7bp_to_ENSMUST00000029139,NM_001081281,uc008orw.1_5end | |association_with_transcript=7bp_to_ENSMUST00000029139,NM_001081281,uc008orw.1_5end | ||
|cluster_id=chr3:19544467..19544474,+ | |||
|description=CAGE_peak_4_at_Trim55_5end | |description=CAGE_peak_4_at_Trim55_5end | ||
|id=chr3:19544467..19544474,+ | |id=chr3:19544467..19544474,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.31e-14!18;UBERON:0000948!1.31e-14!18;UBERON:0005498!1.31e-14!18;UBERON:0004140!1.31e-14!18;UBERON:0009881!1.31e-14!18;UBERON:0004141!1.31e-14!18;UBERON:0003084!1.31e-14!18;UBERON:0007005!1.31e-14!18;UBERON:0004139!1.31e-14!18;UBERON:0004291!1.31e-14!18;UBERON:0004535!4.53e-10!23;UBERON:0001009!4.53e-10!23;UBERON:0000026!4.07e-08!13;UBERON:0004708!4.07e-08!13;UBERON:0002101!4.07e-08!13;UBERON:0004357!4.07e-08!13;UBERON:0009872!4.07e-08!13;UBERON:0004347!4.07e-08!13;UBERON:0005732!4.07e-08!13;UBERON:0005733!4.07e-08!13;UBERON:0003102!4.57e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.63e-22,18;UBERON:0000948,1.63e-22,18;UBERON:0005498,1.63e-22,18;UBERON:0004140,1.63e-22,18;UBERON:0009881,1.63e-22,18;UBERON:0004141,1.63e-22,18;UBERON:0003084,1.63e-22,18;UBERON:0007005,1.63e-22,18;UBERON:0004139,1.63e-22,18;UBERON:0004291,1.63e-22,18;UBERON:0004535,1.52e-16,23;UBERON:0001009,1.52e-16,23;UBERON:0004872,4.20e-10,33;UBERON:0003103,1.14e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,1.61766849947409,1.98757366614354,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.640568601424249,0.187403449119458,0,0.215567992932842,0.945530400839096,1.40760899331159,1.53437012699302,0.834141747676794,1.0447564995665,1.23469281844766,0,0,0,0,16.7771875753757,8.91199027928165,9.7233513188948,15.1516630774535,11.6090896730968,12.3413690309903,17.9051137457814,14.2184902741798,10.8591768401468,6.25327429671226,8.04420573987567,4.2155780963845,5.4093995347373,3.29325172936576,1.74468344388483,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.32643988239339,0.814824882210129,0.169745085775188,0,1.17254380209271,0.238043640886014,0.585400943573396,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,5.55436039849621,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,2.13898427030833,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.59609949360412,1.36586884603307,1.45864030240976,0.838452650511929,0.551530525350042,1.55572709461131,1.64828045791115,1.60459604795908,1.76888048234658,2.78827229879264,1.69763707247469,1.40462261204824,2.36893063898016,1.60819313075717,1.42888107384922,1.15884325944855,0.77163688185482,2.47251540481984,1.61918812147837,1.37147700954166,1.59728225543404,2.86123427936785,1.88950341622027,1.59985946706062,1.52306294205018,2.19513567447327,0.789209134313529,1.90125759384206,0,1.42362021749009,1.28055827088233,0.818462086339379,2.32405261778949,0.578719832943424,0.749431733813838,1.87145286756327,1.93383948643468,1.72159498861959,2.42650561031467,2.78241402744506 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,1.61766849947409,1.98757366614354,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.640568601424249,0.187403449119458,0,0.215567992932842,0.945530400839096,1.40760899331159,1.53437012699302,0.834141747676794,1.0447564995665,1.23469281844766,0,0,0,0,16.7771875753757,8.91199027928165,9.7233513188948,15.1516630774535,11.6090896730968,12.3413690309903,17.9051137457814,14.2184902741798,10.8591768401468,6.25327429671226,8.04420573987567,4.2155780963845,5.4093995347373,3.29325172936576,1.74468344388483,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.32643988239339,0.814824882210129,0.169745085775188,0,1.17254380209271,0.238043640886014,0.585400943573396,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,5.55436039849621,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,2.13898427030833,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0,0,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.59609949360412,1.36586884603307,1.45864030240976,0.838452650511929,0.551530525350042,1.55572709461131,1.64828045791115,1.60459604795908,1.76888048234658,2.78827229879264,1.69763707247469,1.40462261204824,2.36893063898016,1.60819313075717,1.42888107384922,1.15884325944855,0.77163688185482,2.47251540481984,1.61918812147837,1.37147700954166,1.59728225543404,2.86123427936785,1.88950341622027,1.59985946706062,1.52306294205018,2.19513567447327,0.789209134313529,1.90125759384206,0,1.42362021749009,1.28055827088233,0.818462086339379,2.32405261778949,0.578719832943424,0.749431733813838,1.87145286756327,1.93383948643468,1.72159498861959,2.42650561031467,2.78241402744506 | ||
|short_description=p4@Trim55 | |short_description=p4@Trim55 | ||
}} | }} |
Latest revision as of 21:01, 1 October 2015
Short description: | p4@Trim55 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trim55_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | 7bp_to_ENSMUST00000029139, NM_001081281, uc008orw.1_5end |
EntrezGene: | Trim55 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.63e-22 | 18 |
heart | 1.63e-22 | 18 |
primitive heart tube | 1.63e-22 | 18 |
primary heart field | 1.63e-22 | 18 |
anterior lateral plate mesoderm | 1.63e-22 | 18 |
heart tube | 1.63e-22 | 18 |
heart primordium | 1.63e-22 | 18 |
cardiac mesoderm | 1.63e-22 | 18 |
cardiogenic plate | 1.63e-22 | 18 |
heart rudiment | 1.63e-22 | 18 |
cardiovascular system | 1.52e-16 | 23 |
circulatory system | 1.52e-16 | 23 |
splanchnic layer of lateral plate mesoderm | 4.20e-10 | 33 |
compound organ | 1.14e-07 | 43 |