FFCP PHASE1:Mm9::chr3:137530722..137530761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70604 | |EntrezGene=70604 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=663 | |||
|TSSclassifier=NA | |||
|UniProt=Q149L6 | |UniProt=Q149L6 | ||
|association_with_transcript=83bp_to_ENSMUST00000090178,NM_001033155,uc008rmq.2,uc008rmr.2_5end | |association_with_transcript=83bp_to_ENSMUST00000090178,NM_001033155,uc008rmq.2,uc008rmr.2_5end | ||
|cluster_id=chr3:137530722..137530761,+ | |||
|description=CAGE_peak_1_at_Dnajb14_5end | |description=CAGE_peak_1_at_Dnajb14_5end | ||
|id=chr3:137530722..137530761,+ | |id=chr3:137530722..137530761,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0004111!5.48e-09!122;UBERON:0000033!6.50e-09!63;UBERON:0002346!2.69e-08!71;UBERON:0003075!2.69e-08!71;UBERON:0007284!2.69e-08!71;UBERON:0000955!8.01e-08!50;UBERON:0006238!8.01e-08!50;UBERON:0000025!8.28e-08!114;UBERON:0001049!9.81e-08!52;UBERON:0005068!9.81e-08!52;UBERON:0006241!9.81e-08!52;UBERON:0007135!9.81e-08!52;UBERON:0001017!1.18e-07!73;UBERON:0005743!1.18e-07!73;UBERON:0002616!2.09e-07!49;UBERON:0000073!3.20e-07!75;UBERON:0001016!3.20e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.87e-09,92;UBERON:0004121,5.30e-09,95;UBERON:0000924,5.30e-09,95;UBERON:0006601,5.30e-09,95;UBERON:0004111,5.63e-09,122;UBERON:0000073,1.76e-08,54;UBERON:0010371,3.21e-08,73;UBERON:0000025,8.50e-08,114;UBERON:0001049,9.80e-08,52;UBERON:0005068,9.80e-08,52;UBERON:0006241,9.80e-08,52;UBERON:0007135,9.80e-08,52;UBERON:0001017,1.18e-07,73;UBERON:0001016,3.20e-07,75;UBERON:0002346,3.24e-07,64;UBERON:0003075,3.24e-07,64;UBERON:0007284,3.24e-07,64 | |||
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|phase1_expression=5.60520964866779,1.04692622291808,1.81999695755814,2.11724947914781,3.00537437967808,2.68606835059024,2.56973904655078,2.06597317506522,0.281577444303333,0.234064526321993,1.02730780935303,0.558405112967355,0.856003649656029,2.18551006047494,1.66554880907831,1.21485160433896,2.09868563438444,2.5236973228659,3.15363197293199,4.2438965179803,4.93251082876205,2.78014663362479,2.08959831311148,1.27993938234725,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,2.09025761402011,2.26827116783938,1.77384408524244,0,0.61506478758457,0,1.1554064790051,1.99481574430191,0.816677425049476,10.8818223991596,7.0320181007142,8.37637990358077,5.88231488031014,12.294818729252,10.6812277666854,5.91715044485213,7.80602370390262,3.30384153891027,4.69434806608824,3.92445281484804,3.95435128922049,3.88859798148567,2.51975558925653,8.62515386189829,1.00669563634642,0.725362142011344,1.34437519656986,4.63066984864705,2.86533439938757,3.6097046459421,6.47412674750713,5.81890077199236,5.07065122804943,6.09920157724438,3.55717918444456,5.84934816232909,5.93319817540185,2.8419204597844,5.69240209984969,4.2264013585371,4.25127410464758,3.78016627328734,2.73422449756797,5.14171771926846,4.8591079009355,2.9397791811589,2.01275489138296,2.75765635983006,6.60695285996332,12.3856717942632,12.9029487935245,5.01167893374737,4.11694396210843,3.12548022334056,8.65467296904281,11.2552522006336,10.0846843532695,9.1334861496837,9.5389026135399,6.15118171223492,3.63485727999283,3.24957708459178,8.69593466105033,8.60423876981386,4.0798280022465,1.61910957491345,5.19821133958135,6.2723764193627,4.77511028447956,4.09032774187339,3.37721805983729,4.94675404314476,7.04217098883402,2.56652954828636,12.7402619853323,0,1.29894624606728,1.26679932737549,2.02209778005913,3.76806803072898,3.6251303710604,10.5393918736026,3.29622120855658,5.48037860961854,5.5347719341454,6.78251882486802,5.05631440683531,8.92232798440696,4.94389935468748,8.53136205827479,7.07688441559899,5.82360659810673,4.19598885074748,5.81850303762267,0,12.5895742714965,8.79676168616511,2.81002760729451,1.31796636956512,0.599902730993408,1.65191295194984,13.9305294646485,10.5225138648284,2.89005009859588,15.2965401769203,11.7629110371952,12.0517065844545,10.2211995732687,7.63795228877372,5.22509276562391,10.3616330957807,5.6819301089348,3.513251959993,4.82794419310293,5.76198815377118,4.67184935290717,5.30684693380357,4.74020765053944,5.99691037182265,8.79591460512653,1.29340795759705,3.9712276835242,5.27853372491847,4.3839146485515,6.39508673218875,2.78601733217733,4.11564272815887,3.58261680273288,1.40442637462647,1.28673953557358,1.98914449576915,4.97101854085205,3.98694301967864,4.14142741360334,4.97163944728941,4.13204886669548,3.70241070929708,4.65067889500816,6.9751084363901,3.15266424391358,7.07607354627966,6.7308660272429,6.4044359541226,6.28659945928929,6.58650345873152,6.57611451925822,11.3556572224629,5.86556290561921,2.64335026387038,3.96675849995316,2.98603550749328,3.94802342162745,4.76809606891745,4.03367049246685,3.11329261382818,4.1849637744763,2.37264530772256,1.81168850196412,4.02136334080431,4.77495532898762,6.04388670069272,3.59527763461689,3.8904848977445,2.98711909881551,2.84501851429623,4.91268604221834,4.50830942692322,6.10953983535943,5.43066964069352,5.96154469067708,7.58838445491087,6.9376769550413,6.75094529717912,5.92306386824642,5.33614728756868,0.83422552858047,3.14494392181125,1.79889689907883,2.63718157805054,2.17059443777175,2.80088436959562,4.02774592431135,3.24270453550071,3.29473695825698,14.3768206527355,4.83783231969054,4.36852742360385,4.04126204715379,3.76734568396016,2.8946611281802,7.57488079683079,3.7898282354097,4.23708938749267,2.54617628662782,3.28566347603903,5.52770649557992,3.80869825417622,5.26860849216057,6.14777062014145,5.97954662051692,8.92946704481928,3.4411296090305,5.35323443784276,6.07526046042349,1.50791283939272,3.26343410291226,3.93411418415229,6.34654516500885,12.8440471990234,15.2375192569864,4.42624352517024,7.32165688892682,2.52406575533005,3.51394869866975,2.36965737506079,4.06246956519338,2.89638276307112,5.37845408498782,2.83367491172426,3.21481443702443,4.34816555741176,9.63963949265421,5.67760340833074,6.94455854302295,6.8412522928502,8.57844639457184,3.98235415019888,1.45668381692989,3.93020624054176,3.39489143560617,2.95301892880773,5.53383266299069,4.39328098385976,7.99774204850512,7.48644494607915,8.21695570633122,3.16255825724996,7.21948802737308,7.48967132658334,4.86164953884538,2.32845630808958,5.14408884075822,4.61084607469911,3.38900753443934,4.27827453565514,3.04464949114599,7.74416636610244,9.53244318887191,8.15955072803359,6.10079135883476,4.68246837418126,5.66941494324665,5.01363844813173,5.58079059133208,3.20628920292836,14.0923229527987,3.07567585436135,5.36605856704379,3.51869602002452,2.63715839806567,2.05041341581538,1.83022538565218,2.20971958992012,1.95932033253121,2.3493995546752,2.86401185404534,2.21435195506795,5.69294507955176,4.10420295122845,3.55450103224597,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| ||
|short_description=p1@Dnajb14 | |short_description=p1@Dnajb14 | ||
}} | }} |
Latest revision as of 16:29, 1 October 2015
Short description: | p1@Dnajb14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajb14_5end |
Coexpression cluster: | MCL_coexpression_mm9:663 |
Association with transcript: | 83bp_to_ENSMUST00000090178, NM_001033155, uc008rmq.2, uc008rmr.2_5end |
EntrezGene: | Dnajb14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.87e-09 | 92 |
ectoderm-derived structure | 5.30e-09 | 95 |
ectoderm | 5.30e-09 | 95 |
presumptive ectoderm | 5.30e-09 | 95 |
anatomical conduit | 5.63e-09 | 122 |
regional part of nervous system | 1.76e-08 | 54 |
ecto-epithelium | 3.21e-08 | 73 |
tube | 8.50e-08 | 114 |
neural tube | 9.80e-08 | 52 |
neural rod | 9.80e-08 | 52 |
future spinal cord | 9.80e-08 | 52 |
neural keel | 9.80e-08 | 52 |
central nervous system | 1.18e-07 | 73 |
nervous system | 3.20e-07 | 75 |
neurectoderm | 3.24e-07 | 64 |
neural plate | 3.24e-07 | 64 |
presumptive neural plate | 3.24e-07 | 64 |