FFCP PHASE1:Mm9::chr13:115891925..115891952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109700 | |EntrezGene=109700 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2819 | |||
|TSSclassifier=NA | |||
|UniProt=Q3URV2 | |UniProt=Q3URV2 | ||
|association_with_transcript=186bp_to_ENSMUST00000036276_5end | |association_with_transcript=186bp_to_ENSMUST00000036276_5end | ||
|cluster_id=chr13:115891925..115891952,- | |||
|description=CAGE_peak_4_at_Itga1_5end | |description=CAGE_peak_4_at_Itga1_5end | ||
|id=chr13:115891925..115891952,- | |id=chr13:115891925..115891952,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.77e-10!66;UBERON:0003914!1.49e-09!47;UBERON:0004872!7.27e-09!33;UBERON:0002048!2.11e-08!14;UBERON:0000117!2.11e-08!14;UBERON:0000171!2.11e-08!14;UBERON:0000170!2.11e-08!14;UBERON:0005597!2.11e-08!14;UBERON:0000118!2.11e-08!14;UBERON:0005177!3.45e-08!85;UBERON:0002100!5.20e-08!98;UBERON:0005153!6.61e-08!17;UBERON:0004921!1.10e-07!126;UBERON:0004185!1.10e-07!126;UBERON:0004119!1.24e-07!130;UBERON:0000925!1.24e-07!130;UBERON:0006595!1.24e-07!130;UBERON:0003104!1.70e-07!131;UBERON:0009142!1.70e-07!131;UBERON:0001007!2.39e-07!128;UBERON:0001555!2.39e-07!128;UBERON:0007026!2.39e-07!128;UBERON:0004535!2.39e-07!23;UBERON:0001009!2.39e-07!23;UBERON:0000468!3.22e-07!333 | |ontology_enrichment_uberon=UBERON:0009569!4.77e-10!66;UBERON:0003914!1.49e-09!47;UBERON:0004872!7.27e-09!33;UBERON:0002048!2.11e-08!14;UBERON:0000117!2.11e-08!14;UBERON:0000171!2.11e-08!14;UBERON:0000170!2.11e-08!14;UBERON:0005597!2.11e-08!14;UBERON:0000118!2.11e-08!14;UBERON:0005177!3.45e-08!85;UBERON:0002100!5.20e-08!98;UBERON:0005153!6.61e-08!17;UBERON:0004921!1.10e-07!126;UBERON:0004185!1.10e-07!126;UBERON:0004119!1.24e-07!130;UBERON:0000925!1.24e-07!130;UBERON:0006595!1.24e-07!130;UBERON:0003104!1.70e-07!131;UBERON:0009142!1.70e-07!131;UBERON:0001007!2.39e-07!128;UBERON:0001555!2.39e-07!128;UBERON:0007026!2.39e-07!128;UBERON:0004535!2.39e-07!23;UBERON:0001009!2.39e-07!23;UBERON:0000468!3.22e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,7.30e-11,66;UBERON:0002100,1.24e-10,90;UBERON:0005177,1.36e-10,79;UBERON:0005157,8.43e-10,20;UBERON:0003914,1.11e-09,47;UBERON:0004872,1.39e-09,33;UBERON:0002048,4.46e-09,14;UBERON:0000117,4.46e-09,14;UBERON:0000171,4.46e-09,14;UBERON:0000170,4.46e-09,14;UBERON:0005597,4.46e-09,14;UBERON:0000118,4.46e-09,14;UBERON:0005153,1.57e-08,17;UBERON:0004535,6.41e-08,23;UBERON:0001009,6.41e-08,23;UBERON:0004921,7.65e-08,114;UBERON:0004119,1.41e-07,118;UBERON:0000925,1.41e-07,118;UBERON:0006595,1.41e-07,118;UBERON:0001007,2.80e-07,116;UBERON:0001555,2.80e-07,116;UBERON:0007026,2.80e-07,116;UBERON:0007100,4.09e-07,18;UBERON:0000948,4.09e-07,18;UBERON:0005498,4.09e-07,18;UBERON:0004140,4.09e-07,18;UBERON:0009881,4.09e-07,18;UBERON:0004141,4.09e-07,18;UBERON:0003084,4.09e-07,18;UBERON:0007005,4.09e-07,18;UBERON:0004139,4.09e-07,18;UBERON:0004291,4.09e-07,18 | |||
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| ||
|short_description=p4@Itga1 | |short_description=p4@Itga1 | ||
}} | }} |
Latest revision as of 03:37, 27 September 2015
Short description: | p4@Itga1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Itga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2819 |
Association with transcript: | 186bp_to_ENSMUST00000036276_5end |
EntrezGene: | Itga1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 7.30e-11 | 66 |
trunk | 1.24e-10 | 90 |
trunk region element | 1.36e-10 | 79 |
epithelial fold | 8.43e-10 | 20 |
epithelial tube | 1.11e-09 | 47 |
splanchnic layer of lateral plate mesoderm | 1.39e-09 | 33 |
lung | 4.46e-09 | 14 |
respiratory tube | 4.46e-09 | 14 |
respiration organ | 4.46e-09 | 14 |
pair of lungs | 4.46e-09 | 14 |
lung primordium | 4.46e-09 | 14 |
lung bud | 4.46e-09 | 14 |
epithelial bud | 1.57e-08 | 17 |
cardiovascular system | 6.41e-08 | 23 |
circulatory system | 6.41e-08 | 23 |
subdivision of digestive tract | 7.65e-08 | 114 |
endoderm-derived structure | 1.41e-07 | 118 |
endoderm | 1.41e-07 | 118 |
presumptive endoderm | 1.41e-07 | 118 |
digestive system | 2.80e-07 | 116 |
digestive tract | 2.80e-07 | 116 |
primitive gut | 2.80e-07 | 116 |
primary circulatory organ | 4.09e-07 | 18 |
heart | 4.09e-07 | 18 |
primitive heart tube | 4.09e-07 | 18 |
primary heart field | 4.09e-07 | 18 |
anterior lateral plate mesoderm | 4.09e-07 | 18 |
heart tube | 4.09e-07 | 18 |
heart primordium | 4.09e-07 | 18 |
cardiac mesoderm | 4.09e-07 | 18 |
cardiogenic plate | 4.09e-07 | 18 |
heart rudiment | 4.09e-07 | 18 |