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FFCP PHASE1:Mm9::chr3:13471637..13471733,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76897
|EntrezGene=76897
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BTF8
|UniProt=Q8BTF8
|association_with_transcript=0bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2,uc008oqd.2_5end
|association_with_transcript=0bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2,uc008oqd.2_5end
|cluster_id=chr3:13471637..13471733,+
|description=CAGE_peak_1_at_Ralyl_5end
|description=CAGE_peak_1_at_Ralyl_5end
|id=chr3:13471637..13471733,+
|id=chr3:13471637..13471733,+
|ontology_enrichment_celltype=CL:0000540!6.62e-19!33;CL:0000047!6.62e-19!33;CL:0000031!6.62e-19!33;CL:0000404!6.62e-19!33;CL:0000117!1.38e-14!23;CL:0000337!1.38e-14!23;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0002319!3.92e-12!43;CL:0000055!2.62e-08!50
|ontology_enrichment_celltype=CL:0000540!6.62e-19!33;CL:0000047!6.62e-19!33;CL:0000031!6.62e-19!33;CL:0000404!6.62e-19!33;CL:0000117!1.38e-14!23;CL:0000337!1.38e-14!23;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0002319!3.92e-12!43;CL:0000055!2.62e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.84e-24,33;CL:0000047,5.84e-24,33;CL:0000031,5.84e-24,33;CL:0000404,5.84e-24,33;CL:0000117,2.23e-18,23;CL:0000337,2.23e-18,23;CL:0000393,2.79e-18,39;CL:0000211,2.79e-18,39;CL:0002319,2.85e-16,43;CL:0000221,1.29e-15,44;CL:0000133,1.29e-15,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.58e-30!75;UBERON:0001016!2.58e-30!75;UBERON:0001017!4.10e-30!73;UBERON:0005743!4.10e-30!73;UBERON:0002346!6.02e-28!71;UBERON:0003075!6.02e-28!71;UBERON:0007284!6.02e-28!71;UBERON:0004121!2.50e-27!102;UBERON:0000924!2.50e-27!102;UBERON:0006601!2.50e-27!102;UBERON:0001049!1.82e-23!52;UBERON:0005068!1.82e-23!52;UBERON:0006241!1.82e-23!52;UBERON:0007135!1.82e-23!52;UBERON:0000033!2.07e-23!63;UBERON:0000955!3.16e-22!50;UBERON:0006238!3.16e-22!50;UBERON:0002616!1.20e-21!49;UBERON:0003056!6.00e-21!49;UBERON:0002020!3.37e-19!34;UBERON:0003080!1.47e-18!40;UBERON:0002780!7.03e-18!39;UBERON:0001890!7.03e-18!39;UBERON:0006240!7.03e-18!39;UBERON:0002791!6.07e-16!29;UBERON:0003528!6.07e-16!29;UBERON:0001893!6.07e-16!29;UBERON:0007811!1.42e-12!86;UBERON:0000153!8.15e-12!94;UBERON:0000956!3.00e-11!21;UBERON:0001869!3.00e-11!21;UBERON:0000203!3.00e-11!21;UBERON:0002021!3.45e-09!10;UBERON:0000411!3.45e-09!10;UBERON:0001950!3.45e-09!10;UBERON:0002619!3.63e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-38,73;UBERON:0001016,1.17e-37,75;UBERON:0002346,3.06e-33,64;UBERON:0003075,3.06e-33,64;UBERON:0007284,3.06e-33,64;UBERON:0004121,5.75e-33,95;UBERON:0000924,5.75e-33,95;UBERON:0006601,5.75e-33,95;UBERON:0000073,1.37e-30,54;UBERON:0001049,1.54e-28,52;UBERON:0005068,1.54e-28,52;UBERON:0006241,1.54e-28,52;UBERON:0007135,1.54e-28,52;UBERON:0010371,1.77e-27,73;UBERON:0002020,5.88e-25,34;UBERON:0000955,3.95e-24,47;UBERON:0006238,3.95e-24,47;UBERON:0003056,6.83e-24,49;UBERON:0002616,2.10e-23,46;UBERON:0003080,1.14e-21,40;UBERON:0002780,8.23e-21,39;UBERON:0001890,8.23e-21,39;UBERON:0006240,8.23e-21,39;UBERON:0003528,9.90e-21,29;UBERON:0002791,9.90e-21,29;UBERON:0001893,9.90e-21,29;UBERON:0010314,2.89e-18,92;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0002619,6.03e-12,17;UBERON:0002021,2.08e-11,10;UBERON:0000411,2.08e-11,10;UBERON:0001950,2.08e-11,10;UBERON:0003076,2.68e-07,12;UBERON:0003057,2.68e-07,12;UBERON:0002420,2.86e-07,8;UBERON:0007245,2.86e-07,8;UBERON:0010009,2.86e-07,8;UBERON:0010011,2.86e-07,8;UBERON:0000454,2.86e-07,8
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.18467533631554,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3243045203437,34.3844136526821,45.0020296489387,0,0,0,0,0,0,0,10.3689612308478,8.50537411489651,9.88527318351495,28.2794474559766,26.7250934551452,7.22695715368229,4.60058260887535,17.4651569455904,64.9683697896393,49.2873125008825,44.3922881110544,26.3772575460388,20.4932321669398,26.045668527838,33.7811428791671,34.3285192119325,41.1027286519619,40.3641162098925,39.7216989429497,32.8063024652529,0.530083353332288,1.20914496170857,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,1.37020655662872,0.258937883647172,2.3750742250372,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0,0,0,0,71.4385144708175,86.7109366207704,0,0,0,0,38.9455662452539,19.6725259212009,11.4345460422707,64.14117415095,51.1430914660661,34.2850273523274,28.0677385107221,0.305518091550949,0,0.252722758433675,1.26265113531884,1.69156575851515,0.689706313300419,2.16074555766419,2.56198190320716,3.81004395247436,6.53379973452734,7.21503279109912,7.76110112217047,0,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,47.3152384269286,23.4622516224768,0,0,0.213288250535234,0.696710015581316,0.77320476793256,1.61346819698674,1.33426826306922,0.951128130562796,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,28.4174544278392,22.7390671988874,0,0,11.9893123378178,9.37052986311932,15.7259080344943,3.82350076724083,5.34716817797746,11.889214293131,9.71545684019746,19.2888866221466,21.7408277870588,18.6366363524648,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,0.900305470156551,0.129358683782755,0.428674070063185,2.83744373827638,2.49716344642899,5.10101963866575,1.522324745573,0,0,0.661585194164886,0,0.161464426695906,0,0,0,0,31.3368760397761,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,1.08005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6193021891989,95.2873239569856,97.3922372846974,181.992520101965,119.204358440092,129.927750351028,88.4279475303666,90.9648830512925,99.2381875675408,94.2323767388312,0.93408612825759,3.59122386060928,2.73173769206615,4.132814190161,4.40187641518763,6.43452279575049,4.00044110042907,2.88449080134452,4.49286893428541,4.29585259998456,4.81610669791456,3.01802146217722,4.68207537349412,4.48176066834085,5.05432126809397,8.57328644309533,5.2147946675185,5.78727661391115,5.35711671044299,3.23837624295674,4.4573002810104,5.6792257970988,5.24559617884106,3.34296758254356,4.14081273827455,4.48457421825885,4.75612729469209,6.05060336307039,5.02475221229689,5.05028044491965,5.21994079746366,4.53120618927592,4.50154147486658,6.04253680625267,3.85813221962283,7.99393849401427,4.91256377735358,4.08255002691767,0.382576664137687,0.661774257358546,2.08681052058379
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.18467533631554,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3243045203437,34.3844136526821,45.0020296489387,0,0,0,0,0,0,0,10.3689612308478,8.50537411489651,9.88527318351495,28.2794474559766,26.7250934551452,7.22695715368229,4.60058260887535,17.4651569455904,64.9683697896393,49.2873125008825,44.3922881110544,26.3772575460388,20.4932321669398,26.045668527838,33.7811428791671,34.3285192119325,41.1027286519619,40.3641162098925,39.7216989429497,32.8063024652529,0.530083353332288,1.20914496170857,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,1.37020655662872,0.258937883647172,2.3750742250372,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0,0,0,0,71.4385144708175,86.7109366207704,0,0,0,0,38.9455662452539,19.6725259212009,11.4345460422707,64.14117415095,51.1430914660661,34.2850273523274,28.0677385107221,0.305518091550949,0,0.252722758433675,1.26265113531884,1.69156575851515,0.689706313300419,2.16074555766419,2.56198190320716,3.81004395247436,6.53379973452734,7.21503279109912,7.76110112217047,0,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,47.3152384269286,23.4622516224768,0,0,0.213288250535234,0.696710015581316,0.77320476793256,1.61346819698674,1.33426826306922,0.951128130562796,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,28.4174544278392,22.7390671988874,0,0,11.9893123378178,9.37052986311932,15.7259080344943,3.82350076724083,5.34716817797746,11.889214293131,9.71545684019746,19.2888866221466,21.7408277870588,18.6366363524648,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,0.900305470156551,0.129358683782755,0.428674070063185,2.83744373827638,2.49716344642899,5.10101963866575,1.522324745573,0,0,0.661585194164886,0,0.161464426695906,0,0,0,0,31.3368760397761,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,1.08005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6193021891989,95.2873239569856,97.3922372846974,181.992520101965,119.204358440092,129.927750351028,88.4279475303666,90.9648830512925,99.2381875675408,94.2323767388312,0.93408612825759,3.59122386060928,2.73173769206615,4.132814190161,4.40187641518763,6.43452279575049,4.00044110042907,2.88449080134452,4.49286893428541,4.29585259998456,4.81610669791456,3.01802146217722,4.68207537349412,4.48176066834085,5.05432126809397,8.57328644309533,5.2147946675185,5.78727661391115,5.35711671044299,3.23837624295674,4.4573002810104,5.6792257970988,5.24559617884106,3.34296758254356,4.14081273827455,4.48457421825885,4.75612729469209,6.05060336307039,5.02475221229689,5.05028044491965,5.21994079746366,4.53120618927592,4.50154147486658,6.04253680625267,3.85813221962283,7.99393849401427,4.91256377735358,4.08255002691767,0.382576664137687,0.661774257358546,2.08681052058379
|short_description=p1@Ralyl
|short_description=p1@Ralyl
}}
}}

Latest revision as of 15:43, 1 October 2015

Short description:p1@Ralyl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ralyl_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_001163328, NM_178631, uc008oqb.2, uc008oqc.2, uc008oqd.2_5end
EntrezGene:Ralyl
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ralyl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C745.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D364.97
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.29
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.81
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B271.44
cerebellum, neonate N30.CNhs11135.1395-42I286.71
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A438.95
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D564.14
cortex, neonate N30.CNhs11107.1392-42F251.14
diencephalon, adult.CNhs10482.20-12F234.29
diencephalon, neonate N30.CNhs11201.1388-42B228.07
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E847.32
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C228.42
medulla oblongata, neonate N30.CNhs11200.1396-42A322.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.73
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C931.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A192.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A295.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A397.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7181.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5129.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A688.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A790.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A899.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A994.23
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.84e-2433
neuronal stem cell5.84e-2433
neuroblast5.84e-2433
electrically signaling cell5.84e-2433
CNS neuron (sensu Vertebrata)2.23e-1823
neuroblast (sensu Vertebrata)2.23e-1823
electrically responsive cell2.79e-1839
electrically active cell2.79e-1839
neural cell2.85e-1643
ectodermal cell1.29e-1544
neurectodermal cell1.29e-1544

Uber anatomy
Ontology termp-valuen
central nervous system2.88e-3873
nervous system1.17e-3775
neurectoderm3.06e-3364
neural plate3.06e-3364
presumptive neural plate3.06e-3364
ectoderm-derived structure5.75e-3395
ectoderm5.75e-3395
presumptive ectoderm5.75e-3395
regional part of nervous system1.37e-3054
neural tube1.54e-2852
neural rod1.54e-2852
future spinal cord1.54e-2852
neural keel1.54e-2852
ecto-epithelium1.77e-2773
gray matter5.88e-2534
brain3.95e-2447
future brain3.95e-2447
pre-chordal neural plate6.83e-2449
regional part of brain2.10e-2346
anterior neural tube1.14e-2140
regional part of forebrain8.23e-2139
forebrain8.23e-2139
future forebrain8.23e-2139
brain grey matter9.90e-2129
regional part of telencephalon9.90e-2129
telencephalon9.90e-2129
structure with developmental contribution from neural crest2.89e-1892
cerebral cortex1.22e-1421
cerebral hemisphere1.22e-1421
pallium1.22e-1421
regional part of cerebral cortex6.03e-1217
occipital lobe2.08e-1110
visual cortex2.08e-1110
neocortex2.08e-1110
posterior neural tube2.68e-0712
chordal neural plate2.68e-0712
basal ganglion2.86e-078
nuclear complex of neuraxis2.86e-078
aggregate regional part of brain2.86e-078
collection of basal ganglia2.86e-078
cerebral subcortex2.86e-078
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