FFCP PHASE1:Mm9::chr13:107737184..107737244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66254 | |EntrezGene=66254 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D0D4 | |UniProt=Q9D0D4 | ||
|association_with_transcript=0bp_to_ENSMUST00000022203,NM_025447,uc007rua.2_5end | |association_with_transcript=0bp_to_ENSMUST00000022203,NM_025447,uc007rua.2_5end | ||
|cluster_id=chr13:107737184..107737244,+ | |||
|description=CAGE_peak_1_at_Dimt1_5end | |description=CAGE_peak_1_at_Dimt1_5end | ||
|id=chr13:107737184..107737244,+ | |id=chr13:107737184..107737244,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.13e-09!33;CL:0000047!2.13e-09!33;CL:0000031!2.13e-09!33;CL:0000404!2.13e-09!33;CL:0000393!6.66e-09!39;CL:0000211!6.66e-09!39;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000084!2.14e-07!11;CL:0000827!2.14e-07!11;CL:0000838!2.56e-07!12;CL:0000034!2.65e-07!97;CL:0000791!6.22e-07!9;CL:0000789!6.22e-07!9;CL:0002420!6.22e-07!9;CL:0002419!6.22e-07!9;CL:0000790!6.22e-07!9 | |ontology_enrichment_celltype=CL:0000540!2.13e-09!33;CL:0000047!2.13e-09!33;CL:0000031!2.13e-09!33;CL:0000404!2.13e-09!33;CL:0000393!6.66e-09!39;CL:0000211!6.66e-09!39;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000084!2.14e-07!11;CL:0000827!2.14e-07!11;CL:0000838!2.56e-07!12;CL:0000034!2.65e-07!97;CL:0000791!6.22e-07!9;CL:0000789!6.22e-07!9;CL:0002420!6.22e-07!9;CL:0002419!6.22e-07!9;CL:0000790!6.22e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.13e-09,33;CL:0000047,2.13e-09,33;CL:0000031,2.13e-09,33;CL:0000404,2.13e-09,33;CL:0000393,6.66e-09,39;CL:0000211,6.66e-09,39;CL:0000542,1.08e-07,13;CL:0000051,1.08e-07,13;CL:0000084,2.14e-07,11;CL:0000827,2.14e-07,11;CL:0000838,2.56e-07,12;CL:0000034,2.65e-07,97;CL:0000791,6.22e-07,9;CL:0000789,6.22e-07,9;CL:0002420,6.22e-07,9;CL:0002419,6.22e-07,9;CL:0000790,6.22e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.02e-10!75;UBERON:0001016!8.02e-10!75;UBERON:0000153!1.17e-09!94;UBERON:0001017!2.14e-09!73;UBERON:0005743!2.14e-09!73;UBERON:0002020!2.53e-07!34;UBERON:0007811!2.83e-07!86;UBERON:0001049!8.20e-07!52;UBERON:0005068!8.20e-07!52;UBERON:0006241!8.20e-07!52;UBERON:0007135!8.20e-07!52 | |ontology_enrichment_uberon=UBERON:0000073!8.02e-10!75;UBERON:0001016!8.02e-10!75;UBERON:0000153!1.17e-09!94;UBERON:0001017!2.14e-09!73;UBERON:0005743!2.14e-09!73;UBERON:0002020!2.53e-07!34;UBERON:0007811!2.83e-07!86;UBERON:0001049!8.20e-07!52;UBERON:0005068!8.20e-07!52;UBERON:0006241!8.20e-07!52;UBERON:0007135!8.20e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.02e-10,75;UBERON:0001017,2.14e-09,73;UBERON:0002346,5.79e-08,64;UBERON:0003075,5.79e-08,64;UBERON:0007284,5.79e-08,64;UBERON:0002020,2.53e-07,34;UBERON:0000073,2.67e-07,54;UBERON:0004121,2.78e-07,95;UBERON:0000924,2.78e-07,95;UBERON:0006601,2.78e-07,95;UBERON:0001049,8.20e-07,52;UBERON:0005068,8.20e-07,52;UBERON:0006241,8.20e-07,52;UBERON:0007135,8.20e-07,52 | |||
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| ||
|short_description=p1@Dimt1 | |short_description=p1@Dimt1 | ||
}} | }} |
Latest revision as of 02:06, 27 September 2015
Short description: | p1@Dimt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dimt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000022203, NM_025447, uc007rua.2_5end |
EntrezGene: | Dimt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.13e-09 | 33 |
neuronal stem cell | 2.13e-09 | 33 |
neuroblast | 2.13e-09 | 33 |
electrically signaling cell | 2.13e-09 | 33 |
electrically responsive cell | 6.66e-09 | 39 |
electrically active cell | 6.66e-09 | 39 |
lymphocyte | 1.08e-07 | 13 |
common lymphoid progenitor | 1.08e-07 | 13 |
T cell | 2.14e-07 | 11 |
pro-T cell | 2.14e-07 | 11 |
lymphoid lineage restricted progenitor cell | 2.56e-07 | 12 |
stem cell | 2.65e-07 | 97 |
mature alpha-beta T cell | 6.22e-07 | 9 |
alpha-beta T cell | 6.22e-07 | 9 |
immature T cell | 6.22e-07 | 9 |
mature T cell | 6.22e-07 | 9 |
immature alpha-beta T cell | 6.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.02e-10 | 75 |
central nervous system | 2.14e-09 | 73 |
neurectoderm | 5.79e-08 | 64 |
neural plate | 5.79e-08 | 64 |
presumptive neural plate | 5.79e-08 | 64 |
gray matter | 2.53e-07 | 34 |
regional part of nervous system | 2.67e-07 | 54 |
ectoderm-derived structure | 2.78e-07 | 95 |
ectoderm | 2.78e-07 | 95 |
presumptive ectoderm | 2.78e-07 | 95 |
neural tube | 8.20e-07 | 52 |
neural rod | 8.20e-07 | 52 |
future spinal cord | 8.20e-07 | 52 |
neural keel | 8.20e-07 | 52 |