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FFCP PHASE1:Mm9::chr5:58109503..58109546,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54216
|EntrezGene=54216
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A2RS43,E9Q2S0,Q3TVS7,Q3USI1,Q8CA35,O88185
|UniProt=A2RS43,E9Q2S0,Q3TVS7,Q3USI1,Q8CA35,O88185
|association_with_transcript=243bp_to_ENSMUST00000068110,NM_001122758,NM_018764,uc008xlt.2,uc008xlu.2,uc008xlv.2_5end
|association_with_transcript=243bp_to_ENSMUST00000068110,NM_001122758,NM_018764,uc008xlt.2,uc008xlu.2,uc008xlv.2_5end
|cluster_id=chr5:58109503..58109546,+
|description=CAGE_peak_4_at_Pcdh7_5end
|description=CAGE_peak_4_at_Pcdh7_5end
|id=chr5:58109503..58109546,+
|id=chr5:58109503..58109546,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.98e-10!75;UBERON:0001016!4.98e-10!75;UBERON:0004121!7.29e-10!102;UBERON:0000924!7.29e-10!102;UBERON:0006601!7.29e-10!102;UBERON:0001017!5.02e-09!73;UBERON:0005743!5.02e-09!73;UBERON:0004535!1.11e-08!23;UBERON:0001009!1.11e-08!23;UBERON:0001049!2.10e-07!52;UBERON:0005068!2.10e-07!52;UBERON:0006241!2.10e-07!52;UBERON:0007135!2.10e-07!52;UBERON:0007100!2.82e-07!18;UBERON:0000948!2.82e-07!18;UBERON:0005498!2.82e-07!18;UBERON:0004140!2.82e-07!18;UBERON:0009881!2.82e-07!18;UBERON:0004141!2.82e-07!18;UBERON:0003084!2.82e-07!18;UBERON:0007005!2.82e-07!18;UBERON:0004139!2.82e-07!18;UBERON:0004291!2.82e-07!18;UBERON:0004872!9.07e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.99e-13,23;UBERON:0001009,1.99e-13,23;UBERON:0010314,7.12e-12,92;UBERON:0007100,2.39e-11,18;UBERON:0000948,2.39e-11,18;UBERON:0005498,2.39e-11,18;UBERON:0004140,2.39e-11,18;UBERON:0009881,2.39e-11,18;UBERON:0004141,2.39e-11,18;UBERON:0003084,2.39e-11,18;UBERON:0007005,2.39e-11,18;UBERON:0004139,2.39e-11,18;UBERON:0004291,2.39e-11,18;UBERON:0004121,1.24e-10,95;UBERON:0000924,1.24e-10,95;UBERON:0006601,1.24e-10,95;UBERON:0001016,5.28e-10,75;UBERON:0000073,7.45e-10,54;UBERON:0003103,7.46e-10,43;UBERON:0004111,9.94e-10,122;UBERON:0000025,1.07e-09,114;UBERON:0002020,1.97e-09,34;UBERON:0001049,3.22e-09,52;UBERON:0005068,3.22e-09,52;UBERON:0006241,3.22e-09,52;UBERON:0007135,3.22e-09,52;UBERON:0002021,4.44e-09,10;UBERON:0000411,4.44e-09,10;UBERON:0001950,4.44e-09,10;UBERON:0001017,1.06e-08,73;UBERON:0010371,1.49e-08,73;UBERON:0004872,2.15e-07,33;UBERON:0002240,2.33e-07,6;UBERON:0005174,2.33e-07,6;UBERON:0001137,2.33e-07,6
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,2.89562681343828,3.54819259268301,4.58866880404204,0,0.436050312760893,0,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,2.05807548828758,1.14613375975503,2.06268836910977,0.809265843438391,0,0.633831403506179,1.69422266034566,0,1.7997994345628,0.988866362566974,2.8419204597844,2.69640099466564,0,0.207379224616955,0.270011876663381,0,4.85606673486466,2.87129103237098,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.91531007127782,2.15049146558741,0.527545150920775,0.731901148819277,0,3.07101298901519,2.25105044012672,1.98637722109853,3.24091444021034,4.55589378557129,3.54158947068071,5.14938114665652,6.8014404096107,0.289864488701678,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,1.29894624606728,2.78695852022608,4.04419556011827,0.11418387971906,0,0,0.867426633830679,0.913396434936424,0.691846491768175,0.904335843315735,0.940709657085638,0.376999773989026,1.23597483867187,1.01219549843938,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0.359445373517761,0,0.254140454146129,2.39665023047716,2.74500361691176,1.38219787324151,2.78118912307642,5.37002460393694,2.0778804455956,2.59586020908412,0.916554274652847,0.746441823660558,0.252722758433675,0,0.260240885925407,0,0,0.753524089178575,0.680364991513279,0.512454881139399,0.468508622798644,1.03481348295606,0.431135985865684,0.378212160335639,1.05570674498369,0.43839146485515,0,0,0.411564272815887,0.398068533636986,1.40442637462647,0.51469581422943,1.13665399758237,1.44988040774851,0,1.2604344302271,2.13070262026689,1.96764231747404,1.85120535464854,1.39520366850245,2.14618721119695,4.32031766758527,2.46839774870221,1.31333971263276,3.08061476274252,2.63159977365598,3.07370161407471,2.68412837520744,1.47202963994889,0.308713837137853,0,0.528901133327089,1.06644125267617,0.696710015581316,0.257734922644187,0.403367049246685,0.889512175379481,0.380451252225118,0.949058123089023,0.658795818896044,1.00534083520108,0.596869416123452,0.19496408711912,0.898819408654221,1.29682829924817,1.1948476395262,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.49095073923223,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0,0,0,0,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.655453258862952,0.172684981865896,0.433947175744535,9.04747703635634,10.8781136763742,0,1.10374698521893,5.61927064957272,5.74337264301796,0.983609672260053,0.504941854408746,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0.404810701674894,0.876767573733936,1.18586333383957,2.89189184779626,3.97432238583152,0.712262414669021,1.95464351224291,2.14461159864296,0,0,0,0.188605079755898,0,0,1.55056975900933,0.363533729477506,0.356497378384721,1.26414703174326,0,0,1.02131881726136,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.713475270408282,0.164549020602121,0.608929898229199,0.938686832254841,0.21183207086382,0,1.6488625294148,1.29171541356724,1.38719727334758,2.626191568069,3.44695889464629,0.291480836629851,5.00648315428376,0.170870880797853,0.82554747185289,0.925972636848558,0.188368457004691,0.410082683163076,0,1.01987057996313,2.09927178485487,0.552799895217695,0,0.474503990371703,0.609958401380546,0.648032044930808,0.627264888043406,0.436725127492355,0.539457385539283,1.1571483801547,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0.288030006257865,0.316011120628178,0.608175645870493,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0.100966449948148,0.304827226619999,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,1.31377732815827,1.46521299413812,1.2862102744744,0,2.82375921308533,2.30162618253588,1.71868654031819,2.06223818812425,2.05524755931193,2.2661816921691,4.72515750162264,2.70192721934532,3.62513927187364,2.5888015587591,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0,1.10306105070008,0.666740183404846,0,0.962757628775446,0.505394423527595,0.760437899670719,0,0.842773567228942,0.576226371643824,0.861532034334199,0.952587382566147,0.231768651889711,1.15745532278223,1.64834360321323,0.883193520806384,0.342869252385415,0.70990322463735,0,0.872078499793971,0.0941093804153306,0.507687647350059,0.182927972872773,0.789209134313529,1.35804113845862,0,0.593175090620871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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,2.89562681343828,3.54819259268301,4.58866880404204,0,0.436050312760893,0,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,2.05807548828758,1.14613375975503,2.06268836910977,0.809265843438391,0,0.633831403506179,1.69422266034566,0,1.7997994345628,0.988866362566974,2.8419204597844,2.69640099466564,0,0.207379224616955,0.270011876663381,0,4.85606673486466,2.87129103237098,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.91531007127782,2.15049146558741,0.527545150920775,0.731901148819277,0,3.07101298901519,2.25105044012672,1.98637722109853,3.24091444021034,4.55589378557129,3.54158947068071,5.14938114665652,6.8014404096107,0.289864488701678,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,1.29894624606728,2.78695852022608,4.04419556011827,0.11418387971906,0,0,0.867426633830679,0.913396434936424,0.691846491768175,0.904335843315735,0.940709657085638,0.376999773989026,1.23597483867187,1.01219549843938,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.878342391034642,0.41889341362691,0.255457055208591,0.359445373517761,0,0.254140454146129,2.39665023047716,2.74500361691176,1.38219787324151,2.78118912307642,5.37002460393694,2.0778804455956,2.59586020908412,0.916554274652847,0.746441823660558,0.252722758433675,0,0.260240885925407,0,0,0.753524089178575,0.680364991513279,0.512454881139399,0.468508622798644,1.03481348295606,0.431135985865684,0.378212160335639,1.05570674498369,0.43839146485515,0,0,0.411564272815887,0.398068533636986,1.40442637462647,0.51469581422943,1.13665399758237,1.44988040774851,0,1.2604344302271,2.13070262026689,1.96764231747404,1.85120535464854,1.39520366850245,2.14618721119695,4.32031766758527,2.46839774870221,1.31333971263276,3.08061476274252,2.63159977365598,3.07370161407471,2.68412837520744,1.47202963994889,0.308713837137853,0,0.528901133327089,1.06644125267617,0.696710015581316,0.257734922644187,0.403367049246685,0.889512175379481,0.380451252225118,0.949058123089023,0.658795818896044,1.00534083520108,0.596869416123452,0.19496408711912,0.898819408654221,1.29682829924817,1.1948476395262,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.49095073923223,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0,0,0,0,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.655453258862952,0.172684981865896,0.433947175744535,9.04747703635634,10.8781136763742,0,1.10374698521893,5.61927064957272,5.74337264301796,0.983609672260053,0.504941854408746,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0.404810701674894,0.876767573733936,1.18586333383957,2.89189184779626,3.97432238583152,0.712262414669021,1.95464351224291,2.14461159864296,0,0,0,0.188605079755898,0,0,1.55056975900933,0.363533729477506,0.356497378384721,1.26414703174326,0,0,1.02131881726136,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.713475270408282,0.164549020602121,0.608929898229199,0.938686832254841,0.21183207086382,0,1.6488625294148,1.29171541356724,1.38719727334758,2.626191568069,3.44695889464629,0.291480836629851,5.00648315428376,0.170870880797853,0.82554747185289,0.925972636848558,0.188368457004691,0.410082683163076,0,1.01987057996313,2.09927178485487,0.552799895217695,0,0.474503990371703,0.609958401380546,0.648032044930808,0.627264888043406,0.436725127492355,0.539457385539283,1.1571483801547,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0.288030006257865,0.316011120628178,0.608175645870493,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0.100966449948148,0.304827226619999,0,0,0,0.116876902181569,0,0,0,0,1.9318959403219,1.31377732815827,1.46521299413812,1.2862102744744,0,2.82375921308533,2.30162618253588,1.71868654031819,2.06223818812425,2.05524755931193,2.2661816921691,4.72515750162264,2.70192721934532,3.62513927187364,2.5888015587591,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0,1.10306105070008,0.666740183404846,0,0.962757628775446,0.505394423527595,0.760437899670719,0,0.842773567228942,0.576226371643824,0.861532034334199,0.952587382566147,0.231768651889711,1.15745532278223,1.64834360321323,0.883193520806384,0.342869252385415,0.70990322463735,0,0.872078499793971,0.0941093804153306,0.507687647350059,0.182927972872773,0.789209134313529,1.35804113845862,0,0.593175090620871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|short_description=p4@Pcdh7
|short_description=p4@Pcdh7
}}
}}

Latest revision as of 02:36, 26 September 2015

Short description:p4@Pcdh7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pcdh7_5end
Coexpression cluster:NA
Association with transcript: 243bp_to_ENSMUST00000068110, NM_001122758, NM_018764, uc008xlt.2, uc008xlu.2, uc008xlv.2_5end
EntrezGene:Pcdh7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pcdh7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system1.99e-1323
circulatory system1.99e-1323
structure with developmental contribution from neural crest7.12e-1292
primary circulatory organ2.39e-1118
heart2.39e-1118
primitive heart tube2.39e-1118
primary heart field2.39e-1118
anterior lateral plate mesoderm2.39e-1118
heart tube2.39e-1118
heart primordium2.39e-1118
cardiac mesoderm2.39e-1118
cardiogenic plate2.39e-1118
heart rudiment2.39e-1118
ectoderm-derived structure1.24e-1095
ectoderm1.24e-1095
presumptive ectoderm1.24e-1095
nervous system5.28e-1075
regional part of nervous system7.45e-1054
compound organ7.46e-1043
anatomical conduit9.94e-10122
tube1.07e-09114
gray matter1.97e-0934
neural tube3.22e-0952
neural rod3.22e-0952
future spinal cord3.22e-0952
neural keel3.22e-0952
occipital lobe4.44e-0910
visual cortex4.44e-0910
neocortex4.44e-0910
central nervous system1.06e-0873
ecto-epithelium1.49e-0873
splanchnic layer of lateral plate mesoderm2.15e-0733
spinal cord2.33e-076
dorsal region element2.33e-076
dorsum2.33e-076
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