FFCP PHASE1:Mm9::chr12:8945256..8945271,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:8945256..8945271,+ | |||
|description=CAGE_peak_at_chr12:8945256..8945271,+ | |description=CAGE_peak_at_chr12:8945256..8945271,+ | ||
|id=chr12:8945256..8945271,+ | |id=chr12:8945256..8945271,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.22e-15!50;CL:0000393!5.12e-13!39;CL:0000211!5.12e-13!39;CL:0000221!6.25e-12!44;CL:0000133!6.25e-12!44;CL:0002319!1.62e-11!43;CL:0000540!1.43e-09!33;CL:0000047!1.43e-09!33;CL:0000031!1.43e-09!33;CL:0000404!1.43e-09!33;CL:0002321!3.62e-09!70;CL:0000220!3.62e-09!70 | |ontology_enrichment_celltype=CL:0000055!1.22e-15!50;CL:0000393!5.12e-13!39;CL:0000211!5.12e-13!39;CL:0000221!6.25e-12!44;CL:0000133!6.25e-12!44;CL:0002319!1.62e-11!43;CL:0000540!1.43e-09!33;CL:0000047!1.43e-09!33;CL:0000031!1.43e-09!33;CL:0000404!1.43e-09!33;CL:0002321!3.62e-09!70;CL:0000220!3.62e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.20e-18,39;CL:0000211,1.20e-18,39;CL:0002321,1.31e-15,70;CL:0000221,4.98e-15,44;CL:0000133,4.98e-15,44;CL:0002319,3.26e-14,43;CL:0000540,9.07e-12,33;CL:0000047,9.07e-12,33;CL:0000031,9.07e-12,33;CL:0000404,9.07e-12,33;CL:0000723,3.93e-11,91;CL:0000048,3.93e-11,91;CL:0000107,6.00e-11,9;CL:0000680,5.45e-10,6;CL:0000187,5.45e-10,6;CL:0000056,5.45e-10,6;CL:0000034,6.97e-10,97;CL:0000222,2.08e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.37e-12!75;UBERON:0001016!8.37e-12!75;UBERON:0001017!1.21e-11!73;UBERON:0005743!1.21e-11!73;UBERON:0004121!5.37e-10!102;UBERON:0000924!5.37e-10!102;UBERON:0006601!5.37e-10!102;UBERON:0002020!7.61e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!8.37e-12!75;UBERON:0001016!8.37e-12!75;UBERON:0001017!1.21e-11!73;UBERON:0005743!1.21e-11!73;UBERON:0004121!5.37e-10!102;UBERON:0000924!5.37e-10!102;UBERON:0006601!5.37e-10!102;UBERON:0002020!7.61e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.00e-11,9;UBERON:0001017,5.63e-10,73;UBERON:0001016,1.65e-09,75;UBERON:0000010,1.25e-08,11;UBERON:0007524,3.96e-08,11;UBERON:0003077,3.96e-08,11;UBERON:0007285,3.96e-08,11;UBERON:0000383,3.11e-07,10;UBERON:0004535,6.10e-07,23;UBERON:0001009,6.10e-07,23 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0.0874204024189974,0,0,0.699561878128147,0.157731082679119,0.685572168028694,0.42438965179803,1.87095238332354,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0,1.36609096991689,0,4.90997590104751,3.4468156614635,1.46837401729345,0.782391344348039,0.436050312760893,1.75748946187577,1.74986909166855,1.25987779462826,0,0,0,0,1.80081605225163,1.43266719969378,5.15672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0.677689064138264,0,1.3498495759221,0.988866362566974,0.7104801149461,3.29560121570245,1.53687322128622,1.03689612308478,0.810035629990144,1.05162480675691,0.856952953211411,1.10434270475807,0.122490799214954,0.862609239164127,0.919218786610021,2.20231761998777,0.638436690425939,1.68967186581868,0.131886287730194,0.640413505216868,0.52091337055676,0.837548997004143,1.12552522006336,2.13917546887534,2.06240009831567,1.42371680799103,0.372798891650601,0.832988126665025,0.302286240427142,0.579728977403356,2.58127163094416,0,0.539703191637817,1.29955283489534,0,0.140444420131752,0.511290967734173,2.33807404142582,4.59341446863442,1.12674735821344,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.79928715803342,0,0.148442139064825,0.867426633830679,0,0,1.20578112442098,0.352766121407114,0.376999773989026,0.494389935468748,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0.599075622529601,0,0.254140454146129,0.599162557619291,0.457500602818626,0.376963056338593,0,0.255715457330331,0.41557608911912,0.162241263067758,0.712875546952214,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.753524089178575,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.995171334092466,0,0,0.284163499395593,0,0.469052119962192,0.540186184383045,0,0.196764231747404,1.07986979021165,1.39520366850245,1.07309360559848,1.40118410840603,1.31647879930784,1.47750717671186,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0.420579897128254,0.823236899034275,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,2.37751854862164,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.387904974335251,0.420814919341911,0.69560190836683,0.738050739898011,0.470996183524124,0.246794327843601,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,7.18841032636773,0,0.624075346229121,0.505157755894224,0,0,0,0,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,0.81931657357869,1.03610989119537,0.578596234326046,4.52373851817817,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.819674726883377,1.26235463602186,1.57754109708128,0,3.23135096599198,2.62865677747807,3.11918143715352,1.41538265394416,2.02405350837447,3.50707029493574,1.58115111178609,0.321321316421807,0.567760340833074,0.712262414669021,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,0,1.42598951353889,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.857348140126369,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,0,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,1.09181281873089,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.387479470433193,1.35164900392623,0.58678619322877,0.5208175393758,0.104859344425711,0.483168241652012,0.288030006257865,0,0.405450430580328,0.616265742988964,0,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0.386379188064381,0.187682475451182,0.36630324853453,0,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,2.06223818812425,2.05524755931193,2.2661816921691,0,1.35096360967266,0.906284817968409,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.953744759789284,0.726732083161643,0.564656282491984,1.01537529470012,0.365855945745545,1.31534855718921,0.950628796921032,0,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=1.28119077683835,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0.0874204024189974,0,0,0.699561878128147,0.157731082679119,0.685572168028694,0.42438965179803,1.87095238332354,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0,1.36609096991689,0,4.90997590104751,3.4468156614635,1.46837401729345,0.782391344348039,0.436050312760893,1.75748946187577,1.74986909166855,1.25987779462826,0,0,0,0,1.80081605225163,1.43266719969378,5.15672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0.677689064138264,0,1.3498495759221,0.988866362566974,0.7104801149461,3.29560121570245,1.53687322128622,1.03689612308478,0.810035629990144,1.05162480675691,0.856952953211411,1.10434270475807,0.122490799214954,0.862609239164127,0.919218786610021,2.20231761998777,0.638436690425939,1.68967186581868,0.131886287730194,0.640413505216868,0.52091337055676,0.837548997004143,1.12552522006336,2.13917546887534,2.06240009831567,1.42371680799103,0.372798891650601,0.832988126665025,0.302286240427142,0.579728977403356,2.58127163094416,0,0.539703191637817,1.29955283489534,0,0.140444420131752,0.511290967734173,2.33807404142582,4.59341446863442,1.12674735821344,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.79928715803342,0,0.148442139064825,0.867426633830679,0,0,1.20578112442098,0.352766121407114,0.376999773989026,0.494389935468748,0.144599356919912,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0.599075622529601,0,0.254140454146129,0.599162557619291,0.457500602818626,0.376963056338593,0,0.255715457330331,0.41557608911912,0.162241263067758,0.712875546952214,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.753524089178575,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.995171334092466,0,0,0.284163499395593,0,0.469052119962192,0.540186184383045,0,0.196764231747404,1.07986979021165,1.39520366850245,1.07309360559848,1.40118410840603,1.31647879930784,1.47750717671186,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0.420579897128254,0.823236899034275,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0,0,0,2.37751854862164,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.387904974335251,0.420814919341911,0.69560190836683,0.738050739898011,0.470996183524124,0.246794327843601,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,7.18841032636773,0,0.624075346229121,0.505157755894224,0,0,0,0,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,0.81931657357869,1.03610989119537,0.578596234326046,4.52373851817817,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.819674726883377,1.26235463602186,1.57754109708128,0,3.23135096599198,2.62865677747807,3.11918143715352,1.41538265394416,2.02405350837447,3.50707029493574,1.58115111178609,0.321321316421807,0.567760340833074,0.712262414669021,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,0,1.42598951353889,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.857348140126369,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,0,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,1.09181281873089,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.387479470433193,1.35164900392623,0.58678619322877,0.5208175393758,0.104859344425711,0.483168241652012,0.288030006257865,0,0.405450430580328,0.616265742988964,0,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0.386379188064381,0.187682475451182,0.36630324853453,0,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,2.06223818812425,2.05524755931193,2.2661816921691,0,1.35096360967266,0.906284817968409,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.953744759789284,0.726732083161643,0.564656282491984,1.01537529470012,0.365855945745545,1.31534855718921,0.950628796921032,0,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr12:8945256..8945271,+ | |short_description=p@chr12:8945256..8945271,+ | ||
}} | }} |
Latest revision as of 11:12, 5 August 2015
Short description: | p@chr12:8945256..8945271, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8945256..8945271, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.20e-18 | 39 |
electrically active cell | 1.20e-18 | 39 |
embryonic cell | 1.31e-15 | 70 |
ectodermal cell | 4.98e-15 | 44 |
neurectodermal cell | 4.98e-15 | 44 |
neural cell | 3.26e-14 | 43 |
neuron | 9.07e-12 | 33 |
neuronal stem cell | 9.07e-12 | 33 |
neuroblast | 9.07e-12 | 33 |
electrically signaling cell | 9.07e-12 | 33 |
somatic stem cell | 3.93e-11 | 91 |
multi fate stem cell | 3.93e-11 | 91 |
autonomic neuron | 6.00e-11 | 9 |
muscle precursor cell | 5.45e-10 | 6 |
muscle cell | 5.45e-10 | 6 |
myoblast | 5.45e-10 | 6 |
stem cell | 6.97e-10 | 97 |
mesodermal cell | 2.08e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 6.00e-11 | 9 |
central nervous system | 5.63e-10 | 73 |
nervous system | 1.65e-09 | 75 |
peripheral nervous system | 1.25e-08 | 11 |
dense mesenchyme tissue | 3.96e-08 | 11 |
paraxial mesoderm | 3.96e-08 | 11 |
presumptive paraxial mesoderm | 3.96e-08 | 11 |
musculature of body | 3.11e-07 | 10 |
cardiovascular system | 6.10e-07 | 23 |
circulatory system | 6.10e-07 | 23 |