Personal tools

FFCP PHASE1:Mm9::chr3:102008499..102008570,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229658
|EntrezGene=229658
|HGNC=
|HGNC=
|MCL_coexpression_id=2355
|TSSclassifier=NA
|UniProt=Q80Z96
|UniProt=Q80Z96
|association_with_transcript=45bp_to_ENSMUST00000159388,NM_177545,uc008qrs.2_5end
|association_with_transcript=45bp_to_ENSMUST00000159388,NM_177545,uc008qrs.2_5end
|cluster_id=chr3:102008499..102008570,-
|description=CAGE_peak_1_at_Vangl1_5end
|description=CAGE_peak_1_at_Vangl1_5end
|id=chr3:102008499..102008570,-
|id=chr3:102008499..102008570,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!7.28e-07!17;UBERON:0005181!7.28e-07!17;UBERON:0002224!7.28e-07!17;UBERON:0000915!7.28e-07!17;UBERON:0008947!7.28e-07!17;UBERON:0003258!7.28e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.22e-07,17;UBERON:0005181,7.22e-07,17;UBERON:0002224,7.22e-07,17;UBERON:0000915,7.22e-07,17;UBERON:0008947,7.22e-07,17;UBERON:0003258,7.22e-07,17
|phase1_expression=12.6517589212787,1.74487703819681,0.909998478779072,0,0.500895729946347,5.03637815735669,3.73780224952841,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0.699561878128147,0.157731082679119,0,0,10.0351082378262,4.36880185283895,3.91799683708403,3.99981056983517,4.5881856213434,2.29692785646008,0.86152399231815,4.95583835177545,1.52018735565099,3.02436155711917,8.42575940490158,0,0,0,4.62162591602039,5.31950865147176,4.90006455029686,0,0,0,0,0,0,24.8016731411887,21.8974171434151,18.5382219683298,45.3786979721863,13.0815093828268,19.3323840806335,20.9984291000226,32.6168362387095,27.3129872293446,0,0,0,22.1243114990914,20.057340795713,27.3306208907044,2.22548106945558,3.1739458756322,4.43681982454325,27.7852516296688,39.1289710288901,4.04954872776629,4.94433181283487,0.7104801149461,12.2836045312546,12.6792040756113,2.48855069540346,2.16009501330705,1.47227472945967,7.7125765789027,9.93908434282261,1.22490799214954,1.0543001812006,4.5960939330501,11.0115880999389,10.0872997087298,7.0659005297872,3.82470234417562,4.11694396210843,2.08365348222704,5.02529398202486,6.19038871034848,7.94550888439413,9.42811473515737,7.83044244395066,4.28718725398191,13.4792624133068,16.7768863437064,28.6965843814661,12.9063581547208,5.439770669662,9.17495425784289,11.0461990966104,15.2329141613094,7.44355426698285,20.9629296771011,14.5480162577607,13.0735642568826,14.7885590765515,15.3991772897181,45.8649431471962,35.5533351576666,24.0305055522448,30.1498239915367,17.1878311305026,7.87868770061514,4.66088190564909,11.7269289861212,9.88866362566974,11.8741536541735,11.992005857315,12.3592565253151,17.0503625346772,11.6869929936598,15.5732829672656,9.39895819979426,4.42305275974937,12.6178142958979,6.18356251689102,6.30337829075789,3.72783522436244,4.39171195517321,4.60782754989601,2.81002760729451,0.359445373517761,0,0.127070227073065,5.69204429738326,5.94750783664214,2.01046963380583,2.08589184230732,3.58001640262463,8.72709787150152,7.30085683804909,30.4499697912446,10.3257785606377,6.57079171927554,5.6819301089348,6.8963834770233,5.51765050640335,9.72335500948886,10.7000420663358,9.18492738542926,9.48041530107888,7.87094486301722,7.76110112217047,6.89817577385095,10.4008344092301,13.3722854364601,15.7820927347854,15.0145514581823,16.3678518265418,16.2567887762275,16.1217756122979,0.702213187313235,0,0,16.7771875753757,11.0227248191115,12.244220179349,19.8865577891577,17.5120166255189,14.8096428371883,16.7424440220294,16.901224288176,16.1136172466694,14.3167069424728,13.6258995185649,13.7816976227955,10.9649990568999,12.2948064562988,14.091673969839,4.41608891984667,5.45394445610208,0.660837565967596,1.58670339998127,9.59797127408553,8.12828351511535,14.8197580520407,10.6892268050372,7.56085349072559,15.0278244628922,7.11793592316767,9.22314146454461,10.8074139784116,12.3353012665514,11.1129529657898,8.08937467788799,8.42938394511308,6.77080329064848,11.569741958138,13.9383185383869,11.270773567308,14.8665469327079,14.5464365375719,16.0611027548829,18.1488861546618,16.0895061297766,18.5258498852822,15.3012483263033,6.52195779591728,3.83743743147016,4.12773889737726,3.37293168577281,3.85434230638156,6.27060615356284,4.32863948028414,7.19240343627027,7.7824908852017,8.23684239564244,8.62609239164127,11.5363693777236,14.9778083094989,11.1134706296729,11.8402292924462,12.0610880340842,17.5515530658274,16.1067700004912,12.0594082567099,14.7678224624414,14.3161051455986,18.9282070909252,18.3293603482231,16.9766273636285,25.2216230569906,25.2469746199603,23.4398509926506,19.99132439532,17.7865531321872,18.949026674178,0,2.71952841909355,5.90117127622843,15.1765210467603,3.69266356971921,6.32943107597897,26.3935262056447,4.79694761688309,19.8770178232242,17.1793047490521,32.9597798531182,18.8785350382516,14.4819138153556,15.0030561318081,25.9078849071932,22.503701059171,26.4842811224171,3.21321316421807,17.458630480617,17.8065603667255,24.7588178217436,22.7658769702099,9.2921596837974,12.624593080059,8.76738315197778,12.8251454234011,15.9463022155617,22.4427657999067,14.9888410037568,21.8120237686503,18.8943610543902,8.53299246426703,7.37930260024991,9.28219889233682,19.4050575279659,7.92268813737765,12.9358683782754,14.1462443120851,23.9409315417069,33.7117065267913,28.4669805641669,35.9268639955227,8.91752490642099,14.8282449604674,10.3648347085832,45.5086058118485,30.0323833654384,25.8139318692507,30.6786924088061,35.2902934451882,8.16146342563582,5.56275906031529,2.05045056957423,12.7959858137198,8.33375373163703,2.63715839806567,2.1871076435364,1.37266903923914,1.35982743995084,2.09927178485487,3.45499934511059,10.5013767981662,9.49007980743406,19.1120299099238,23.1131429358655,20.6997413054324,17.4690050996942,17.9369580691812,19.67152246263,13.0877970992015,12.4430374360121,20.5041973318685,0,10.3166416770345,8.60384150376908,12.055973677331,17.4365761694937,14.8681390431885,18.7771581833206,17.4473875690893,6.71099804324549,1.93267296660805,3.74439008135225,2.8441000856536,15.8125667926328,12.7361586884386,8.57477431653447,6.08690765269437,5.96044064343795,4.20684073319891,3.39685912501528,3.43285929823702,3.27689268616499,1.71404514732629,2.0466154955348,2.21287235772758,2.10378423926824,18.8186218400625,20.8666796171621,11.0348043629655,13.5986539254904,21.2508553435409,15.9530104133505,19.4140721723301,32.7983619990971,20.0628841614145,2.25900737046827,2.30162618253588,1.14579102687879,2.06223818812425,2.05524755931193,3.7769694869485,2.70009000092722,2.70192721934532,1.35942722695261,1.03552062350364,3.84013186061454,7.58147259461959,9.39034831647738,12.1553358534147,5.65955539095552,8.45680138870065,8.66762238426299,14.0103838922448,12.5158491740808,11.3713745293709,13.1809235942925,12.260712190095,12.3606789860245,15.3660365771686,12.2337548875456,14.2888107384922,13.0949288317687,13.8894638733868,10.714233420886,12.5119082114238,14.057639347802,13.665637074269,12.637118067208,14.2439488299682,10.9166881281784,12.4383473600764,15.0000937755674,13.9426947062057,14.3952360676613,13.4674145197857,13.64302708428,13.6921230502033,17.187703813127,11.4653262477615,15.2396222675102,18.485982767408,11.2287172053796,12.247650080753,12.4337415844748,14.117850823649,9.7384490960577
|phase1_expression=12.6517589212787,1.74487703819681,0.909998478779072,0,0.500895729946347,5.03637815735669,3.73780224952841,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0.699561878128147,0.157731082679119,0,0,10.0351082378262,4.36880185283895,3.91799683708403,3.99981056983517,4.5881856213434,2.29692785646008,0.86152399231815,4.95583835177545,1.52018735565099,3.02436155711917,8.42575940490158,0,0,0,4.62162591602039,5.31950865147176,4.90006455029686,0,0,0,0,0,0,24.8016731411887,21.8974171434151,18.5382219683298,45.3786979721863,13.0815093828268,19.3323840806335,20.9984291000226,32.6168362387095,27.3129872293446,0,0,0,22.1243114990914,20.057340795713,27.3306208907044,2.22548106945558,3.1739458756322,4.43681982454325,27.7852516296688,39.1289710288901,4.04954872776629,4.94433181283487,0.7104801149461,12.2836045312546,12.6792040756113,2.48855069540346,2.16009501330705,1.47227472945967,7.7125765789027,9.93908434282261,1.22490799214954,1.0543001812006,4.5960939330501,11.0115880999389,10.0872997087298,7.0659005297872,3.82470234417562,4.11694396210843,2.08365348222704,5.02529398202486,6.19038871034848,7.94550888439413,9.42811473515737,7.83044244395066,4.28718725398191,13.4792624133068,16.7768863437064,28.6965843814661,12.9063581547208,5.439770669662,9.17495425784289,11.0461990966104,15.2329141613094,7.44355426698285,20.9629296771011,14.5480162577607,13.0735642568826,14.7885590765515,15.3991772897181,45.8649431471962,35.5533351576666,24.0305055522448,30.1498239915367,17.1878311305026,7.87868770061514,4.66088190564909,11.7269289861212,9.88866362566974,11.8741536541735,11.992005857315,12.3592565253151,17.0503625346772,11.6869929936598,15.5732829672656,9.39895819979426,4.42305275974937,12.6178142958979,6.18356251689102,6.30337829075789,3.72783522436244,4.39171195517321,4.60782754989601,2.81002760729451,0.359445373517761,0,0.127070227073065,5.69204429738326,5.94750783664214,2.01046963380583,2.08589184230732,3.58001640262463,8.72709787150152,7.30085683804909,30.4499697912446,10.3257785606377,6.57079171927554,5.6819301089348,6.8963834770233,5.51765050640335,9.72335500948886,10.7000420663358,9.18492738542926,9.48041530107888,7.87094486301722,7.76110112217047,6.89817577385095,10.4008344092301,13.3722854364601,15.7820927347854,15.0145514581823,16.3678518265418,16.2567887762275,16.1217756122979,0.702213187313235,0,0,16.7771875753757,11.0227248191115,12.244220179349,19.8865577891577,17.5120166255189,14.8096428371883,16.7424440220294,16.901224288176,16.1136172466694,14.3167069424728,13.6258995185649,13.7816976227955,10.9649990568999,12.2948064562988,14.091673969839,4.41608891984667,5.45394445610208,0.660837565967596,1.58670339998127,9.59797127408553,8.12828351511535,14.8197580520407,10.6892268050372,7.56085349072559,15.0278244628922,7.11793592316767,9.22314146454461,10.8074139784116,12.3353012665514,11.1129529657898,8.08937467788799,8.42938394511308,6.77080329064848,11.569741958138,13.9383185383869,11.270773567308,14.8665469327079,14.5464365375719,16.0611027548829,18.1488861546618,16.0895061297766,18.5258498852822,15.3012483263033,6.52195779591728,3.83743743147016,4.12773889737726,3.37293168577281,3.85434230638156,6.27060615356284,4.32863948028414,7.19240343627027,7.7824908852017,8.23684239564244,8.62609239164127,11.5363693777236,14.9778083094989,11.1134706296729,11.8402292924462,12.0610880340842,17.5515530658274,16.1067700004912,12.0594082567099,14.7678224624414,14.3161051455986,18.9282070909252,18.3293603482231,16.9766273636285,25.2216230569906,25.2469746199603,23.4398509926506,19.99132439532,17.7865531321872,18.949026674178,0,2.71952841909355,5.90117127622843,15.1765210467603,3.69266356971921,6.32943107597897,26.3935262056447,4.79694761688309,19.8770178232242,17.1793047490521,32.9597798531182,18.8785350382516,14.4819138153556,15.0030561318081,25.9078849071932,22.503701059171,26.4842811224171,3.21321316421807,17.458630480617,17.8065603667255,24.7588178217436,22.7658769702099,9.2921596837974,12.624593080059,8.76738315197778,12.8251454234011,15.9463022155617,22.4427657999067,14.9888410037568,21.8120237686503,18.8943610543902,8.53299246426703,7.37930260024991,9.28219889233682,19.4050575279659,7.92268813737765,12.9358683782754,14.1462443120851,23.9409315417069,33.7117065267913,28.4669805641669,35.9268639955227,8.91752490642099,14.8282449604674,10.3648347085832,45.5086058118485,30.0323833654384,25.8139318692507,30.6786924088061,35.2902934451882,8.16146342563582,5.56275906031529,2.05045056957423,12.7959858137198,8.33375373163703,2.63715839806567,2.1871076435364,1.37266903923914,1.35982743995084,2.09927178485487,3.45499934511059,10.5013767981662,9.49007980743406,19.1120299099238,23.1131429358655,20.6997413054324,17.4690050996942,17.9369580691812,19.67152246263,13.0877970992015,12.4430374360121,20.5041973318685,0,10.3166416770345,8.60384150376908,12.055973677331,17.4365761694937,14.8681390431885,18.7771581833206,17.4473875690893,6.71099804324549,1.93267296660805,3.74439008135225,2.8441000856536,15.8125667926328,12.7361586884386,8.57477431653447,6.08690765269437,5.96044064343795,4.20684073319891,3.39685912501528,3.43285929823702,3.27689268616499,1.71404514732629,2.0466154955348,2.21287235772758,2.10378423926824,18.8186218400625,20.8666796171621,11.0348043629655,13.5986539254904,21.2508553435409,15.9530104133505,19.4140721723301,32.7983619990971,20.0628841614145,2.25900737046827,2.30162618253588,1.14579102687879,2.06223818812425,2.05524755931193,3.7769694869485,2.70009000092722,2.70192721934532,1.35942722695261,1.03552062350364,3.84013186061454,7.58147259461959,9.39034831647738,12.1553358534147,5.65955539095552,8.45680138870065,8.66762238426299,14.0103838922448,12.5158491740808,11.3713745293709,13.1809235942925,12.260712190095,12.3606789860245,15.3660365771686,12.2337548875456,14.2888107384922,13.0949288317687,13.8894638733868,10.714233420886,12.5119082114238,14.057639347802,13.665637074269,12.637118067208,14.2439488299682,10.9166881281784,12.4383473600764,15.0000937755674,13.9426947062057,14.3952360676613,13.4674145197857,13.64302708428,13.6921230502033,17.187703813127,11.4653262477615,15.2396222675102,18.485982767408,11.2287172053796,12.247650080753,12.4337415844748,14.117850823649,9.7384490960577
|short_description=p1@Vangl1
|short_description=p1@Vangl1
}}
}}

Latest revision as of 05:01, 27 September 2015

Short description:p1@Vangl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vangl1_5end
Coexpression cluster:MCL_coexpression_mm9:2355
Association with transcript: 45bp_to_ENSMUST00000159388, NM_177545, uc008qrs.2_5end
EntrezGene:Vangl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vangl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B745.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C432.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D913.48
Mouse Schwann, donor2.CNhs12573.11746-123F916.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C59.89
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F512.36
adrenal gland, neonate N00.CNhs11191.1311-23C117.05
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F512.62
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.33
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C69.18
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G87.87
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H210.40
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A815.78
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I616.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E916.78
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I912.24
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G316.90
heart, neonate N00.CNhs11213.639-21E316.11
heart, neonate N03.CNhs11221.1349-25I214.32
heart, neonate N10.CNhs11118.749-24G113.63
heart, neonate N16.CNhs11209.782-15G113.78
heart, neonate N20.CNhs11127.821-26I610.96
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D214.09
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D814.82
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I911.57
kidney, embryo E15.CNhs10997.434-16F813.94
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G716.06
kidney, neonate N10.CNhs11206.758-6D518.15
kidney, neonate N20.CNhs11113.832-19I116.09
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H115.30
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B914.98
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B117.55
lung, embryo E12.CNhs10522.354-16G216.11
lung, embryo E14.CNhs10604.404-26F812.06
lung, embryo E15.CNhs11020.432-17C514.77
lung, embryo E16.CNhs10998.458-17B614.32
lung, embryo E17.CNhs10605.480-44A618.93
lung, embryo E18.CNhs10583.1287-20I618.33
lung, neonate N00.CNhs11224.640-42C616.98
lung, neonate N06.CNhs11212.683-20E525.22
lung, neonate N07.CNhs11111.715-19A325.25
lung, neonate N10.CNhs11219.750-23E623.44
lung, neonate N20.CNhs11109.822-18A419.99
lung, neonate N25.CNhs11119.1359-25C717.79
lung, neonate N30.CNhs11133.1394-42H218.95
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.50
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I717.46
ovary, embryo E18.CNhs11040.505-44H717.81
ovary, neonate N00.CNhs11217.1299-22I424.76
oviduct, adult pregnant day01.CNhs10500.988-6G622.77
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F412.62
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C712.94
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B923.94
pituitary gland, embryo E16.CNhs11036.449-43F633.71
pituitary gland, embryo E17.CNhs11039.1265-44F528.47
pituitary gland, neonate N00.CNhs11190.1308-22E935.93
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F810.36
skin, adult.CNhs10492.30-1C345.51
skin, neonate N00.CNhs11124.650-25G430.03
skin, neonate N03.CNhs11215.662-22H325.81
skin, neonate N06.CNhs11097.693-20I530.68
skin, neonate N10.CNhs11108.762-6C435.29
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C112.80
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G819.11
stomach, embryo E16.CNhs11022.459-17D423.11
stomach, embryo E17.CNhs11006.1035-18D520.70
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B817.94
stomach, neonate N07.CNhs11210.718-18A919.67
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I112.44
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F510.32
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G512.06
testis, embryo E17.CNhs11029.486-18I517.44
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B718.78
testis, neonate N07.CNhs11222.726-26I417.45
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I212.74
thymus, embryo E16.CNhs11002.456-26C58.57
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B418.82
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.60
urinary bladder, adult.CNhs10481.879-12E421.25
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E519.41
vagina, adult.CNhs10502.89-27D532.80
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F915.24
whole body, embryo E17.CNhs10517.475-3I518.49
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B49.74





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element7.22e-0717
thoracic segment organ7.22e-0717
thoracic cavity7.22e-0717
thoracic segment of trunk7.22e-0717
respiratory primordium7.22e-0717
endoderm of foregut7.22e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:102008499..102008570,-&oldid=4293944"