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FFCP PHASE1:Mm9::chr12:71448287..71448347,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=94090
|EntrezGene=94090
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C7M3,E9QLH4,E9Q524,Q3TR28
|UniProt=Q8C7M3,E9QLH4,E9Q524,Q3TR28
|association_with_transcript=253bp_to_ENSMUST00000081485,ENSMUST00000110520,ENSMUST00000110522,ENSMUST00000167755,NM_001110202,NM_001110203,NM_053167,uc007nto.2,uc007ntp.2,uc007ntq.2,uc007ntr.2,uc007nts.2,uc011ynj.1,uc011ynk.1,uc011ynl.1_5end
|association_with_transcript=253bp_to_ENSMUST00000081485,ENSMUST00000110520,ENSMUST00000110522,ENSMUST00000167755,NM_001110202,NM_001110203,NM_053167,uc007nto.2,uc007ntp.2,uc007ntq.2,uc007ntr.2,uc007nts.2,uc011ynj.1,uc011ynk.1,uc011ynl.1_5end
|cluster_id=chr12:71448287..71448347,-
|description=CAGE_peak_1_at_Trim9_5end
|description=CAGE_peak_1_at_Trim9_5end
|id=chr12:71448287..71448347,-
|id=chr12:71448287..71448347,-
|ontology_enrichment_celltype=CL:0000221!1.12e-17!44;CL:0000133!1.12e-17!44;CL:0002319!1.24e-17!43;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000117!4.97e-13!23;CL:0000337!4.97e-13!23;CL:0000055!2.15e-12!50;CL:0000393!6.75e-10!39;CL:0000211!6.75e-10!39
|ontology_enrichment_celltype=CL:0000221!1.12e-17!44;CL:0000133!1.12e-17!44;CL:0002319!1.24e-17!43;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000117!4.97e-13!23;CL:0000337!4.97e-13!23;CL:0000055!2.15e-12!50;CL:0000393!6.75e-10!39;CL:0000211!6.75e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-20,44;CL:0000133,2.04e-20,44;CL:0002319,2.31e-20,43;CL:0000540,1.72e-16,33;CL:0000047,1.72e-16,33;CL:0000031,1.72e-16,33;CL:0000404,1.72e-16,33;CL:0000117,5.63e-15,23;CL:0000337,5.63e-15,23;CL:0000393,8.72e-12,39;CL:0000211,8.72e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.78e-36!102;UBERON:0000924!6.78e-36!102;UBERON:0006601!6.78e-36!102;UBERON:0001017!8.32e-36!73;UBERON:0005743!8.32e-36!73;UBERON:0000073!1.00e-35!75;UBERON:0001016!1.00e-35!75;UBERON:0002346!7.34e-30!71;UBERON:0003075!7.34e-30!71;UBERON:0007284!7.34e-30!71;UBERON:0000033!4.59e-27!63;UBERON:0001049!8.87e-27!52;UBERON:0005068!8.87e-27!52;UBERON:0006241!8.87e-27!52;UBERON:0007135!8.87e-27!52;UBERON:0000955!1.91e-25!50;UBERON:0006238!1.91e-25!50;UBERON:0002616!1.17e-24!49;UBERON:0003056!1.22e-22!49;UBERON:0002020!9.73e-21!34;UBERON:0003080!1.26e-19!40;UBERON:0002780!4.54e-19!39;UBERON:0001890!4.54e-19!39;UBERON:0006240!4.54e-19!39;UBERON:0002791!1.98e-17!29;UBERON:0003528!1.98e-17!29;UBERON:0001893!1.98e-17!29;UBERON:0000956!4.34e-13!21;UBERON:0001869!4.34e-13!21;UBERON:0000203!4.34e-13!21;UBERON:0007811!7.99e-12!86;UBERON:0002619!3.07e-11!17;UBERON:0000153!1.62e-10!94;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12
|ontology_enrichment_uberon=UBERON:0004121!6.78e-36!102;UBERON:0000924!6.78e-36!102;UBERON:0006601!6.78e-36!102;UBERON:0001017!8.32e-36!73;UBERON:0005743!8.32e-36!73;UBERON:0000073!1.00e-35!75;UBERON:0001016!1.00e-35!75;UBERON:0002346!7.34e-30!71;UBERON:0003075!7.34e-30!71;UBERON:0007284!7.34e-30!71;UBERON:0000033!4.59e-27!63;UBERON:0001049!8.87e-27!52;UBERON:0005068!8.87e-27!52;UBERON:0006241!8.87e-27!52;UBERON:0007135!8.87e-27!52;UBERON:0000955!1.91e-25!50;UBERON:0006238!1.91e-25!50;UBERON:0002616!1.17e-24!49;UBERON:0003056!1.22e-22!49;UBERON:0002020!9.73e-21!34;UBERON:0003080!1.26e-19!40;UBERON:0002780!4.54e-19!39;UBERON:0001890!4.54e-19!39;UBERON:0006240!4.54e-19!39;UBERON:0002791!1.98e-17!29;UBERON:0003528!1.98e-17!29;UBERON:0001893!1.98e-17!29;UBERON:0000956!4.34e-13!21;UBERON:0001869!4.34e-13!21;UBERON:0000203!4.34e-13!21;UBERON:0007811!7.99e-12!86;UBERON:0002619!3.07e-11!17;UBERON:0000153!1.62e-10!94;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-41,73;UBERON:0001016,1.46e-41,75;UBERON:0004121,5.43e-39,95;UBERON:0000924,5.43e-39,95;UBERON:0006601,5.43e-39,95;UBERON:0002346,1.73e-35,64;UBERON:0003075,1.73e-35,64;UBERON:0007284,1.73e-35,64;UBERON:0000073,9.69e-33,54;UBERON:0001049,4.47e-31,52;UBERON:0005068,4.47e-31,52;UBERON:0006241,4.47e-31,52;UBERON:0007135,4.47e-31,52;UBERON:0010371,6.39e-31,73;UBERON:0000955,3.59e-27,47;UBERON:0006238,3.59e-27,47;UBERON:0002616,2.89e-26,46;UBERON:0003056,3.15e-26,49;UBERON:0002020,5.33e-24,34;UBERON:0003080,1.07e-22,40;UBERON:0002780,4.81e-22,39;UBERON:0001890,4.81e-22,39;UBERON:0006240,4.81e-22,39;UBERON:0010314,1.75e-21,92;UBERON:0003528,3.99e-20,29;UBERON:0002791,3.99e-20,29;UBERON:0001893,3.99e-20,29;UBERON:0000956,4.81e-15,21;UBERON:0001869,4.81e-15,21;UBERON:0000203,4.81e-15,21;UBERON:0002619,7.02e-13,17;UBERON:0002021,1.46e-09,10;UBERON:0000411,1.46e-09,10;UBERON:0001950,1.46e-09,10;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12
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|short_description=p1@Trim9
|short_description=p1@Trim9
}}
}}

Latest revision as of 17:53, 26 September 2015

Short description:p1@Trim9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 253bp_to_ENSMUST00000081485, ENSMUST00000110520, ENSMUST00000110522, ENSMUST00000167755, NM_001110202, NM_001110203, NM_053167, uc007nto.2, uc007ntp.2, uc007ntq.2, uc007ntr.2, uc007nts.2, uc011ynj.1, uc011ynk.1, uc011ynl.1_5end
EntrezGene:Trim9
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Trim9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C261.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C473.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C342.28
Mouse Granule cells, donor2.CNhs12357.11731-123E351.31
Mouse Granule cells, donor3.CNhs12108.11636-122C750.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1181.10
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5129.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3103.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3105.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D452.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F446.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D847.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E479.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E569.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I682.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6149.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6130.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.43
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B293.40
cerebellum, neonate N30.CNhs11135.1395-42I2120.64
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A460.67
corpus striatum, adult.CNhs10487.19-21D887.84
corpus striatum, neonate N00.CNhs11226.630-43F157.30
cortex, adult.CNhs10473.12-14D5147.40
cortex, neonate N30.CNhs11107.1392-42F2162.12
diencephalon, adult.CNhs10482.20-12F289.14
diencephalon, neonate N30.CNhs11201.1388-42B2108.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C625.38
eyeball, neonate N01.CNhs11140.1532-43E725.24
eyeball, neonate N02.CNhs11205.1551-44G829.61
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8124.70
hippocampus, neonate N00.CNhs11228.627-43G133.14
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C265.50
medulla oblongata, neonate N30.CNhs11200.1396-42A366.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I9215.61
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C967.87
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G57.10
testis, neonate N00.CNhs11189.1300-22B76.34
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1210.09
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2227.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3222.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7250.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4186.34
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5213.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6210.61
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7167.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8175.37
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9209.69
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C69.76
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.04e-2044
neurectodermal cell2.04e-2044
neural cell2.31e-2043
neuron1.72e-1633
neuronal stem cell1.72e-1633
neuroblast1.72e-1633
electrically signaling cell1.72e-1633
CNS neuron (sensu Vertebrata)5.63e-1523
neuroblast (sensu Vertebrata)5.63e-1523
electrically responsive cell8.72e-1239
electrically active cell8.72e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.18e-4173
nervous system1.46e-4175
ectoderm-derived structure5.43e-3995
ectoderm5.43e-3995
presumptive ectoderm5.43e-3995
neurectoderm1.73e-3564
neural plate1.73e-3564
presumptive neural plate1.73e-3564
regional part of nervous system9.69e-3354
neural tube4.47e-3152
neural rod4.47e-3152
future spinal cord4.47e-3152
neural keel4.47e-3152
ecto-epithelium6.39e-3173
brain3.59e-2747
future brain3.59e-2747
regional part of brain2.89e-2646
pre-chordal neural plate3.15e-2649
gray matter5.33e-2434
anterior neural tube1.07e-2240
regional part of forebrain4.81e-2239
forebrain4.81e-2239
future forebrain4.81e-2239
structure with developmental contribution from neural crest1.75e-2192
brain grey matter3.99e-2029
regional part of telencephalon3.99e-2029
telencephalon3.99e-2029
cerebral cortex4.81e-1521
cerebral hemisphere4.81e-1521
pallium4.81e-1521
regional part of cerebral cortex7.02e-1317
occipital lobe1.46e-0910
visual cortex1.46e-0910
neocortex1.46e-0910
posterior neural tube1.09e-0812
chordal neural plate1.09e-0812
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