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FFCP PHASE1:Mm9::chr2:70400204..70400265,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14415
|EntrezGene=14415
|HGNC=
|HGNC=
|MCL_coexpression_id=251
|TSSclassifier=NA
|UniProt=D3Z1L8,P48318,Q548L6,Q8C6I7
|UniProt=D3Z1L8,P48318,Q548L6,Q8C6I7
|association_with_transcript=0bp_to_ENSMUST00000148210,ENSMUST00000155979,NM_008077,uc008jzj.1,uc008jzk.1_5end
|association_with_transcript=0bp_to_ENSMUST00000148210,ENSMUST00000155979,NM_008077,uc008jzj.1,uc008jzk.1_5end
|cluster_id=chr2:70400204..70400265,+
|description=CAGE_peak_1_at_Gad1_5end
|description=CAGE_peak_1_at_Gad1_5end
|id=chr2:70400204..70400265,+
|id=chr2:70400204..70400265,+
|ontology_enrichment_celltype=CL:0000117!6.36e-15!23;CL:0000337!6.36e-15!23;CL:0000221!5.97e-12!44;CL:0000133!5.97e-12!44;CL:0002319!1.69e-11!43;CL:0000540!2.73e-10!33;CL:0000047!2.73e-10!33;CL:0000031!2.73e-10!33;CL:0000404!2.73e-10!33;CL:0000055!2.94e-08!50;CL:0000393!2.46e-07!39;CL:0000211!2.46e-07!39
|ontology_enrichment_celltype=CL:0000117!6.36e-15!23;CL:0000337!6.36e-15!23;CL:0000221!5.97e-12!44;CL:0000133!5.97e-12!44;CL:0002319!1.69e-11!43;CL:0000540!2.73e-10!33;CL:0000047!2.73e-10!33;CL:0000031!2.73e-10!33;CL:0000404!2.73e-10!33;CL:0000055!2.94e-08!50;CL:0000393!2.46e-07!39;CL:0000211!2.46e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-18,23;CL:0000337,4.37e-18,23;CL:0000221,9.63e-11,44;CL:0000133,9.63e-11,44;CL:0000540,1.10e-10,33;CL:0000047,1.10e-10,33;CL:0000031,1.10e-10,33;CL:0000404,1.10e-10,33;CL:0002319,3.09e-10,43;CL:0000393,9.72e-08,39;CL:0000211,9.72e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.72e-28!73;UBERON:0005743!1.72e-28!73;UBERON:0000073!2.44e-28!75;UBERON:0001016!2.44e-28!75;UBERON:0001049!4.48e-27!52;UBERON:0005068!4.48e-27!52;UBERON:0006241!4.48e-27!52;UBERON:0007135!4.48e-27!52;UBERON:0000033!4.84e-27!63;UBERON:0000955!1.90e-26!50;UBERON:0006238!1.90e-26!50;UBERON:0002616!1.46e-25!49;UBERON:0002346!8.29e-24!71;UBERON:0003075!8.29e-24!71;UBERON:0007284!8.29e-24!71;UBERON:0004121!3.01e-22!102;UBERON:0000924!3.01e-22!102;UBERON:0006601!3.01e-22!102;UBERON:0002020!8.54e-22!34;UBERON:0003056!1.90e-21!49;UBERON:0003080!6.60e-20!40;UBERON:0002780!4.32e-19!39;UBERON:0001890!4.32e-19!39;UBERON:0006240!4.32e-19!39;UBERON:0002791!1.37e-18!29;UBERON:0003528!1.37e-18!29;UBERON:0001893!1.37e-18!29;UBERON:0007811!9.14e-16!86;UBERON:0000153!8.24e-14!94;UBERON:0000956!2.60e-13!21;UBERON:0001869!2.60e-13!21;UBERON:0000203!2.60e-13!21;UBERON:0002619!3.06e-11!17;UBERON:0002021!3.56e-08!10;UBERON:0000411!3.56e-08!10;UBERON:0001950!3.56e-08!10;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.21e-32,54;UBERON:0001049,1.51e-29,52;UBERON:0005068,1.51e-29,52;UBERON:0006241,1.51e-29,52;UBERON:0007135,1.51e-29,52;UBERON:0001017,4.49e-29,73;UBERON:0002346,4.04e-28,64;UBERON:0003075,4.04e-28,64;UBERON:0007284,4.04e-28,64;UBERON:0001016,1.09e-27,75;UBERON:0002020,1.35e-26,34;UBERON:0000955,9.85e-26,47;UBERON:0006238,9.85e-26,47;UBERON:0002616,1.06e-24,46;UBERON:0004121,2.26e-24,95;UBERON:0000924,2.26e-24,95;UBERON:0006601,2.26e-24,95;UBERON:0010371,2.96e-24,73;UBERON:0003056,1.10e-22,49;UBERON:0003528,1.26e-22,29;UBERON:0002791,1.26e-22,29;UBERON:0001893,1.26e-22,29;UBERON:0003080,8.05e-22,40;UBERON:0002780,7.70e-21,39;UBERON:0001890,7.70e-21,39;UBERON:0006240,7.70e-21,39;UBERON:0000956,4.30e-16,21;UBERON:0001869,4.30e-16,21;UBERON:0000203,4.30e-16,21;UBERON:0010314,9.32e-16,92;UBERON:0002619,1.57e-13,17;UBERON:0002021,9.64e-10,10;UBERON:0000411,9.64e-10,10;UBERON:0001950,9.64e-10,10;UBERON:0003076,4.23e-08,12;UBERON:0003057,4.23e-08,12;UBERON:0002420,1.15e-07,8;UBERON:0007245,1.15e-07,8;UBERON:0010009,1.15e-07,8;UBERON:0010011,1.15e-07,8;UBERON:0000454,1.15e-07,8
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,4.41647031501533,4.11343300817216,8.06340338416257,46.9438961633905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,3.48840250208714,4.61340983742391,4.08302788055995,0.139986421625363,2.87505128729943,2.34895648480831,0.725362142011344,0,0,0,0,62.9204193273349,70.3558002431804,52.6080064910129,0,0.889294796111139,0,0,0,5.09320187881288,6.53171119046643,11.4058573539325,15.5256829081444,11.7781978356774,102.263052416562,114.630772753887,76.4342587101313,70.9256485534949,92.8410974476121,357.876613248013,253.714740775268,270.654711597501,70.5591639356537,54.9840738050482,64.0723445784815,225.021497195113,149.694854268427,173.120414731126,99.8790904755733,83.9992916714707,64.1214093639034,0.302904773332736,0.151143120213571,0,0,0,1.07940638327563,0,0,10.6737759300131,0,0,0,12.6759077799012,0,0,0,0,0,0,6.8510327831436,1.29468941823586,4.89859058913922,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,281.655126725108,274.165739218813,0,0,0,0,300.33023200667,350.445461759068,118.743362746657,231.186345855728,168.516486380688,284.877409091157,263.804293748174,2.74966282395854,0.746441823660558,0.505445516867349,18.9397670297827,0.130120442962704,0,0.360124259610698,3.0140963567143,10.4095843701532,11.914575986491,15.4607845523553,66.745469650666,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,193.887332576125,45.8954571211609,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,99.8624669724066,99.2782985435961,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,928.939925775444,0,0,0.162886959353576,0,0,0,0,0.754420319023592,1.18120757152309,1.84461088766356,2.32585463851399,3.27180356529755,1.78248689192361,1.58018378967908,0,0,0,1.44048875225048,1.29358683782755,1.71469628025274,0.354680467284547,0.713475270408282,0.329098041204242,3.04464949114599,1.64270195644597,0,0,0,0.322928853391811,0,0,0,0,70.4616147639937,0.683483523191411,0,0,0,1.23024804948923,0.915112692826091,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,95.4430614022842,107.716105342679,112.287520634122,169.790944155563,206.209838450963,210.754897371726,194.40648006676,202.644541450899,183.069533229619,237.651983094085,0.93408612825759,5.58634822761443,4.95127456686989,8.50873509739029,7.54607385460736,12.869045591501,9.33436256766784,8.24140228955577,8.02298023979538,6.57012750585873,10.6461305953901,9.24269072791773,9.92599979180754,8.45132011744274,7.52404643318534,11.9073422820768,10.3137050090921,9.83837024364896,9.06588981767275,9.86232764900462,7.88599280486455,7.98641127717019,9.77588378784016,10.61028841416,7.81107857447244,8.71530461284268,8.41468675214754,6.05060336307039,7.60503037536826,8.41713407486608,6.99946606932627,9.85044823755635,7.7753898202241,6.50734732981057,5.98010494041538,21.4837097026634,9.59119594626174,7.73535794573874,3.63447830930802,1.76473135295612,2.08681052058379
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,4.41647031501533,4.11343300817216,8.06340338416257,46.9438961633905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,3.48840250208714,4.61340983742391,4.08302788055995,0.139986421625363,2.87505128729943,2.34895648480831,0.725362142011344,0,0,0,0,62.9204193273349,70.3558002431804,52.6080064910129,0,0.889294796111139,0,0,0,5.09320187881288,6.53171119046643,11.4058573539325,15.5256829081444,11.7781978356774,102.263052416562,114.630772753887,76.4342587101313,70.9256485534949,92.8410974476121,357.876613248013,253.714740775268,270.654711597501,70.5591639356537,54.9840738050482,64.0723445784815,225.021497195113,149.694854268427,173.120414731126,99.8790904755733,83.9992916714707,64.1214093639034,0.302904773332736,0.151143120213571,0,0,0,1.07940638327563,0,0,10.6737759300131,0,0,0,12.6759077799012,0,0,0,0,0,0,6.8510327831436,1.29468941823586,4.89859058913922,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,281.655126725108,274.165739218813,0,0,0,0,300.33023200667,350.445461759068,118.743362746657,231.186345855728,168.516486380688,284.877409091157,263.804293748174,2.74966282395854,0.746441823660558,0.505445516867349,18.9397670297827,0.130120442962704,0,0.360124259610698,3.0140963567143,10.4095843701532,11.914575986491,15.4607845523553,66.745469650666,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,193.887332576125,45.8954571211609,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,99.8624669724066,99.2782985435961,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,928.939925775444,0,0,0.162886959353576,0,0,0,0,0.754420319023592,1.18120757152309,1.84461088766356,2.32585463851399,3.27180356529755,1.78248689192361,1.58018378967908,0,0,0,1.44048875225048,1.29358683782755,1.71469628025274,0.354680467284547,0.713475270408282,0.329098041204242,3.04464949114599,1.64270195644597,0,0,0,0.322928853391811,0,0,0,0,70.4616147639937,0.683483523191411,0,0,0,1.23024804948923,0.915112692826091,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,95.4430614022842,107.716105342679,112.287520634122,169.790944155563,206.209838450963,210.754897371726,194.40648006676,202.644541450899,183.069533229619,237.651983094085,0.93408612825759,5.58634822761443,4.95127456686989,8.50873509739029,7.54607385460736,12.869045591501,9.33436256766784,8.24140228955577,8.02298023979538,6.57012750585873,10.6461305953901,9.24269072791773,9.92599979180754,8.45132011744274,7.52404643318534,11.9073422820768,10.3137050090921,9.83837024364896,9.06588981767275,9.86232764900462,7.88599280486455,7.98641127717019,9.77588378784016,10.61028841416,7.81107857447244,8.71530461284268,8.41468675214754,6.05060336307039,7.60503037536826,8.41713407486608,6.99946606932627,9.85044823755635,7.7753898202241,6.50734732981057,5.98010494041538,21.4837097026634,9.59119594626174,7.73535794573874,3.63447830930802,1.76473135295612,2.08681052058379
|short_description=p1@Gad1
|short_description=p1@Gad1
}}
}}

Latest revision as of 22:01, 26 September 2015

Short description:p1@Gad1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gad1_5end
Coexpression cluster:MCL_coexpression_mm9:251
Association with transcript: 0bp_to_ENSMUST00000148210, ENSMUST00000155979, NM_008077, uc008jzj.1, uc008jzk.1_5end
EntrezGene:Gad1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Gad1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C362.92
Mouse Granule cells, donor2.CNhs12357.11731-123E370.36
Mouse Granule cells, donor3.CNhs12108.11636-122C752.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1102.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5114.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D276.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F270.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D692.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3357.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3253.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7270.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D470.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D864.07
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4225.02
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5149.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6173.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D699.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F684.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E164.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2281.66
cerebellum, neonate N30.CNhs11135.1395-42I2274.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4300.33
corpus striatum, adult.CNhs10487.19-21D8350.45
corpus striatum, neonate N00.CNhs11226.630-43F1118.74
cortex, adult.CNhs10473.12-14D5231.19
cortex, neonate N30.CNhs11107.1392-42F2168.52
diencephalon, adult.CNhs10482.20-12F2284.88
diencephalon, neonate N30.CNhs11201.1388-42B2263.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G418.94
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C610.41
eyeball, neonate N01.CNhs11140.1532-43E711.91
eyeball, neonate N02.CNhs11205.1551-44G815.46
eyeball, neonate N16.CNhs11188.777-19A266.75
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8193.89
hippocampus, neonate N00.CNhs11228.627-43G145.90
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C299.86
medulla oblongata, neonate N30.CNhs11200.1396-42A399.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I9928.94
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C970.46
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A195.44
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2107.72
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3112.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7169.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4206.21
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5210.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6194.41
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7202.64
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8183.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9237.65
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I521.48
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.37e-1823
neuroblast (sensu Vertebrata)4.37e-1823
ectodermal cell9.63e-1144
neurectodermal cell9.63e-1144
neuron1.10e-1033
neuronal stem cell1.10e-1033
neuroblast1.10e-1033
electrically signaling cell1.10e-1033
neural cell3.09e-1043
electrically responsive cell9.72e-0839
electrically active cell9.72e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.21e-3254
neural tube1.51e-2952
neural rod1.51e-2952
future spinal cord1.51e-2952
neural keel1.51e-2952
central nervous system4.49e-2973
neurectoderm4.04e-2864
neural plate4.04e-2864
presumptive neural plate4.04e-2864
nervous system1.09e-2775
gray matter1.35e-2634
brain9.85e-2647
future brain9.85e-2647
regional part of brain1.06e-2446
ectoderm-derived structure2.26e-2495
ectoderm2.26e-2495
presumptive ectoderm2.26e-2495
ecto-epithelium2.96e-2473
pre-chordal neural plate1.10e-2249
brain grey matter1.26e-2229
regional part of telencephalon1.26e-2229
telencephalon1.26e-2229
anterior neural tube8.05e-2240
regional part of forebrain7.70e-2139
forebrain7.70e-2139
future forebrain7.70e-2139
cerebral cortex4.30e-1621
cerebral hemisphere4.30e-1621
pallium4.30e-1621
structure with developmental contribution from neural crest9.32e-1692
regional part of cerebral cortex1.57e-1317
occipital lobe9.64e-1010
visual cortex9.64e-1010
neocortex9.64e-1010
posterior neural tube4.23e-0812
chordal neural plate4.23e-0812
basal ganglion1.15e-078
nuclear complex of neuraxis1.15e-078
aggregate regional part of brain1.15e-078
collection of basal ganglia1.15e-078
cerebral subcortex1.15e-078
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