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FFCP PHASE1:Mm9::chr5:144125569..144125598,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170935
|EntrezGene=170935
|HGNC=
|HGNC=
|MCL_coexpression_id=189
|TSSclassifier=NA
|UniProt=Q0QWG9
|UniProt=Q0QWG9
|association_with_transcript=0bp_to_ENSMUST00000010969,NM_133355,uc009ake.1_5end
|association_with_transcript=0bp_to_ENSMUST00000010969,NM_133355,uc009ake.1_5end
|cluster_id=chr5:144125569..144125598,+
|description=CAGE_peak_1_at_Grid2ip_5end
|description=CAGE_peak_1_at_Grid2ip_5end
|id=chr5:144125569..144125598,+
|id=chr5:144125569..144125598,+
|ontology_enrichment_celltype=CL:0002319!9.00e-14!43;CL:0000540!9.86e-14!33;CL:0000047!9.86e-14!33;CL:0000031!9.86e-14!33;CL:0000404!9.86e-14!33;CL:0000221!1.66e-13!44;CL:0000133!1.66e-13!44;CL:0000393!5.54e-11!39;CL:0000211!5.54e-11!39;CL:0000055!6.88e-11!50;CL:0000117!4.84e-09!23;CL:0000337!4.84e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.53e-11,33;CL:0000047,1.53e-11,33;CL:0000031,1.53e-11,33;CL:0000404,1.53e-11,33;CL:0002319,4.70e-11,43;CL:0000221,1.12e-10,44;CL:0000133,1.12e-10,44;CL:0000393,4.80e-09,39;CL:0000211,4.80e-09,39;CL:0000117,2.37e-07,23;CL:0000337,2.37e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.85e-29!102;UBERON:0000924!2.85e-29!102;UBERON:0006601!2.85e-29!102;UBERON:0001017!3.98e-29!73;UBERON:0005743!3.98e-29!73;UBERON:0000073!7.18e-28!75;UBERON:0001016!7.18e-28!75;UBERON:0002346!6.15e-26!71;UBERON:0003075!6.15e-26!71;UBERON:0007284!6.15e-26!71;UBERON:0000033!3.02e-19!63;UBERON:0001049!1.96e-18!52;UBERON:0005068!1.96e-18!52;UBERON:0006241!1.96e-18!52;UBERON:0007135!1.96e-18!52;UBERON:0000955!2.79e-18!50;UBERON:0006238!2.79e-18!50;UBERON:0002616!1.49e-17!49;UBERON:0003056!3.03e-14!49;UBERON:0002020!1.20e-12!34;UBERON:0003080!5.57e-12!40;UBERON:0002780!2.16e-11!39;UBERON:0001890!2.16e-11!39;UBERON:0006240!2.16e-11!39;UBERON:0000153!1.39e-10!94;UBERON:0002791!1.93e-10!29;UBERON:0003528!1.93e-10!29;UBERON:0001893!1.93e-10!29;UBERON:0007811!4.27e-09!86;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12;UBERON:0000468!5.38e-07!333;UBERON:0000025!7.78e-07!114;UBERON:0002619!9.19e-07!17;UBERON:0000956!9.92e-07!21;UBERON:0001869!9.92e-07!21;UBERON:0000203!9.92e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-27,73;UBERON:0001016,2.70e-26,75;UBERON:0004121,8.20e-21,95;UBERON:0000924,8.20e-21,95;UBERON:0006601,8.20e-21,95;UBERON:0000073,7.52e-19,54;UBERON:0002346,9.52e-17,64;UBERON:0003075,9.52e-17,64;UBERON:0007284,9.52e-17,64;UBERON:0001049,2.61e-16,52;UBERON:0005068,2.61e-16,52;UBERON:0006241,2.61e-16,52;UBERON:0007135,2.61e-16,52;UBERON:0010314,1.05e-14,92;UBERON:0003076,1.19e-13,12;UBERON:0003057,1.19e-13,12;UBERON:0010371,1.22e-13,73;UBERON:0000955,3.44e-13,47;UBERON:0006238,3.44e-13,47;UBERON:0002616,4.30e-12,46;UBERON:0002020,1.44e-09,34;UBERON:0004733,3.65e-09,6;UBERON:0004732,3.65e-09,6;UBERON:0002028,3.65e-09,6;UBERON:0007277,3.65e-09,6;UBERON:0003080,4.53e-07,40;UBERON:0003528,8.43e-07,29;UBERON:0002791,8.43e-07,29;UBERON:0001893,8.43e-07,29
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.540023753326763,0,1.71390590642282,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,7.70811166995721,16.7270412891596,12.4421291937557,0.923204014111357,1.55528994124096,0.52091337055676,1.67509799400829,2.8138130501584,0.763991238884051,1.17851434189467,1.42371680799103,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,1.63286352971307,0.693941307064543,1.82679286987285,1.38369298353635,1.05505848386836,0.940709657085638,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,2.24685959107234,4.57500602818627,1.88481528169297,2.9550134432687,2.30143911597297,19.9476522777178,15.7374025175725,0,0,0,0.631325567659422,0.520481771850815,0.229902104433473,0.360124259610698,0.452114453507145,1.02054748726992,0.896796041993948,0.937017245597288,1.55222022443409,1.72454394346274,1.32374256117473,1.05570674498369,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.710234206755631,1.37734962223183,0.308534225774757,0.930135779001631,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,2.10289948564127,1.3377599609307,0,0,2.34617075588757,0.928946687441754,0.515469845288373,0.605050573870028,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.339490171550376,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0,0,0,0,0,0,2.0871576698413,2.57865710502847,0,0,1.57754109708128,0.780877488593277,3.23135096599198,2.15071918157297,1.55959071857676,2.54768877709949,0.404810701674894,0.876767573733936,2.37172666767914,4.17717711348349,0,0.35613120733451,0.325773918707152,0,0,1.21390318077491,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0.169978429993855,0,0,0,1.10717597753397,0.406638934253697,0.108005340821801,0.418176592028937,0,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.515559547031063,2.05524755931193,3.0215755895588,0.675022500231806,0.900642406448441,0.906284817968409,3.62432218226274,0.31136204275253,1.59609949360412,1.36586884603307,0.486213434136588,0.419226325255965,0.735374033800057,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.631790158511746,0.476293691283074,0.695305955669133,0,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0,0.581385666529314,0.564656282491984,0,0.548783918618318,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.540023753326763,0,1.71390590642282,1.32521124570968,0.489963196859816,0.766763768145891,0.919218786610021,7.70811166995721,16.7270412891596,12.4421291937557,0.923204014111357,1.55528994124096,0.52091337055676,1.67509799400829,2.8138130501584,0.763991238884051,1.17851434189467,1.42371680799103,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,1.63286352971307,0.693941307064543,1.82679286987285,1.38369298353635,1.05505848386836,0.940709657085638,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,2.24685959107234,4.57500602818627,1.88481528169297,2.9550134432687,2.30143911597297,19.9476522777178,15.7374025175725,0,0,0,0.631325567659422,0.520481771850815,0.229902104433473,0.360124259610698,0.452114453507145,1.02054748726992,0.896796041993948,0.937017245597288,1.55222022443409,1.72454394346274,1.32374256117473,1.05570674498369,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.710234206755631,1.37734962223183,0.308534225774757,0.930135779001631,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,2.10289948564127,1.3377599609307,0,0,2.34617075588757,0.928946687441754,0.515469845288373,0.605050573870028,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.339490171550376,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0.44292937929755,0.637819074629948,0.327726629431476,0,0,0,0,0,0,2.0871576698413,2.57865710502847,0,0,1.57754109708128,0.780877488593277,3.23135096599198,2.15071918157297,1.55959071857676,2.54768877709949,0.404810701674894,0.876767573733936,2.37172666767914,4.17717711348349,0,0.35613120733451,0.325773918707152,0,0,1.21390318077491,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,3.33765543618917,0,0,0,0,0,0,0.169978429993855,0,0,0,1.10717597753397,0.406638934253697,0.108005340821801,0.418176592028937,0,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.515559547031063,2.05524755931193,3.0215755895588,0.675022500231806,0.900642406448441,0.906284817968409,3.62432218226274,0.31136204275253,1.59609949360412,1.36586884603307,0.486213434136588,0.419226325255965,0.735374033800057,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.631790158511746,0.476293691283074,0.695305955669133,0,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0,0.581385666529314,0.564656282491984,0,0.548783918618318,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0
|short_description=p1@Grid2ip
|short_description=p1@Grid2ip
}}
}}

Latest revision as of 16:58, 25 September 2015

Short description:p1@Grid2ip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grid2ip_5end
Coexpression cluster:MCL_coexpression_mm9:189
Association with transcript: 0bp_to_ENSMUST00000010969, NM_133355, uc009ake.1_5end
EntrezGene:Grid2ip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grid2ip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.53e-1133
neuronal stem cell1.53e-1133
neuroblast1.53e-1133
electrically signaling cell1.53e-1133
neural cell4.70e-1143
ectodermal cell1.12e-1044
neurectodermal cell1.12e-1044
electrically responsive cell4.80e-0939
electrically active cell4.80e-0939
CNS neuron (sensu Vertebrata)2.37e-0723
neuroblast (sensu Vertebrata)2.37e-0723

Uber anatomy
Ontology termp-valuen
central nervous system2.58e-2773
nervous system2.70e-2675
ectoderm-derived structure8.20e-2195
ectoderm8.20e-2195
presumptive ectoderm8.20e-2195
regional part of nervous system7.52e-1954
neurectoderm9.52e-1764
neural plate9.52e-1764
presumptive neural plate9.52e-1764
neural tube2.61e-1652
neural rod2.61e-1652
future spinal cord2.61e-1652
neural keel2.61e-1652
structure with developmental contribution from neural crest1.05e-1492
posterior neural tube1.19e-1312
chordal neural plate1.19e-1312
ecto-epithelium1.22e-1373
brain3.44e-1347
future brain3.44e-1347
regional part of brain4.30e-1246
gray matter1.44e-0934
segmental subdivision of hindbrain3.65e-096
segmental subdivision of nervous system3.65e-096
hindbrain3.65e-096
presumptive hindbrain3.65e-096
anterior neural tube4.53e-0740
brain grey matter8.43e-0729
regional part of telencephalon8.43e-0729
telencephalon8.43e-0729
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