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FFCP PHASE1:Mm9::chr5:138705241..138705288,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231807
|EntrezGene=231807
|HGNC=
|HGNC=
|MCL_coexpression_id=247
|TSSclassifier=NA
|UniProt=Q3UTZ3,E9Q2V5
|UniProt=Q3UTZ3,E9Q2V5
|association_with_transcript=0bp_to_ENSMUST00000110924,ENSMUST00000159534,ENSMUST00000161604,ENSMUST00000163268,ENSMUST00000170479,NM_153161,uc009afe.2,uc009aff.2_5end
|association_with_transcript=0bp_to_ENSMUST00000110924,ENSMUST00000159534,ENSMUST00000161604,ENSMUST00000163268,ENSMUST00000170479,NM_153161,uc009afe.2,uc009aff.2_5end
|cluster_id=chr5:138705241..138705288,-
|description=CAGE_peak_1_at_BC037034_5end
|description=CAGE_peak_1_at_BC037034_5end
|id=chr5:138705241..138705288,-
|id=chr5:138705241..138705288,-
|ontology_enrichment_celltype=CL:0000540!7.76e-15!33;CL:0000047!7.76e-15!33;CL:0000031!7.76e-15!33;CL:0000404!7.76e-15!33;CL:0000117!1.90e-13!23;CL:0000337!1.90e-13!23;CL:0002319!5.16e-11!43;CL:0000221!7.61e-11!44;CL:0000133!7.61e-11!44;CL:0000393!5.58e-10!39;CL:0000211!5.58e-10!39;CL:0000055!4.02e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.76e-15,33;CL:0000047,7.76e-15,33;CL:0000031,7.76e-15,33;CL:0000404,7.76e-15,33;CL:0000117,1.90e-13,23;CL:0000337,1.90e-13,23;CL:0002319,5.16e-11,43;CL:0000221,7.61e-11,44;CL:0000133,7.61e-11,44;CL:0000393,5.58e-10,39;CL:0000211,5.58e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.03e-21!73;UBERON:0005743!4.03e-21!73;UBERON:0000073!1.65e-20!75;UBERON:0001016!1.65e-20!75;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0002020!1.25e-14!34;UBERON:0000955!6.14e-14!50;UBERON:0006238!6.14e-14!50;UBERON:0002616!1.78e-13!49;UBERON:0004121!5.45e-13!102;UBERON:0000924!5.45e-13!102;UBERON:0006601!5.45e-13!102;UBERON:0007811!8.04e-13!86;UBERON:0002346!1.20e-12!71;UBERON:0003075!1.20e-12!71;UBERON:0007284!1.20e-12!71;UBERON:0000153!1.96e-12!94;UBERON:0002791!7.42e-12!29;UBERON:0003528!7.42e-12!29;UBERON:0001893!7.42e-12!29;UBERON:0003080!1.14e-11!40;UBERON:0002780!2.74e-11!39;UBERON:0001890!2.74e-11!39;UBERON:0006240!2.74e-11!39;UBERON:0000033!2.90e-11!63;UBERON:0003056!3.80e-10!49;UBERON:0000956!3.07e-08!21;UBERON:0001869!3.07e-08!21;UBERON:0000203!3.07e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.03e-21,73;UBERON:0001016,1.65e-20,75;UBERON:0000073,3.34e-16,54;UBERON:0001049,2.43e-15,52;UBERON:0005068,2.43e-15,52;UBERON:0006241,2.43e-15,52;UBERON:0007135,2.43e-15,52;UBERON:0002346,8.91e-15,64;UBERON:0003075,8.91e-15,64;UBERON:0007284,8.91e-15,64;UBERON:0002020,1.25e-14,34;UBERON:0004121,1.47e-14,95;UBERON:0000924,1.47e-14,95;UBERON:0006601,1.47e-14,95;UBERON:0000955,1.08e-12,47;UBERON:0006238,1.08e-12,47;UBERON:0002616,3.06e-12,46;UBERON:0003528,7.42e-12,29;UBERON:0002791,7.42e-12,29;UBERON:0001893,7.42e-12,29;UBERON:0003080,1.14e-11,40;UBERON:0002780,2.74e-11,39;UBERON:0001890,2.74e-11,39;UBERON:0006240,2.74e-11,39;UBERON:0010371,5.27e-11,73;UBERON:0003056,3.80e-10,49;UBERON:0000956,3.07e-08,21;UBERON:0001869,3.07e-08,21;UBERON:0000203,3.07e-08,21
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26379,13.8257237646257,9.61247533314031,8.57262013659322,10.0446779323242,6.87808166562586,7.19085064810423,9.6849698534091,5.96228877142247,9.32008969630389,23.1114104860518,11.2137409532984,9.10021697514037,13.2226808073952,6.84547064431975,10.9821481569006,8.21500670520278,9.37471570876441,16.7774951081137,27.0574215325127,18.7219504067613,20.2247117202034,14.3934902856017,15.4066435747241,15.200736288402,21.4832034800978,13.1129694155635,15.1446266395161,12.4059202826645,17.4671958410295,11.659641418215,14.0148397340208,17.8347921753747,18.7613091198642,12.3889516312463,6.12172035761071,5.77163478772568,4.75483440030221,5.54019234001459,8.50034213741638,9.94717119891265,14.4689783171139,12.0046292284277,6.01886524842436,28.2375921308533,26.2385384809091,33.227939779485,24.5750050751473,22.6077231524312,15.8632718451837,29.0259675099676,22.516060161211,21.7508356312418,30.0300980816056,9.75601067291261,21.5473431636557,22.1953687480374,18.9623239313269,13.8344687334468,11.3982975239009,9.55660929546946,13.3922787205281,14.1204452220399,14.6564382823003,12.1670063947315,10.9403278003924,13.7653015980727,12.4208795665446,13.8419480183028,12.859929664643,13.2108131577135,13.5036454324594,11.1263193216893,13.8366984926333,10.6289468239479,8.5188386956482,10.4911923576821,10.0289027476307,11.5754537910857,10.3229821627845,11.8903182367302,10.5227884575137,10.4569167661314,12.3451299764702,13.7616621024042,12.7070782264477,9.41231399290286,11.1554525653896,13.1176495467176,22.4829520144151,13.5680332898337,9.45432637812513,5.16478496585877,11.2501623750953,5.33296021926969
|phase1_expression=11.8510146857548,11.1672130444596,9.55498402718026,6.95667686005709,4.50806156951712,9.06548068324205,7.70921713965235,16.7860320474049,5.20918271961167,7.2560003159818,17.1217968225505,17.549874978974,21.4000912414007,20.6312149708834,18.3210368998615,9.71881283471165,14.6907994406911,16.4040325986284,13.8485577941796,19.0975343309114,12.8415368128115,17.5744983625567,15.9331871374751,5.91971964335605,7.79991555628378,10.3361753540704,4.73838195774982,7.54149314400612,6.65081968097309,5.54466285471848,7.98229838359097,16.5107975099504,22.7573971406291,15.8481681015439,8.37669697278696,8.14549762256613,9.59595974433135,51.8979222113766,28.9094077473806,33.5055196143231,60.5878432671945,56.692775251551,54.3771595394892,7.67970589651021,7.40051597902456,5.32285581268876,12.5182615095686,8.72100625521786,6.59058548203415,6.02732687130279,7.27929392451885,7.18762821824858,15.4359997573117,4.35217285206807,9.41062637598899,5.91696702882678,8.02293631828519,7.73508138416164,45.5212036934095,47.609188134483,55.1433321050376,4.74382344896785,10.6715375533337,70.6421278065898,70.2095117422552,83.8366535636398,31.4580116044325,24.2057532352579,30.4847460186924,34.6965261512445,27.552569937031,34.849420097264,23.412065340871,30.6226998037385,31.4373144939815,34.9303138911808,22.0231761998777,20.6853487698004,25.9595041203051,45.2369966914565,43.3651430675422,34.3802824567462,24.8472869111229,16.8828783009504,20.6277634498694,27.4004584490511,26.4811326286331,50.3278503728312,9.16286939331527,11.7891633766585,5.79728977403356,6.0229671388697,5.439770669662,7.01614149129162,6.49776417447669,2.68816132258401,8.84799846830037,4.26075806445144,4.1565760736459,5.65343319216544,11.5491604216878,2.56652954828636,7.64415719119937,28.4426681261332,6.71122227134764,6.84071636782766,8.08839112023653,6.8510327831436,7.50919862576798,11.4300447079915,8.67426633830679,12.7875500891099,10.1470818792666,11.3041980414467,6.23220147819235,8.04266184509923,14.8316980640624,4.62717942143717,22.1152637987469,7.44127509758082,11.2629174414801,15.5160081003271,9.31958806090611,18.737971008739,14.6612694769419,9.19645398750929,5.87094110079009,5.39912457894067,6.22644112658017,21.8694333531041,18.3000241127451,30.7853162676518,22.4233373048037,15.3429274398198,23.0644729461112,18.0087802005211,8.86002465497752,15.7996852674818,26.0304441186685,5.6819301089348,12.4915625244196,11.4951052216736,13.8647839950119,15.2211866014072,11.6342413548771,10.7615525039274,13.493048336601,10.3481348295606,12.0718076042392,14.7502742530899,14.4279921814438,15.7820927347854,11.6779844674751,13.9300866608867,6.37924622864625,14.3304672109315,4.21327912387941,8.23513302767089,6.81992398549422,10.9776659443816,11.4917769390737,8.4629168886677,12.5474709860161,10.6252685143598,7.86762275725629,7.20855228726264,6.70683503499048,3.50296027101508,5.75959474697182,3.94001913789829,3.24275238183423,2.48539978623065,3.95190207523891,2.41571553768669,21.449574753541,23.9767746843733,7.26921322564356,8.19796756656987,14.5036010363959,12.5407802804637,13.6599509001419,13.3111126251406,11.5636582799333,11.223311940641,13.2868137232463,7.08205505313247,11.3100843960121,10.1467800740987,10.7230247915516,8.08937467788799,6.70027954611552,7.56736838366595,14.9837641752935,10.0538691096561,19.1603150644237,11.4044743593376,14.3524840504043,7.29412526859313,9.10606134589305,3.69025369949005,7.22194148070324,4.19550357334122,4.44678940630723,14.181833985868,19.6558995113203,14.1663130802458,13.9973483758067,16.1588697034119,11.7127891819453,11.7955416354832,8.91743747262695,7.4131581560782,4.31304619582064,5.95425516269605,6.86482880852033,3.78868316920668,5.20252499213545,6.27176577772377,7.7596339869974,10.0430448238357,9.4519686336375,9.67546988918572,8.91822943496308,8.87783164441623,5.71304738126433,9.56154874503214,7.09358148477859,5.3151525515706,5.42146213435456,5.89907932976657,8.28887912956299,5.78596234326046,18.0949540727127,25.0196614556606,8.85175691434265,8.55403913544671,22.1559814183153,21.332526959781,2.78689407140348,2.7771801992481,16.0909191902291,19.1314984705353,23.4811503528751,16.4888470587261,21.8342700600746,25.1938112402061,14.9779959619711,15.4895604692995,11.4633455604492,23.7777774152137,10.5035663054119,13.5329858787114,8.79589580509311,10.8880281161873,18.5843193675948,8.98288353773431,12.09294227859,9.24164890803901,13.2885851796348,12.2974059177571,7.75284879504663,6.90714086007261,6.06045543254026,11.6933600436252,13.7044191147498,11.3449097573006,12.2558258071364,13.1444598642856,17.5927809944546,14.5749183821483,15.0739198595933,12.664186049747,9.54384319492302,6.69822888052118,12.6722722354404,9.32061111800809,10.8058915046931,7.09010887648364,5.00539722757307,7.90099316558842,7.63983001620073,7.05805868903763,7.57850175237612,22.4364615432717,19.1375386493595,10.5257302661243,15.9267293537952,14.5043711893612,14.4895881384287,13.9554685655979,2.37969801991397,3.91864066506242,2.21119958087078,10.5013767981662,16.1331356726379,13.8257237646257,9.61247533314031,8.57262013659322,10.0446779323242,6.87808166562586,7.19085064810423,9.6849698534091,5.96228877142247,9.32008969630389,23.1114104860518,11.2137409532984,9.10021697514037,13.2226808073952,6.84547064431975,10.9821481569006,8.21500670520278,9.37471570876441,16.7774951081137,27.0574215325127,18.7219504067613,20.2247117202034,14.3934902856017,15.4066435747241,15.200736288402,21.4832034800978,13.1129694155635,15.1446266395161,12.4059202826645,17.4671958410295,11.659641418215,14.0148397340208,17.8347921753747,18.7613091198642,12.3889516312463,6.12172035761071,5.77163478772568,4.75483440030221,5.54019234001459,8.50034213741638,9.94717119891265,14.4689783171139,12.0046292284277,6.01886524842436,28.2375921308533,26.2385384809091,33.227939779485,24.5750050751473,22.6077231524312,15.8632718451837,29.0259675099676,22.516060161211,21.7508356312418,30.0300980816056,9.75601067291261,21.5473431636557,22.1953687480374,18.9623239313269,13.8344687334468,11.3982975239009,9.55660929546946,13.3922787205281,14.1204452220399,14.6564382823003,12.1670063947315,10.9403278003924,13.7653015980727,12.4208795665446,13.8419480183028,12.859929664643,13.2108131577135,13.5036454324594,11.1263193216893,13.8366984926333,10.6289468239479,8.5188386956482,10.4911923576821,10.0289027476307,11.5754537910857,10.3229821627845,11.8903182367302,10.5227884575137,10.4569167661314,12.3451299764702,13.7616621024042,12.7070782264477,9.41231399290286,11.1554525653896,13.1176495467176,22.4829520144151,13.5680332898337,9.45432637812513,5.16478496585877,11.2501623750953,5.33296021926969
|short_description=p1@BC037034
|short_description=p1@BC037034
}}
}}

Latest revision as of 15:25, 25 September 2015

Short description:p1@BC037034
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_BC037034_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 0bp_to_ENSMUST00000110924, ENSMUST00000159534, ENSMUST00000161604, ENSMUST00000163268, ENSMUST00000170479, NM_153161, uc009afe.2, uc009aff.2_5end
EntrezGene:BC037034
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@BC037034

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G851.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H333.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G960.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H454.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C345.52
Mouse Granule cells, donor2.CNhs12357.11731-123E347.61
Mouse Granule cells, donor3.CNhs12108.11636-122C755.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C770.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E770.21
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D283.84
Mouse Microglia, donor1.CNhs12629.11718-123C831.46
Mouse Microglia, donor2.CNhs12634.11736-123E824.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E150.33
Mouse Schwann, donor1.CNhs12507.11728-123D99.16
Mouse Schwann, donor2.CNhs12573.11746-123F911.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I38.04
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F130.79
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B218.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.80
epididymis, adult.CNhs10490.58-23B226.03
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C612.49
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C913.86
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C611.63
eyeball, neonate N01.CNhs11140.1532-43E710.76
eyeball, neonate N02.CNhs11205.1551-44G813.49
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E212.07
forelimb, embryo E12.CNhs10600.359-14H214.75
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A815.78
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E910.98
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G123.98
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I514.50
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I914.98
kidney, embryo E15.CNhs10997.434-16F810.05
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C714.35
kidney, neonate N00.CNhs11214.646-21G77.29
kidney, neonate N10.CNhs11206.758-6D59.11
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H619.66
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D714.00
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F48.92
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C59.68
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A68.88
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.02
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C222.16
medulla oblongata, neonate N30.CNhs11200.1396-42A321.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D821.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I923.78
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H713.53
ovary, neonate N00.CNhs11217.1299-22I48.80
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E613.14
pituitary gland, embryo E13.CNhs11009.370-44C717.59
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B915.07
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I712.67
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F810.81
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I57.64
skin, neonate N10.CNhs11108.762-6C47.06
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G219.14
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F215.93
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G313.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E316.13
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D49.61
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B78.22
testis, neonate N07.CNhs11222.726-26I49.37
testis, neonate N10.CNhs11204.763-44D916.78
testis, neonate N20.CNhs11110.839-18H327.06
testis, neonate N30.CNhs11130.1391-42E218.72
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I414.39
thymus, embryo E15.CNhs11005.430-45I215.41
thymus, embryo E16.CNhs11002.456-26C515.20
thymus, embryo E17.CNhs10581.478-18C121.48
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F815.14
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C417.47
thymus, neonate N07.CNhs11211.713-19D311.66
thymus, neonate N10.CNhs11194.748-24E414.01
thymus, neonate N20.CNhs11186.820-7A217.83
thymus, neonate N25.CNhs11125.1362-25G718.76
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I89.76
whole body, embryo E12.CNhs10587.857-27C921.55
whole body, embryo E13.CNhs10512.372-23H222.20
whole body, embryo E14.5.CNhs10578.420-27D218.96
whole body, embryo E14.CNhs10519.395-14B113.83
whole body, embryo E16.CNhs10514.453-14F211.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F913.12
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.76e-1533
neuronal stem cell7.76e-1533
neuroblast7.76e-1533
electrically signaling cell7.76e-1533
CNS neuron (sensu Vertebrata)1.90e-1323
neuroblast (sensu Vertebrata)1.90e-1323
neural cell5.16e-1143
ectodermal cell7.61e-1144
neurectodermal cell7.61e-1144
electrically responsive cell5.58e-1039
electrically active cell5.58e-1039

Uber anatomy
Ontology termp-valuen
central nervous system4.03e-2173
nervous system1.65e-2075
regional part of nervous system3.34e-1654
neural tube2.43e-1552
neural rod2.43e-1552
future spinal cord2.43e-1552
neural keel2.43e-1552
neurectoderm8.91e-1564
neural plate8.91e-1564
presumptive neural plate8.91e-1564
gray matter1.25e-1434
ectoderm-derived structure1.47e-1495
ectoderm1.47e-1495
presumptive ectoderm1.47e-1495
brain1.08e-1247
future brain1.08e-1247
regional part of brain3.06e-1246
brain grey matter7.42e-1229
regional part of telencephalon7.42e-1229
telencephalon7.42e-1229
anterior neural tube1.14e-1140
regional part of forebrain2.74e-1139
forebrain2.74e-1139
future forebrain2.74e-1139
ecto-epithelium5.27e-1173
pre-chordal neural plate3.80e-1049
cerebral cortex3.07e-0821
cerebral hemisphere3.07e-0821
pallium3.07e-0821
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