FFCP PHASE1:Mm9::chr5:138199361..138199441,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78829 | |EntrezGene=78829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZZ4,F6VXN4 | |UniProt=D3YZZ4,F6VXN4 | ||
|association_with_transcript=0bp_to_ENSMUST00000110985,ENSMUST00000141733_5end | |association_with_transcript=0bp_to_ENSMUST00000110985,ENSMUST00000141733_5end | ||
|cluster_id=chr5:138199361..138199441,+ | |||
|description=CAGE_peak_2_at_Tsc22d4_5end | |description=CAGE_peak_2_at_Tsc22d4_5end | ||
|id=chr5:138199361..138199441,+ | |id=chr5:138199361..138199441,+ | ||
|ontology_enrichment_celltype=CL:0000221!9.54e-20!44;CL:0000133!9.54e-20!44;CL:0002319!4.82e-19!43;CL:0000055!5.23e-15!50;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0000393!4.76e-10!39;CL:0000211!4.76e-10!39;CL:0000117!1.32e-08!23;CL:0000337!1.32e-08!23;CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.37e-22,44;CL:0000133,3.37e-22,44;CL:0002319,2.12e-21,43;CL:0000540,3.19e-14,33;CL:0000047,3.19e-14,33;CL:0000031,3.19e-14,33;CL:0000404,3.19e-14,33;CL:0000393,1.41e-11,39;CL:0000211,1.41e-11,39;CL:0000117,1.49e-09,23;CL:0000337,1.49e-09,23;CL:0000333,2.25e-08,10;CL:0000095,2.25e-08,10;CL:0000243,2.25e-08,10;CL:0000123,2.25e-08,10;CL:0000125,2.25e-08,10;CL:0000030,2.25e-08,10;CL:0000339,2.25e-08,10;CL:0002321,4.05e-08,70;CL:0002453,2.65e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.37e-31!75;UBERON:0001016!1.37e-31!75;UBERON:0001017!2.46e-30!73;UBERON:0005743!2.46e-30!73;UBERON:0004121!6.12e-29!102;UBERON:0000924!6.12e-29!102;UBERON:0006601!6.12e-29!102;UBERON:0002346!1.48e-19!71;UBERON:0003075!1.48e-19!71;UBERON:0007284!1.48e-19!71;UBERON:0001049!2.11e-19!52;UBERON:0005068!2.11e-19!52;UBERON:0006241!2.11e-19!52;UBERON:0007135!2.11e-19!52;UBERON:0000955!4.32e-18!50;UBERON:0006238!4.32e-18!50;UBERON:0000033!1.26e-17!63;UBERON:0002616!1.46e-17!49;UBERON:0002020!2.76e-15!34;UBERON:0002791!1.88e-12!29;UBERON:0003528!1.88e-12!29;UBERON:0001893!1.88e-12!29;UBERON:0003080!3.93e-12!40;UBERON:0002780!1.51e-11!39;UBERON:0001890!1.51e-11!39;UBERON:0006240!1.51e-11!39;UBERON:0003056!1.58e-11!49;UBERON:0000956!5.17e-09!21;UBERON:0001869!5.17e-09!21;UBERON:0000203!5.17e-09!21;UBERON:0003076!1.36e-08!12;UBERON:0003057!1.36e-08!12;UBERON:0007811!1.75e-08!86;UBERON:0002619!2.33e-08!17;UBERON:0004111!9.36e-07!122;UBERON:0000153!9.75e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-35,75;UBERON:0001017,2.79e-34,73;UBERON:0004121,3.75e-31,95;UBERON:0000924,3.75e-31,95;UBERON:0006601,3.75e-31,95;UBERON:0000073,3.82e-23,54;UBERON:0001049,7.45e-22,52;UBERON:0005068,7.45e-22,52;UBERON:0006241,7.45e-22,52;UBERON:0007135,7.45e-22,52;UBERON:0002346,1.37e-21,64;UBERON:0003075,1.37e-21,64;UBERON:0007284,1.37e-21,64;UBERON:0010371,8.53e-21,73;UBERON:0010314,2.30e-20,92;UBERON:0000955,2.50e-18,47;UBERON:0006238,2.50e-18,47;UBERON:0002616,9.62e-18,46;UBERON:0002020,3.91e-17,34;UBERON:0003528,6.44e-14,29;UBERON:0002791,6.44e-14,29;UBERON:0001893,6.44e-14,29;UBERON:0003080,1.35e-13,40;UBERON:0002780,6.25e-13,39;UBERON:0001890,6.25e-13,39;UBERON:0006240,6.25e-13,39;UBERON:0003056,2.41e-12,49;UBERON:0000956,5.12e-10,21;UBERON:0001869,5.12e-10,21;UBERON:0000203,5.12e-10,21;UBERON:0003076,1.53e-09,12;UBERON:0003057,1.53e-09,12;UBERON:0002619,2.83e-09,17;UBERON:0004111,2.32e-07,122;UBERON:0000025,4.51e-07,114;UBERON:0002021,6.39e-07,10;UBERON:0000411,6.39e-07,10;UBERON:0001950,6.39e-07,10 | |||
|phase1_expression=25.9441132309766,0,0,0,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,26.788636397587,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,103.275657453941,186.847559018043,234.624843160416,230.010570604877,116.608689213927,225.691526053005,0,0,0,0.257259436035947,1.71920063963254,36.6127185516984,4.24864567805155,3.70293685490423,3.1691570175309,4.74382344896785,11.5608323494448,0,0.988866362566974,0.7104801149461,228.295284215024,552.505923052395,2.69592992002042,2.16009501330705,6.30974884054146,260.513697776269,253.998822094356,2.32732518508413,2.87536413054709,3.67687514644008,158.56686863912,112.747919529221,127.800635669195,5.14356522147756,4.94033275453012,4.68822033501084,171.418361386848,162.075631689124,144.241545901309,113.137376821888,95.389026135399,15.2847545576746,159.403636966352,34.3094882884806,0.869593466105033,0,0,0,0,0,8.84799846830037,0,0,0,221.405855888942,0,0,0,0,0,0,4.22480354960522,1.03575153458869,0.742210695324124,0.346970653532272,3.65358573974569,2.99800146432876,3.61734337326294,2.58695155698551,1.13099932196708,0,1.15679485535929,0,4.20593809863264,1.32504911076236,0.969750506270444,0,124.724619526919,183.6847618754,0.255457055208591,0,0,0,175.554629382452,182.085239921813,24.6282530141214,109.509321721134,126.067720463853,179.113294410341,172.94918643023,3.56437773476107,35.0827657120462,129.899497834909,8.83855794723191,0,0.229902104433473,0.180062129805349,0.90422890701429,1.90502197623718,4.09963904911519,6.8402258928602,40.8751325767645,0,0,0,0.219195732427575,0,0.696504333044333,1.85203922767149,0,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.771335564436891,0.697601834251224,1.07309360559848,1.75148013550754,8.55711219550098,10.9992200932994,19.8618583387347,32.0177972461478,17.564009223284,21.0704077453784,100.518595413653,20.1693040263397,0,1.05780226665418,0,0,0.38660238396628,1.21010114774006,2.00140239460383,1.14135375667535,1.42358718463353,1.97638745668813,0.502670417600539,2.58643413653496,1.75467678407208,0,0.648414149624083,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0.339490171550376,0.938760993154008,0.502518772325447,1.19021820443007,2.14647012643579,1.26108115284953,0.44292937929755,0.637819074629948,3.60499292374624,2.41758974612254,1.15719246865209,0,0,0.491764273019036,0.275936746304732,213.211183503788,277.440062163745,0,7.82659874333556,11.042787679569,14.055794794679,38.7762115919038,53.2900419434191,59.0416486318344,46.4245510493685,45.3387985875882,35.65521466518,34.7853244592941,92.5405391294804,0.141940085208269,0.712262414669021,0.651547837414304,0,0,0,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,1.81766864738753,1.42598951353889,2.21225730555071,0,0,0.340439605753788,0,0.129358683782755,0,1.24138163549592,5.17269571046005,10.0374902567294,21.0080814889074,0,0,2.20528398054962,1.31909002353184,0.968786560175433,1.38719727334758,2.38744688006273,3.11867709515616,0.874442509889552,251.807560130272,0.854354403989263,0.206386867963223,0,0,0.820165366326151,0.228778173206523,0,0,0,0.954670618015114,0,1.01659733563424,0.756037385752609,1.88179466413022,2.83871332870031,2.69728692769641,1.40510874733071,3.40282724579238,1.16653475962614,0,1.69107881605257,0.299033092087958,0.165458490457098,0,0.774958940866387,0.506868376472335,1.17357238645754,4.4269490846943,3.77493639932559,1.69108884578204,3.74439008135225,0.632022241256357,0.810900861160657,0.616265742988964,0,0.358053391334963,0.198681354781265,0.721172697119813,0.147689527174577,0.706765149637033,0.762068066549998,0.403304740547362,0.584747284438515,0.0962118416403295,0,3.17422537061296,0,0,0,1.9318959403219,0,0,0.428736758158132,0,96.5725650875184,111.859032471244,109.423043066925,101.393377582776,100.022047886514,88.381085994595,81.0027000278167,50.4359747611127,74.7684974823938,69.3798817747439,0,0,1.19513524027894,2.91728060481953,2.93458427679175,5.51530525350042,4.00044110042907,3.91466608753899,4.1719497246936,3.03236654116557,3.54871019846336,3.58390048633545,4.30750934361459,4.92993673517493,3.4461281373368,2.85776214769844,2.66533949673168,3.27945674788299,2.47251540481984,2.64958056241915,4.80016953339582,3.37204031702741,2.38436189947321,4.36039249896986,3.3879376949519,4.06150117880047,5.67076715905595,2.10455769150274,5.16055632614275,5.05028044491965,3.91495559809775,3.94017929502254,0.409231043169689,3.40861050609125,3.66522560864169,11.9909077410214,5.38042699424439,7.73535794573874,10.5208582637864,25.1474217796248,19.4768981921154 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|phase1_expression=25.9441132309766,0,0,0,0.500895729946347,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,26.788636397587,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,103.275657453941,186.847559018043,234.624843160416,230.010570604877,116.608689213927,225.691526053005,0,0,0,0.257259436035947,1.71920063963254,36.6127185516984,4.24864567805155,3.70293685490423,3.1691570175309,4.74382344896785,11.5608323494448,0,0.988866362566974,0.7104801149461,228.295284215024,552.505923052395,2.69592992002042,2.16009501330705,6.30974884054146,260.513697776269,253.998822094356,2.32732518508413,2.87536413054709,3.67687514644008,158.56686863912,112.747919529221,127.800635669195,5.14356522147756,4.94033275453012,4.68822033501084,171.418361386848,162.075631689124,144.241545901309,113.137376821888,95.389026135399,15.2847545576746,159.403636966352,34.3094882884806,0.869593466105033,0,0,0,0,0,8.84799846830037,0,0,0,221.405855888942,0,0,0,0,0,0,4.22480354960522,1.03575153458869,0.742210695324124,0.346970653532272,3.65358573974569,2.99800146432876,3.61734337326294,2.58695155698551,1.13099932196708,0,1.15679485535929,0,4.20593809863264,1.32504911076236,0.969750506270444,0,124.724619526919,183.6847618754,0.255457055208591,0,0,0,175.554629382452,182.085239921813,24.6282530141214,109.509321721134,126.067720463853,179.113294410341,172.94918643023,3.56437773476107,35.0827657120462,129.899497834909,8.83855794723191,0,0.229902104433473,0.180062129805349,0.90422890701429,1.90502197623718,4.09963904911519,6.8402258928602,40.8751325767645,0,0,0,0.219195732427575,0,0.696504333044333,1.85203922767149,0,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.771335564436891,0.697601834251224,1.07309360559848,1.75148013550754,8.55711219550098,10.9992200932994,19.8618583387347,32.0177972461478,17.564009223284,21.0704077453784,100.518595413653,20.1693040263397,0,1.05780226665418,0,0,0.38660238396628,1.21010114774006,2.00140239460383,1.14135375667535,1.42358718463353,1.97638745668813,0.502670417600539,2.58643413653496,1.75467678407208,0,0.648414149624083,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0.339490171550376,0.938760993154008,0.502518772325447,1.19021820443007,2.14647012643579,1.26108115284953,0.44292937929755,0.637819074629948,3.60499292374624,2.41758974612254,1.15719246865209,0,0,0.491764273019036,0.275936746304732,213.211183503788,277.440062163745,0,7.82659874333556,11.042787679569,14.055794794679,38.7762115919038,53.2900419434191,59.0416486318344,46.4245510493685,45.3387985875882,35.65521466518,34.7853244592941,92.5405391294804,0.141940085208269,0.712262414669021,0.651547837414304,0,0,0,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,1.81766864738753,1.42598951353889,2.21225730555071,0,0,0.340439605753788,0,0.129358683782755,0,1.24138163549592,5.17269571046005,10.0374902567294,21.0080814889074,0,0,2.20528398054962,1.31909002353184,0.968786560175433,1.38719727334758,2.38744688006273,3.11867709515616,0.874442509889552,251.807560130272,0.854354403989263,0.206386867963223,0,0,0.820165366326151,0.228778173206523,0,0,0,0.954670618015114,0,1.01659733563424,0.756037385752609,1.88179466413022,2.83871332870031,2.69728692769641,1.40510874733071,3.40282724579238,1.16653475962614,0,1.69107881605257,0.299033092087958,0.165458490457098,0,0.774958940866387,0.506868376472335,1.17357238645754,4.4269490846943,3.77493639932559,1.69108884578204,3.74439008135225,0.632022241256357,0.810900861160657,0.616265742988964,0,0.358053391334963,0.198681354781265,0.721172697119813,0.147689527174577,0.706765149637033,0.762068066549998,0.403304740547362,0.584747284438515,0.0962118416403295,0,3.17422537061296,0,0,0,1.9318959403219,0,0,0.428736758158132,0,96.5725650875184,111.859032471244,109.423043066925,101.393377582776,100.022047886514,88.381085994595,81.0027000278167,50.4359747611127,74.7684974823938,69.3798817747439,0,0,1.19513524027894,2.91728060481953,2.93458427679175,5.51530525350042,4.00044110042907,3.91466608753899,4.1719497246936,3.03236654116557,3.54871019846336,3.58390048633545,4.30750934361459,4.92993673517493,3.4461281373368,2.85776214769844,2.66533949673168,3.27945674788299,2.47251540481984,2.64958056241915,4.80016953339582,3.37204031702741,2.38436189947321,4.36039249896986,3.3879376949519,4.06150117880047,5.67076715905595,2.10455769150274,5.16055632614275,5.05028044491965,3.91495559809775,3.94017929502254,0.409231043169689,3.40861050609125,3.66522560864169,11.9909077410214,5.38042699424439,7.73535794573874,10.5208582637864,25.1474217796248,19.4768981921154 | ||
|short_description=p2@Tsc22d4 | |short_description=p2@Tsc22d4 | ||
}} | }} |
Latest revision as of 15:02, 25 September 2015
Short description: | p2@Tsc22d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tsc22d4_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 0bp_to_ENSMUST00000110985, ENSMUST00000141733_5end |
EntrezGene: | Tsc22d4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.37e-22 | 44 |
neurectodermal cell | 3.37e-22 | 44 |
neural cell | 2.12e-21 | 43 |
neuron | 3.19e-14 | 33 |
neuronal stem cell | 3.19e-14 | 33 |
neuroblast | 3.19e-14 | 33 |
electrically signaling cell | 3.19e-14 | 33 |
electrically responsive cell | 1.41e-11 | 39 |
electrically active cell | 1.41e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.49e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.49e-09 | 23 |
migratory neural crest cell | 2.25e-08 | 10 |
neuron associated cell | 2.25e-08 | 10 |
glial cell (sensu Vertebrata) | 2.25e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.25e-08 | 10 |
glial cell | 2.25e-08 | 10 |
glioblast | 2.25e-08 | 10 |
glioblast (sensu Vertebrata) | 2.25e-08 | 10 |
embryonic cell | 4.05e-08 | 70 |
oligodendrocyte precursor cell | 2.65e-07 | 8 |