FFCP PHASE1:Mm9::chr12:120147396..120147399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120147396..120147399,- | |||
|description=CAGE_peak_at_chr12:120147396..120147399,- | |description=CAGE_peak_at_chr12:120147396..120147399,- | ||
|id=chr12:120147396..120147399,- | |id=chr12:120147396..120147399,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!5.38e-27!16;UBERON:0000079!5.38e-27!16;UBERON:0003135!2.53e-23!15;UBERON:0004176!3.33e-20!17;UBERON:0009196!3.33e-20!17;UBERON:0009117!3.33e-20!17;UBERON:0000473!1.28e-19!14;UBERON:0005156!1.81e-19!26;UBERON:0000990!1.81e-19!26;UBERON:0000991!5.16e-19!18;UBERON:0005564!5.16e-19!18;UBERON:0003133!1.95e-17!24;UBERON:0001301!2.68e-14!3;UBERON:0006555!2.68e-14!3;UBERON:0005103!2.68e-14!3;UBERON:0000083!2.68e-14!3;UBERON:0009201!2.68e-14!3;UBERON:0004819!2.68e-14!3;UBERON:0006553!2.68e-14!3;UBERON:0003074!2.68e-14!3;UBERON:0003060!2.68e-14!3;UBERON:0000080!7.44e-11!4;UBERON:0005904!7.44e-11!4;UBERON:0006947!7.44e-11!4;UBERON:0002120!7.44e-11!4;UBERON:0004054!7.44e-11!4;UBERON:0004875!7.44e-11!4;UBERON:0004876!7.44e-11!4;UBERON:0005721!7.44e-11!4;UBERON:0005754!7.44e-11!4;UBERON:0007297!7.44e-11!4;UBERON:0003886!1.87e-10!38;UBERON:0002553!3.79e-10!39;UBERON:0001343!9.54e-10!2;UBERON:0004910!9.54e-10!2;UBERON:0004909!9.54e-10!2;UBERON:0005154!9.54e-10!2;UBERON:0005295!9.54e-10!2;UBERON:0005297!9.54e-10!2;UBERON:0005294!9.54e-10!2;UBERON:0010141!9.54e-10!2;UBERON:0005891!9.54e-10!2;UBERON:0004122!1.27e-08!5;UBERON:0002323!1.34e-08!37;UBERON:0004458!1.34e-08!37;UBERON:0003064!6.27e-08!14;UBERON:0000058!2.17e-07!6;UBERON:0004871!8.98e-07!3 | |ontology_enrichment_uberon=UBERON:0003101!5.38e-27!16;UBERON:0000079!5.38e-27!16;UBERON:0003135!2.53e-23!15;UBERON:0004176!3.33e-20!17;UBERON:0009196!3.33e-20!17;UBERON:0009117!3.33e-20!17;UBERON:0000473!1.28e-19!14;UBERON:0005156!1.81e-19!26;UBERON:0000990!1.81e-19!26;UBERON:0000991!5.16e-19!18;UBERON:0005564!5.16e-19!18;UBERON:0003133!1.95e-17!24;UBERON:0001301!2.68e-14!3;UBERON:0006555!2.68e-14!3;UBERON:0005103!2.68e-14!3;UBERON:0000083!2.68e-14!3;UBERON:0009201!2.68e-14!3;UBERON:0004819!2.68e-14!3;UBERON:0006553!2.68e-14!3;UBERON:0003074!2.68e-14!3;UBERON:0003060!2.68e-14!3;UBERON:0000080!7.44e-11!4;UBERON:0005904!7.44e-11!4;UBERON:0006947!7.44e-11!4;UBERON:0002120!7.44e-11!4;UBERON:0004054!7.44e-11!4;UBERON:0004875!7.44e-11!4;UBERON:0004876!7.44e-11!4;UBERON:0005721!7.44e-11!4;UBERON:0005754!7.44e-11!4;UBERON:0007297!7.44e-11!4;UBERON:0003886!1.87e-10!38;UBERON:0002553!3.79e-10!39;UBERON:0001343!9.54e-10!2;UBERON:0004910!9.54e-10!2;UBERON:0004909!9.54e-10!2;UBERON:0005154!9.54e-10!2;UBERON:0005295!9.54e-10!2;UBERON:0005297!9.54e-10!2;UBERON:0005294!9.54e-10!2;UBERON:0010141!9.54e-10!2;UBERON:0005891!9.54e-10!2;UBERON:0004122!1.27e-08!5;UBERON:0002323!1.34e-08!37;UBERON:0004458!1.34e-08!37;UBERON:0003064!6.27e-08!14;UBERON:0000058!2.17e-07!6;UBERON:0004871!8.98e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.61e-30,3;UBERON:0006555,5.61e-30,3;UBERON:0005103,5.61e-30,3;UBERON:0000083,5.61e-30,3;UBERON:0009201,5.61e-30,3;UBERON:0004819,5.61e-30,3;UBERON:0006553,5.61e-30,3;UBERON:0003074,5.61e-30,3;UBERON:0003060,5.61e-30,3;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,5.30717792710717,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,5.30717792710717,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:120147396..120147399,- | |short_description=p@chr12:120147396..120147399,- | ||
}} | }} |
Latest revision as of 20:46, 4 August 2015
Short description: | p@chr12:120147396..120147399, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:120147396..120147399, - |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 5.61e-30 | 3 |
excretory tube | 5.61e-30 | 3 |
mesonephric epithelium | 5.61e-30 | 3 |
mesonephric tubule | 5.61e-30 | 3 |
nephric duct | 5.61e-30 | 3 |
kidney epithelium | 5.61e-30 | 3 |
renal duct | 5.61e-30 | 3 |
mesonephric duct | 5.61e-30 | 3 |
pronephric duct | 5.61e-30 | 3 |
mesonephros | 6.52e-23 | 4 |
duct of male reproductive system | 6.52e-23 | 4 |
male genital duct | 6.52e-23 | 4 |
pronephros | 6.52e-23 | 4 |
internal male genitalia | 6.52e-23 | 4 |
nephrogenic cord | 6.52e-23 | 4 |
urogenital ridge | 6.52e-23 | 4 |
pronephric mesoderm | 6.52e-23 | 4 |
rostral part of nephrogenic cord | 6.52e-23 | 4 |
presumptive pronephric mesoderm | 6.52e-23 | 4 |
duct | 8.67e-14 | 7 |
internal genitalia | 4.56e-11 | 9 |
intraembryonic coelom | 4.12e-10 | 10 |
kidney | 1.22e-07 | 14 |
kidney mesenchyme | 1.22e-07 | 14 |
upper urinary tract | 1.22e-07 | 14 |
intermediate mesoderm | 1.22e-07 | 14 |
kidney rudiment | 1.22e-07 | 14 |
kidney field | 1.22e-07 | 14 |
male reproductive organ | 3.18e-07 | 15 |
male organism | 7.35e-07 | 16 |
male reproductive system | 7.35e-07 | 16 |