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FFCP PHASE1:Mm9::chr2:32596972..32597019,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27387
|EntrezGene=27387
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=A2AK86
|UniProt=A2AK86
|association_with_transcript=0bp_to_ENSMUST00000131101,ENSMUST00000139563_5end
|association_with_transcript=0bp_to_ENSMUST00000131101,ENSMUST00000139563_5end
|cluster_id=chr2:32596972..32597019,+
|description=CAGE_peak_3_at_Sh2d3c_5end
|description=CAGE_peak_3_at_Sh2d3c_5end
|id=chr2:32596972..32597019,+
|id=chr2:32596972..32597019,+
|ontology_enrichment_celltype=CL:0000540!6.95e-18!33;CL:0000047!6.95e-18!33;CL:0000031!6.95e-18!33;CL:0000404!6.95e-18!33;CL:0000117!5.74e-15!23;CL:0000337!5.74e-15!23;CL:0002319!1.48e-13!43;CL:0000221!2.28e-13!44;CL:0000133!2.28e-13!44;CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000055!2.43e-09!50
|ontology_enrichment_celltype=CL:0000540!6.95e-18!33;CL:0000047!6.95e-18!33;CL:0000031!6.95e-18!33;CL:0000404!6.95e-18!33;CL:0000117!5.74e-15!23;CL:0000337!5.74e-15!23;CL:0002319!1.48e-13!43;CL:0000221!2.28e-13!44;CL:0000133!2.28e-13!44;CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000055!2.43e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.16e-20,33;CL:0000047,1.16e-20,33;CL:0000031,1.16e-20,33;CL:0000404,1.16e-20,33;CL:0000117,6.82e-18,23;CL:0000337,6.82e-18,23;CL:0000393,2.83e-15,39;CL:0000211,2.83e-15,39;CL:0002319,4.64e-14,43;CL:0000221,2.01e-13,44;CL:0000133,2.01e-13,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.16e-31!73;UBERON:0005743!7.16e-31!73;UBERON:0000073!1.56e-30!75;UBERON:0001016!1.56e-30!75;UBERON:0002346!5.10e-29!71;UBERON:0003075!5.10e-29!71;UBERON:0007284!5.10e-29!71;UBERON:0004121!5.84e-29!102;UBERON:0000924!5.84e-29!102;UBERON:0006601!5.84e-29!102;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.05e-24!52;UBERON:0005068!5.05e-24!52;UBERON:0006241!5.05e-24!52;UBERON:0007135!5.05e-24!52;UBERON:0000955!1.96e-22!50;UBERON:0006238!1.96e-22!50;UBERON:0003056!5.31e-22!49;UBERON:0002616!6.56e-22!49;UBERON:0002020!1.01e-19!34;UBERON:0003080!8.58e-19!40;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0002791!2.11e-16!29;UBERON:0003528!2.11e-16!29;UBERON:0001893!2.11e-16!29;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0007811!1.88e-11!86;UBERON:0000153!1.64e-10!94;UBERON:0002619!1.55e-09!17;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000468!4.52e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-35,73;UBERON:0001016,1.00e-33,75;UBERON:0002346,7.91e-33,64;UBERON:0003075,7.91e-33,64;UBERON:0007284,7.91e-33,64;UBERON:0004121,3.60e-31,95;UBERON:0000924,3.60e-31,95;UBERON:0006601,3.60e-31,95;UBERON:0000073,7.16e-29,54;UBERON:0001049,3.19e-27,52;UBERON:0005068,3.19e-27,52;UBERON:0006241,3.19e-27,52;UBERON:0007135,3.19e-27,52;UBERON:0010371,1.35e-25,73;UBERON:0003056,6.16e-25,49;UBERON:0000955,6.27e-23,47;UBERON:0006238,6.27e-23,47;UBERON:0002020,1.45e-22,34;UBERON:0002616,2.60e-22,46;UBERON:0010314,5.04e-21,92;UBERON:0003080,5.06e-21,40;UBERON:0002780,2.50e-20,39;UBERON:0001890,2.50e-20,39;UBERON:0006240,2.50e-20,39;UBERON:0003528,1.51e-18,29;UBERON:0002791,1.51e-18,29;UBERON:0001893,1.51e-18,29;UBERON:0000956,8.96e-13,21;UBERON:0001869,8.96e-13,21;UBERON:0000203,8.96e-13,21;UBERON:0002619,2.97e-10,17;UBERON:0002021,1.29e-09,10;UBERON:0000411,1.29e-09,10;UBERON:0001950,1.29e-09,10;UBERON:0002420,4.93e-07,8;UBERON:0007245,4.93e-07,8;UBERON:0010009,4.93e-07,8;UBERON:0010011,4.93e-07,8;UBERON:0000454,4.93e-07,8
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0,0,0.286533439938757,0,27.5150386769053,26.9785399428737,20.9164363157039,0,0,0,0,0,1.19840044207362,1.92109152660777,14.6202353354953,17.1457541681247,12.6194976810829,26.5655415495537,18.5529574399355,16.2912762955889,17.1563393122643,19.3035945188104,27.5289702498472,17.3654779795855,22.1193407888991,29.4106421638332,31.929187617241,25.5247551572812,20.1011759280994,12.380777420697,18.6413862287708,26.8112012781038,24.7726724590439,25.1639251864156,0.454357159999104,0.604572480854284,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,2.08182392119363,4.87144765299426,1.61430848079241,2.86373017049983,2.11659672844269,0.125666591329675,0,0.144599356919912,0,0,0,0,0,30.4492028892009,26.5997317653088,0,0,0,0,18.1246673679835,10.980014467647,20.6073137465098,23.292458905765,24.0372529890511,17.0386196538839,15.7374025175725,2.24046600470696,0,0,1.05220927943237,3.513251959993,5.51765050640335,7.56260945182467,7.23383125611432,6.32739442107349,10.6334387836425,11.4316103962869,2.84573707812917,0.215567992932842,0.378212160335639,1.23165786914764,1.09597866213787,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,1.65700618028402,2.11073453982987,0.900310307305074,0.946978942340841,0.590292695242212,0.154267112887378,0.930135779001631,1.07309360559848,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0,10.0939175310781,15.1269780197548,0,0,1.70630600428187,1.62565670302307,2.83508414908605,1.61346819698674,1.55664630691409,0.570676878337677,0,1.15289268306808,1.25667604400135,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.420814919341911,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0.975668239288994,0.788175720530955,0.44292937929755,0.637819074629948,0,0,0.144649058581512,0,0,0,0,19.5871719785106,16.5268478095006,0,0,2.83957397474631,3.90438744296638,7.53981892064796,4.77937595905104,4.23317480756549,7.07691326972081,7.2865926301481,8.18316402151673,8.30104333687699,11.2462460747632,0.567760340833074,1.42452482933804,0.977321756121456,1.31976098378028,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,2.70091641046965,4.39819524861365,1.50035924522115,2.6601035046341,2.14042581122485,2.63278432963394,4.26250928760439,0,0.42366414172764,0.441056796109924,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,22.8073121472927,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,0.972048067396211,0.209088296014469,1.09181281873089,1.07891477107857,1.32245529160537,0,0,1.24267862617385,0,0,0,0.388902376688095,1.6790777052105,0.675824501963113,2.34714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.576060012515731,0,1.41907650703115,0.410843828659309,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,3.32978930061097,0.717710852875806,0.839423081820392,0.579568782096571,0,0.36630324853453,0.214368379079066,0,33.885110557024,21.6352861158373,20.6242384838183,21.1379414282736,26.718218271055,25.6833925112498,32.4010800111267,34.674732648265,30.8136838109259,33.6544202638683,3.84013186061454,5.58634822761443,3.24393850932855,6.07766792670735,4.82110274044359,3.67687016900028,3.11145418922261,2.88449080134452,2.88827288632634,5.81203587056734,2.5347929989024,2.45214243801899,2.99652823903624,3.84150914429216,3.56099907524802,5.23923060411381,3.1288768005111,3.8581844092741,3.29668720642645,4.41596760403192,3.08582327146874,3.19456451086807,2.62279808942053,2.47088908274958,4.14081273827455,3.38458431566706,4.024415403201,4.47218509444333,2.30866993537965,1.12228454331548,2.84724043498018,3.64466584789585,2.45538625901814,2.94379998253335,2.70069255373598,9.99242311751784,3.04111090979031,3.65280791882107,2.29545998482612,1.10295709559758,1.15933917810211
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0,0,0.286533439938757,0,27.5150386769053,26.9785399428737,20.9164363157039,0,0,0,0,0,1.19840044207362,1.92109152660777,14.6202353354953,17.1457541681247,12.6194976810829,26.5655415495537,18.5529574399355,16.2912762955889,17.1563393122643,19.3035945188104,27.5289702498472,17.3654779795855,22.1193407888991,29.4106421638332,31.929187617241,25.5247551572812,20.1011759280994,12.380777420697,18.6413862287708,26.8112012781038,24.7726724590439,25.1639251864156,0.454357159999104,0.604572480854284,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,2.08182392119363,4.87144765299426,1.61430848079241,2.86373017049983,2.11659672844269,0.125666591329675,0,0.144599356919912,0,0,0,0,0,30.4492028892009,26.5997317653088,0,0,0,0,18.1246673679835,10.980014467647,20.6073137465098,23.292458905765,24.0372529890511,17.0386196538839,15.7374025175725,2.24046600470696,0,0,1.05220927943237,3.513251959993,5.51765050640335,7.56260945182467,7.23383125611432,6.32739442107349,10.6334387836425,11.4316103962869,2.84573707812917,0.215567992932842,0.378212160335639,1.23165786914764,1.09597866213787,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,1.65700618028402,2.11073453982987,0.900310307305074,0.946978942340841,0.590292695242212,0.154267112887378,0.930135779001631,1.07309360559848,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0,10.0939175310781,15.1269780197548,0,0,1.70630600428187,1.62565670302307,2.83508414908605,1.61346819698674,1.55664630691409,0.570676878337677,0,1.15289268306808,1.25667604400135,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.420814919341911,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0.975668239288994,0.788175720530955,0.44292937929755,0.637819074629948,0,0,0.144649058581512,0,0,0,0,19.5871719785106,16.5268478095006,0,0,2.83957397474631,3.90438744296638,7.53981892064796,4.77937595905104,4.23317480756549,7.07691326972081,7.2865926301481,8.18316402151673,8.30104333687699,11.2462460747632,0.567760340833074,1.42452482933804,0.977321756121456,1.31976098378028,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,2.70091641046965,4.39819524861365,1.50035924522115,2.6601035046341,2.14042581122485,2.63278432963394,4.26250928760439,0,0.42366414172764,0.441056796109924,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,22.8073121472927,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,0.972048067396211,0.209088296014469,1.09181281873089,1.07891477107857,1.32245529160537,0,0,1.24267862617385,0,0,0,0.388902376688095,1.6790777052105,0.675824501963113,2.34714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.576060012515731,0,1.41907650703115,0.410843828659309,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,3.32978930061097,0.717710852875806,0.839423081820392,0.579568782096571,0,0.36630324853453,0.214368379079066,0,33.885110557024,21.6352861158373,20.6242384838183,21.1379414282736,26.718218271055,25.6833925112498,32.4010800111267,34.674732648265,30.8136838109259,33.6544202638683,3.84013186061454,5.58634822761443,3.24393850932855,6.07766792670735,4.82110274044359,3.67687016900028,3.11145418922261,2.88449080134452,2.88827288632634,5.81203587056734,2.5347929989024,2.45214243801899,2.99652823903624,3.84150914429216,3.56099907524802,5.23923060411381,3.1288768005111,3.8581844092741,3.29668720642645,4.41596760403192,3.08582327146874,3.19456451086807,2.62279808942053,2.47088908274958,4.14081273827455,3.38458431566706,4.024415403201,4.47218509444333,2.30866993537965,1.12228454331548,2.84724043498018,3.64466584789585,2.45538625901814,2.94379998253335,2.70069255373598,9.99242311751784,3.04111090979031,3.65280791882107,2.29545998482612,1.10295709559758,1.15933917810211
|short_description=p3@Sh2d3c
|short_description=p3@Sh2d3c
}}
}}

Latest revision as of 14:43, 26 September 2015

Short description:p3@Sh2d3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sh2d3c_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000131101, ENSMUST00000139563_5end
EntrezGene:Sh2d3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sh2d3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C327.52
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B230.45
cerebellum, neonate N30.CNhs11135.1395-42I226.60
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.12
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F120.61
cortex, adult.CNhs10473.12-14D523.29
cortex, neonate N30.CNhs11107.1392-42F224.04
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D47.23
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G811.43
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G115.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C219.59
medulla oblongata, neonate N30.CNhs11200.1396-42A316.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C922.81
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.16e-2033
neuronal stem cell1.16e-2033
neuroblast1.16e-2033
electrically signaling cell1.16e-2033
CNS neuron (sensu Vertebrata)6.82e-1823
neuroblast (sensu Vertebrata)6.82e-1823
electrically responsive cell2.83e-1539
electrically active cell2.83e-1539
neural cell4.64e-1443
ectodermal cell2.01e-1344
neurectodermal cell2.01e-1344

Uber anatomy
Ontology termp-valuen
central nervous system1.91e-3573
nervous system1.00e-3375
neurectoderm7.91e-3364
neural plate7.91e-3364
presumptive neural plate7.91e-3364
ectoderm-derived structure3.60e-3195
ectoderm3.60e-3195
presumptive ectoderm3.60e-3195
regional part of nervous system7.16e-2954
neural tube3.19e-2752
neural rod3.19e-2752
future spinal cord3.19e-2752
neural keel3.19e-2752
ecto-epithelium1.35e-2573
pre-chordal neural plate6.16e-2549
brain6.27e-2347
future brain6.27e-2347
gray matter1.45e-2234
regional part of brain2.60e-2246
structure with developmental contribution from neural crest5.04e-2192
anterior neural tube5.06e-2140
regional part of forebrain2.50e-2039
forebrain2.50e-2039
future forebrain2.50e-2039
brain grey matter1.51e-1829
regional part of telencephalon1.51e-1829
telencephalon1.51e-1829
cerebral cortex8.96e-1321
cerebral hemisphere8.96e-1321
pallium8.96e-1321
regional part of cerebral cortex2.97e-1017
occipital lobe1.29e-0910
visual cortex1.29e-0910
neocortex1.29e-0910
basal ganglion4.93e-078
nuclear complex of neuraxis4.93e-078
aggregate regional part of brain4.93e-078
collection of basal ganglia4.93e-078
cerebral subcortex4.93e-078
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