FFCP PHASE1:Mm9::chr2:28438759..28438794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70239 | |EntrezGene=70239 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R2T8 | |UniProt=Q8R2T8 | ||
|association_with_transcript=0bp_to_ENSMUST00000028157_5end | |association_with_transcript=0bp_to_ENSMUST00000028157_5end | ||
|cluster_id=chr2:28438759..28438794,- | |||
|description=CAGE_peak_2_at_Gtf3c5_5end | |description=CAGE_peak_2_at_Gtf3c5_5end | ||
|id=chr2:28438759..28438794,- | |id=chr2:28438759..28438794,- | ||
|ontology_enrichment_celltype=CL:0000540!1.71e-09!33;CL:0000047!1.71e-09!33;CL:0000031!1.71e-09!33;CL:0000404!1.71e-09!33;CL:0002319!3.29e-08!43;CL:0000221!3.70e-08!44;CL:0000133!3.70e-08!44;CL:0000117!5.10e-07!23;CL:0000337!5.10e-07!23 | |ontology_enrichment_celltype=CL:0000540!1.71e-09!33;CL:0000047!1.71e-09!33;CL:0000031!1.71e-09!33;CL:0000404!1.71e-09!33;CL:0002319!3.29e-08!43;CL:0000221!3.70e-08!44;CL:0000133!3.70e-08!44;CL:0000117!5.10e-07!23;CL:0000337!5.10e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-09,33;CL:0000047,1.67e-09,33;CL:0000031,1.67e-09,33;CL:0000404,1.67e-09,33;CL:0002319,3.22e-08,43;CL:0000221,3.63e-08,44;CL:0000133,3.63e-08,44;CL:0000117,5.01e-07,23;CL:0000337,5.01e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.47e-11!102;UBERON:0000924!4.47e-11!102;UBERON:0006601!4.47e-11!102;UBERON:0001017!2.61e-10!73;UBERON:0005743!2.61e-10!73;UBERON:0002346!3.01e-10!71;UBERON:0003075!3.01e-10!71;UBERON:0007284!3.01e-10!71;UBERON:0000073!6.18e-10!75;UBERON:0001016!6.18e-10!75;UBERON:0003056!1.99e-08!49;UBERON:0000033!2.00e-07!63;UBERON:0001049!3.60e-07!52;UBERON:0005068!3.60e-07!52;UBERON:0006241!3.60e-07!52;UBERON:0007135!3.60e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.25e-10,92;UBERON:0001017,2.43e-10,73;UBERON:0004121,3.50e-10,95;UBERON:0000924,3.50e-10,95;UBERON:0006601,3.50e-10,95;UBERON:0001016,5.77e-10,75;UBERON:0002346,1.71e-09,64;UBERON:0003075,1.71e-09,64;UBERON:0007284,1.71e-09,64;UBERON:0010371,9.46e-09,73;UBERON:0003056,1.86e-08,49;UBERON:0001049,3.39e-07,52;UBERON:0005068,3.39e-07,52;UBERON:0006241,3.39e-07,52;UBERON:0007135,3.39e-07,52 | |||
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|short_description=p2@Gtf3c5 | |short_description=p2@Gtf3c5 | ||
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Latest revision as of 12:14, 26 September 2015
Short description: | p2@Gtf3c5 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gtf3c5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028157_5end |
EntrezGene: | Gtf3c5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-09 | 33 |
neuronal stem cell | 1.67e-09 | 33 |
neuroblast | 1.67e-09 | 33 |
electrically signaling cell | 1.67e-09 | 33 |
neural cell | 3.22e-08 | 43 |
ectodermal cell | 3.63e-08 | 44 |
neurectodermal cell | 3.63e-08 | 44 |
CNS neuron (sensu Vertebrata) | 5.01e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.01e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.25e-10 | 92 |
central nervous system | 2.43e-10 | 73 |
ectoderm-derived structure | 3.50e-10 | 95 |
ectoderm | 3.50e-10 | 95 |
presumptive ectoderm | 3.50e-10 | 95 |
nervous system | 5.77e-10 | 75 |
neurectoderm | 1.71e-09 | 64 |
neural plate | 1.71e-09 | 64 |
presumptive neural plate | 1.71e-09 | 64 |
ecto-epithelium | 9.46e-09 | 73 |
pre-chordal neural plate | 1.86e-08 | 49 |
neural tube | 3.39e-07 | 52 |
neural rod | 3.39e-07 | 52 |
future spinal cord | 3.39e-07 | 52 |
neural keel | 3.39e-07 | 52 |