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FFCP PHASE1:Mm9::chr5:107788625..107788637,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=114642
|EntrezGene=114642
|HGNC=
|HGNC=
|MCL_coexpression_id=113
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-153bp_to_uc008ymd.1_5end
|association_with_transcript=-153bp_to_uc008ymd.1_5end
|cluster_id=chr5:107788625..107788637,+
|description=CAGE_peak_3_at_Brdt_5end
|description=CAGE_peak_3_at_Brdt_5end
|id=chr5:107788625..107788637,+
|id=chr5:107788625..107788637,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.70e-12!86;UBERON:0000153!2.59e-12!94;UBERON:0002020!1.58e-08!34;UBERON:0000033!5.33e-08!63;UBERON:0002021!7.83e-08!10;UBERON:0000411!7.83e-08!10;UBERON:0001950!7.83e-08!10;UBERON:0002346!1.25e-07!71;UBERON:0003075!1.25e-07!71;UBERON:0007284!1.25e-07!71;UBERON:0000475!1.39e-07!200;UBERON:0001049!2.75e-07!52;UBERON:0005068!2.75e-07!52;UBERON:0006241!2.75e-07!52;UBERON:0007135!2.75e-07!52;UBERON:0004121!3.67e-07!102;UBERON:0000924!3.67e-07!102;UBERON:0006601!3.67e-07!102;UBERON:0002791!8.99e-07!29;UBERON:0003528!8.99e-07!29;UBERON:0001893!8.99e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.61e-11,54;UBERON:0002021,1.33e-10,10;UBERON:0000411,1.33e-10,10;UBERON:0001950,1.33e-10,10;UBERON:0002020,2.40e-10,34;UBERON:0001049,1.01e-09,52;UBERON:0005068,1.01e-09,52;UBERON:0006241,1.01e-09,52;UBERON:0007135,1.01e-09,52;UBERON:0010371,7.22e-09,73;UBERON:0003528,2.08e-08,29;UBERON:0002791,2.08e-08,29;UBERON:0001893,2.08e-08,29;UBERON:0006562,2.59e-08,24;UBERON:0001557,2.59e-08,24;UBERON:0001042,2.59e-08,24;UBERON:0008814,2.59e-08,24;UBERON:0009145,2.59e-08,24;UBERON:0002346,4.47e-08,64;UBERON:0003075,4.47e-08,64;UBERON:0007284,4.47e-08,64;UBERON:0002370,4.55e-08,23;UBERON:0000974,4.55e-08,23;UBERON:0004807,4.55e-08,23;UBERON:0005058,4.55e-08,23;UBERON:0003351,4.55e-08,23;UBERON:0009113,4.55e-08,23;UBERON:0003295,4.55e-08,23;UBERON:0009722,4.55e-08,23;UBERON:0005562,4.55e-08,23;UBERON:0007690,4.55e-08,23;UBERON:0001017,1.16e-07,73;UBERON:0007811,1.55e-07,36;UBERON:0003408,1.72e-07,24;UBERON:0002616,1.79e-07,46;UBERON:0004121,3.51e-07,95;UBERON:0000924,3.51e-07,95;UBERON:0006601,3.51e-07,95;UBERON:0003080,3.63e-07,40;UBERON:0001016,3.75e-07,75;UBERON:0000955,3.91e-07,47;UBERON:0006238,3.91e-07,47;UBERON:0002619,4.27e-07,17;UBERON:0000956,6.60e-07,21;UBERON:0001869,6.60e-07,21;UBERON:0000203,6.60e-07,21;UBERON:0000153,9.49e-07,43;UBERON:0000072,9.89e-07,27
|phase1_expression=1.92178616525753,0.348975407639361,0,0,1.50268718983904,0.16787927191189,0,1.54947988129892,0.563154888606667,1.17032263160997,0,0.0797721589953364,4.96482116800497,2.79745287740792,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,1.44573593256819,0,0,0,0.68822784320151,1.14846392823004,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.612508068787107,0,0.7813353445238,0.523523743973798,0,0,0,1.00717454380462,0.608261587317087,0.917733760808408,0,0,0,0,0,0,0.335565212115473,2.17608642603403,0.672187598284928,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,0,1.97773272513395,0,0.599200221036809,3.45796474789399,0.622137673850866,0.945041568321835,1.26194976810829,2.28520787523043,3.09215957332259,0.734944795289724,0.383381884072945,0,2.20231761998777,3.31987079021488,3.07213066512487,0.527545150920775,0.548925861614458,1.04182674111352,1.3959149950069,2.25105044012672,2.75036845998258,3.24091444021034,2.13557521198654,0.745597783301202,0.151452386666368,0.226714680320357,2.31891590961342,0,0,1.61910957491345,1.29955283489534,0,0.702222100658759,0.170430322578058,0.519572009205738,0,2.53518155598025,1.28326477414318,0,0,0,0,0.505524445014783,0.68510327831436,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.904335843315735,1.88141931417128,0.879666139307728,0.247194967734374,0.578397427679647,0,1.45590164952668,0.662524555381181,1.45462575940567,0,0.585561594023094,2.72280718857492,0.255457055208591,0.479260498023681,0,0.254140454146129,2.09706895166752,1.83000241127451,1.38219787324151,3.47648640384553,4.85859368927628,2.0778804455956,3.24482526135515,0.81471491080253,0.497627882440372,0,0.631325567659422,0.130120442962704,1.83921683546778,1.0803727788321,0.753524089178575,1.08858398642125,0.768682321709099,0.937017245597288,1.03481348295606,0.862271971731369,0.756424320671277,1.05570674498369,1.31517439456545,0.556094498451196,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.700592054203017,0.493679549740441,1.14917224855367,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,5.46753866266731,1.64647379806855,0,0.528901133327089,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0,1.00534083520108,1.1937388322469,0.19496408711912,0,0,0.796565093017469,0.189667900953082,0.342745537829186,2.25415471346161,0,0.193952487167626,0.701358198903186,0.632365371242573,0.738050739898011,0.627994911365499,0.616985819609003,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0,0.274561413188081,2.87536413054709,1.11642284300551,1.24815069245824,0.757736633841335,0.717589654087649,0,0.369506380333209,0.37898282354097,0.651859905768103,0.509235257325564,0.234690248288502,1.00503754465089,1.19021820443007,0.780534591431195,0.472905432318573,2.21464689648775,0.318909537314974,0.655453258862952,0.345369963731791,1.3018415272336,0,0,0.491764273019036,0,1.9266070798535,1.87538698547525,1.63934945376675,2.52470927204373,0.94652465824877,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0,1.95464351224291,1.64970122972535,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,1.07021290561242,0.164549020602121,0.913394847343798,0.23467170806371,0,0,0.16488625294148,2.09903754704677,1.56813604813205,0.954978752025092,1.14898629821543,0,2.03967832211561,0.170870880797853,1.44470807574256,1.11116716421827,0.188368457004691,0.27338845544205,0.457556346413045,1.01987057996313,0.559805809294632,2.07299960706636,0,0.158167996790568,0.406638934253697,0.108005340821801,0.836353184057875,0.218362563746178,0.674321731924103,0.247960367176008,0.523511883968059,1.03691978633434,0.621339313086926,0.56369293868419,0.149516546043979,0.66183396182839,0.972255941720238,0.774958940866387,0.675824501963113,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,0,3.16011120628178,0.405450430580328,1.54066435747241,1.42912905275575,1.25318686967237,3.57626438606277,3.12508168751919,2.80610101631697,4.94735604745923,4.57240839929999,3.32726410951574,3.50848370663109,5.96513418170043,8.18138315270983,1.13365191807606,0,0.0897138566094757,0,0.19318959403219,1.50145980360946,2.01466786693992,0.214368379079066,1.50471631210609,4.51801474093653,5.06357760157895,5.15605962095457,6.70227411140382,3.42541259885321,5.2877572817279,2.70009000092722,4.5032120322422,7.70342095273148,6.73088405277366,0.726511433089237,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|phase1_expression=1.92178616525753,0.348975407639361,0,0,1.50268718983904,0.16787927191189,0,1.54947988129892,0.563154888606667,1.17032263160997,0,0.0797721589953364,4.96482116800497,2.79745287740792,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,1.44573593256819,0,0,0,0.68822784320151,1.14846392823004,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.612508068787107,0,0.7813353445238,0.523523743973798,0,0,0,1.00717454380462,0.608261587317087,0.917733760808408,0,0,0,0,0,0,0.335565212115473,2.17608642603403,0.672187598284928,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,0,1.97773272513395,0,0.599200221036809,3.45796474789399,0.622137673850866,0.945041568321835,1.26194976810829,2.28520787523043,3.09215957332259,0.734944795289724,0.383381884072945,0,2.20231761998777,3.31987079021488,3.07213066512487,0.527545150920775,0.548925861614458,1.04182674111352,1.3959149950069,2.25105044012672,2.75036845998258,3.24091444021034,2.13557521198654,0.745597783301202,0.151452386666368,0.226714680320357,2.31891590961342,0,0,1.61910957491345,1.29955283489534,0,0.702222100658759,0.170430322578058,0.519572009205738,0,2.53518155598025,1.28326477414318,0,0,0,0,0.505524445014783,0.68510327831436,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.904335843315735,1.88141931417128,0.879666139307728,0.247194967734374,0.578397427679647,0,1.45590164952668,0.662524555381181,1.45462575940567,0,0.585561594023094,2.72280718857492,0.255457055208591,0.479260498023681,0,0.254140454146129,2.09706895166752,1.83000241127451,1.38219787324151,3.47648640384553,4.85859368927628,2.0778804455956,3.24482526135515,0.81471491080253,0.497627882440372,0,0.631325567659422,0.130120442962704,1.83921683546778,1.0803727788321,0.753524089178575,1.08858398642125,0.768682321709099,0.937017245597288,1.03481348295606,0.862271971731369,0.756424320671277,1.05570674498369,1.31517439456545,0.556094498451196,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.700592054203017,0.493679549740441,1.14917224855367,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,5.46753866266731,1.64647379806855,0,0.528901133327089,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0,1.00534083520108,1.1937388322469,0.19496408711912,0,0,0.796565093017469,0.189667900953082,0.342745537829186,2.25415471346161,0,0.193952487167626,0.701358198903186,0.632365371242573,0.738050739898011,0.627994911365499,0.616985819609003,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0,0,0,0.274561413188081,2.87536413054709,1.11642284300551,1.24815069245824,0.757736633841335,0.717589654087649,0,0.369506380333209,0.37898282354097,0.651859905768103,0.509235257325564,0.234690248288502,1.00503754465089,1.19021820443007,0.780534591431195,0.472905432318573,2.21464689648775,0.318909537314974,0.655453258862952,0.345369963731791,1.3018415272336,0,0,0.491764273019036,0,1.9266070798535,1.87538698547525,1.63934945376675,2.52470927204373,0.94652465824877,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0,1.95464351224291,1.64970122972535,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,1.07021290561242,0.164549020602121,0.913394847343798,0.23467170806371,0,0,0.16488625294148,2.09903754704677,1.56813604813205,0.954978752025092,1.14898629821543,0,2.03967832211561,0.170870880797853,1.44470807574256,1.11116716421827,0.188368457004691,0.27338845544205,0.457556346413045,1.01987057996313,0.559805809294632,2.07299960706636,0,0.158167996790568,0.406638934253697,0.108005340821801,0.836353184057875,0.218362563746178,0.674321731924103,0.247960367176008,0.523511883968059,1.03691978633434,0.621339313086926,0.56369293868419,0.149516546043979,0.66183396182839,0.972255941720238,0.774958940866387,0.675824501963113,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,0,3.16011120628178,0.405450430580328,1.54066435747241,1.42912905275575,1.25318686967237,3.57626438606277,3.12508168751919,2.80610101631697,4.94735604745923,4.57240839929999,3.32726410951574,3.50848370663109,5.96513418170043,8.18138315270983,1.13365191807606,0,0.0897138566094757,0,0.19318959403219,1.50145980360946,2.01466786693992,0.214368379079066,1.50471631210609,4.51801474093653,5.06357760157895,5.15605962095457,6.70227411140382,3.42541259885321,5.2877572817279,2.70009000092722,4.5032120322422,7.70342095273148,6.73088405277366,0.726511433089237,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|short_description=p3@Brdt
|short_description=p3@Brdt
}}
}}

Latest revision as of 14:01, 1 October 2015

Short description:p3@Brdt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Brdt_5end
Coexpression cluster:MCL_coexpression_mm9:113
Association with transcript: -153bp_to_uc008ymd.1_5end
EntrezGene:Brdt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Brdt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C44.95
thymus, neonate N07.CNhs11211.713-19D34.57
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G28.18
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.61e-1154
occipital lobe1.33e-1010
visual cortex1.33e-1010
neocortex1.33e-1010
gray matter2.40e-1034
neural tube1.01e-0952
neural rod1.01e-0952
future spinal cord1.01e-0952
neural keel1.01e-0952
ecto-epithelium7.22e-0973
brain grey matter2.08e-0829
regional part of telencephalon2.08e-0829
telencephalon2.08e-0829
pharynx2.59e-0824
upper respiratory tract2.59e-0824
chordate pharynx2.59e-0824
pharyngeal arch system2.59e-0824
pharyngeal region of foregut2.59e-0824
neurectoderm4.47e-0864
neural plate4.47e-0864
presumptive neural plate4.47e-0864
thymus4.55e-0823
neck4.55e-0823
respiratory system epithelium4.55e-0823
hemolymphoid system gland4.55e-0823
pharyngeal epithelium4.55e-0823
thymic region4.55e-0823
pharyngeal gland4.55e-0823
entire pharyngeal arch endoderm4.55e-0823
thymus primordium4.55e-0823
early pharyngeal endoderm4.55e-0823
central nervous system1.16e-0773
craniocervical region1.55e-0736
gland of gut1.72e-0724
regional part of brain1.79e-0746
ectoderm-derived structure3.51e-0795
ectoderm3.51e-0795
presumptive ectoderm3.51e-0795
anterior neural tube3.63e-0740
nervous system3.75e-0775
brain3.91e-0747
future brain3.91e-0747
regional part of cerebral cortex4.27e-0717
cerebral cortex6.60e-0721
cerebral hemisphere6.60e-0721
pallium6.60e-0721
anterior region of body9.49e-0743
segment of respiratory tract9.89e-0727
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