FFCP PHASE1:Mm9::chr11:94871212..94871233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217125 | |EntrezGene=217125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=883 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENSMUST00000128512_5end | |association_with_transcript=16bp_to_ENSMUST00000128512_5end | ||
|cluster_id=chr11:94871212..94871233,+ | |||
|description=CAGE_peak_4_at_Samd14_5end | |description=CAGE_peak_4_at_Samd14_5end | ||
|id=chr11:94871212..94871233,+ | |id=chr11:94871212..94871233,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0002319!1.20e-09!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!4.25e-08!39;CL:0000211!4.25e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0002319!1.20e-09!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!4.25e-08!39;CL:0000211!4.25e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.55e-13,23;CL:0000337,6.55e-13,23;CL:0000540,5.47e-12,33;CL:0000047,5.47e-12,33;CL:0000031,5.47e-12,33;CL:0000404,5.47e-12,33;CL:0002319,1.79e-09,43;CL:0000221,1.96e-09,44;CL:0000133,1.96e-09,44;CL:0000393,3.58e-08,39;CL:0000211,3.58e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.25e-15!73;UBERON:0005743!5.25e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002346!2.82e-13!71;UBERON:0003075!2.82e-13!71;UBERON:0007284!2.82e-13!71;UBERON:0004121!4.61e-12!102;UBERON:0000924!4.61e-12!102;UBERON:0006601!4.61e-12!102;UBERON:0001049!5.10e-12!52;UBERON:0005068!5.10e-12!52;UBERON:0006241!5.10e-12!52;UBERON:0007135!5.10e-12!52;UBERON:0000033!1.54e-11!63;UBERON:0003056!1.15e-10!49;UBERON:0000955!9.03e-10!50;UBERON:0006238!9.03e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0000468!3.46e-08!333;UBERON:0003080!5.57e-08!40;UBERON:0002020!7.62e-08!34;UBERON:0000153!1.30e-07!94;UBERON:0002780!1.49e-07!39;UBERON:0001890!1.49e-07!39;UBERON:0006240!1.49e-07!39;UBERON:0000922!7.04e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!5.25e-15!73;UBERON:0005743!5.25e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002346!2.82e-13!71;UBERON:0003075!2.82e-13!71;UBERON:0007284!2.82e-13!71;UBERON:0004121!4.61e-12!102;UBERON:0000924!4.61e-12!102;UBERON:0006601!4.61e-12!102;UBERON:0001049!5.10e-12!52;UBERON:0005068!5.10e-12!52;UBERON:0006241!5.10e-12!52;UBERON:0007135!5.10e-12!52;UBERON:0000033!1.54e-11!63;UBERON:0003056!1.15e-10!49;UBERON:0000955!9.03e-10!50;UBERON:0006238!9.03e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0000468!3.46e-08!333;UBERON:0003080!5.57e-08!40;UBERON:0002020!7.62e-08!34;UBERON:0000153!1.30e-07!94;UBERON:0002780!1.49e-07!39;UBERON:0001890!1.49e-07!39;UBERON:0006240!1.49e-07!39;UBERON:0000922!7.04e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-15,64;UBERON:0003075,4.38e-15,64;UBERON:0007284,4.38e-15,64;UBERON:0001017,5.64e-15,73;UBERON:0001016,9.13e-14,75;UBERON:0004121,3.61e-12,95;UBERON:0000924,3.61e-12,95;UBERON:0006601,3.61e-12,95;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,8.34e-12,54;UBERON:0010371,1.22e-11,73;UBERON:0003056,1.95e-10,49;UBERON:0000955,4.38e-09,47;UBERON:0006238,4.38e-09,47;UBERON:0002616,9.47e-09,46;UBERON:0010314,4.06e-08,92;UBERON:0003080,1.14e-07,40;UBERON:0000922,1.71e-07,320;UBERON:0002020,1.74e-07,34;UBERON:0002780,3.11e-07,39;UBERON:0001890,3.11e-07,39;UBERON:0006240,3.11e-07,39 | |||
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| ||
|short_description=p4@Samd14 | |short_description=p4@Samd14 | ||
}} | }} |
Latest revision as of 00:31, 26 September 2015
Short description: | p4@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | 16bp_to_ENSMUST00000128512_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.55e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.55e-13 | 23 |
neuron | 5.47e-12 | 33 |
neuronal stem cell | 5.47e-12 | 33 |
neuroblast | 5.47e-12 | 33 |
electrically signaling cell | 5.47e-12 | 33 |
neural cell | 1.79e-09 | 43 |
ectodermal cell | 1.96e-09 | 44 |
neurectodermal cell | 1.96e-09 | 44 |
electrically responsive cell | 3.58e-08 | 39 |
electrically active cell | 3.58e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.38e-15 | 64 |
neural plate | 4.38e-15 | 64 |
presumptive neural plate | 4.38e-15 | 64 |
central nervous system | 5.64e-15 | 73 |
nervous system | 9.13e-14 | 75 |
ectoderm-derived structure | 3.61e-12 | 95 |
ectoderm | 3.61e-12 | 95 |
presumptive ectoderm | 3.61e-12 | 95 |
neural tube | 7.95e-12 | 52 |
neural rod | 7.95e-12 | 52 |
future spinal cord | 7.95e-12 | 52 |
neural keel | 7.95e-12 | 52 |
regional part of nervous system | 8.34e-12 | 54 |
ecto-epithelium | 1.22e-11 | 73 |
pre-chordal neural plate | 1.95e-10 | 49 |
brain | 4.38e-09 | 47 |
future brain | 4.38e-09 | 47 |
regional part of brain | 9.47e-09 | 46 |
structure with developmental contribution from neural crest | 4.06e-08 | 92 |
anterior neural tube | 1.14e-07 | 40 |
embryo | 1.71e-07 | 320 |
gray matter | 1.74e-07 | 34 |
regional part of forebrain | 3.11e-07 | 39 |
forebrain | 3.11e-07 | 39 |
future forebrain | 3.11e-07 | 39 |