FFCP PHASE1:Mm9::chr2:156817757..156817855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29812 | |EntrezGene=29812 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCV2,Q9QYF9,Q8CBD0,Q544I1 | |UniProt=Q8VCV2,Q9QYF9,Q8CBD0,Q544I1 | ||
|association_with_transcript=0bp_to_ENSMUST00000069600,ENSMUST00000072298,ENSMUST00000109558,ENSMUST00000126627,NM_013865,NM_180956,uc008nof.2,uc008nog.2,uc008noh.2,uc008noi.2_5end | |association_with_transcript=0bp_to_ENSMUST00000069600,ENSMUST00000072298,ENSMUST00000109558,ENSMUST00000126627,NM_013865,NM_180956,uc008nof.2,uc008nog.2,uc008noh.2,uc008noi.2_5end | ||
|cluster_id=chr2:156817757..156817855,- | |||
|description=CAGE_peak_1_at_Ndrg3_5end | |description=CAGE_peak_1_at_Ndrg3_5end | ||
|id=chr2:156817757..156817855,- | |id=chr2:156817757..156817855,- | ||
|ontology_enrichment_celltype=CL:0000117!5.11e-09!23;CL:0000337!5.11e-09!23;CL:0000540!1.92e-08!33;CL:0000047!1.92e-08!33;CL:0000031!1.92e-08!33;CL:0000404!1.92e-08!33 | |ontology_enrichment_celltype=CL:0000117!5.11e-09!23;CL:0000337!5.11e-09!23;CL:0000540!1.92e-08!33;CL:0000047!1.92e-08!33;CL:0000031!1.92e-08!33;CL:0000404!1.92e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.11e-09,23;CL:0000337,5.11e-09,23;CL:0000540,1.92e-08,33;CL:0000047,1.92e-08,33;CL:0000031,1.92e-08,33;CL:0000404,1.92e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.01e-18!73;UBERON:0005743!6.01e-18!73;UBERON:0000033!1.31e-17!63;UBERON:0001049!3.02e-17!52;UBERON:0005068!3.02e-17!52;UBERON:0006241!3.02e-17!52;UBERON:0007135!3.02e-17!52;UBERON:0000073!1.65e-16!75;UBERON:0001016!1.65e-16!75;UBERON:0000955!2.16e-16!50;UBERON:0006238!2.16e-16!50;UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0007811!4.59e-16!86;UBERON:0002616!7.85e-16!49;UBERON:0000153!2.39e-15!94;UBERON:0002020!2.59e-15!34;UBERON:0004121!7.68e-15!102;UBERON:0000924!7.68e-15!102;UBERON:0006601!7.68e-15!102;UBERON:0003056!1.21e-13!49;UBERON:0003080!1.99e-13!40;UBERON:0002791!7.26e-13!29;UBERON:0003528!7.26e-13!29;UBERON:0001893!7.26e-13!29;UBERON:0002780!7.79e-13!39;UBERON:0001890!7.79e-13!39;UBERON:0006240!7.79e-13!39;UBERON:0000956!1.87e-09!21;UBERON:0001869!1.87e-09!21;UBERON:0000203!1.87e-09!21;UBERON:0002619!6.96e-08!17;UBERON:0002021!7.27e-08!10;UBERON:0000411!7.27e-08!10;UBERON:0001950!7.27e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-18,54;UBERON:0001017,6.01e-18,73;UBERON:0002346,2.80e-17,64;UBERON:0003075,2.80e-17,64;UBERON:0007284,2.80e-17,64;UBERON:0001049,3.02e-17,52;UBERON:0005068,3.02e-17,52;UBERON:0006241,3.02e-17,52;UBERON:0007135,3.02e-17,52;UBERON:0001016,1.65e-16,75;UBERON:0002020,2.59e-15,34;UBERON:0004121,3.12e-15,95;UBERON:0000924,3.12e-15,95;UBERON:0006601,3.12e-15,95;UBERON:0010371,5.07e-15,73;UBERON:0000955,1.12e-14,47;UBERON:0006238,1.12e-14,47;UBERON:0002616,3.91e-14,46;UBERON:0003056,1.21e-13,49;UBERON:0003080,1.99e-13,40;UBERON:0003528,7.26e-13,29;UBERON:0002791,7.26e-13,29;UBERON:0001893,7.26e-13,29;UBERON:0002780,7.79e-13,39;UBERON:0001890,7.79e-13,39;UBERON:0006240,7.79e-13,39;UBERON:0000956,1.87e-09,21;UBERON:0001869,1.87e-09,21;UBERON:0000203,1.87e-09,21;UBERON:0011216,1.47e-08,194;UBERON:0010314,2.17e-08,92;UBERON:0002619,6.96e-08,17;UBERON:0002021,7.27e-08,10;UBERON:0000411,7.27e-08,10;UBERON:0001950,7.27e-08,10 | |||
|phase1_expression=63.4189434534984,44.3198767701989,39.1299345875001,52.0238443447748,57.1021132138836,31.8970616632591,30.1360306368228,77.2157474180626,17.73937899111,15.9163877898956,11.1291679346578,17.4701028199787,73.6163138704185,86.3713575899694,28.9805492779627,37.8628750018975,31.4802845157666,32.4926030318985,34.0043795342232,26.7365480632759,146.954805381049,48.6525660884338,36.306770690312,52.6375070990308,44.2759912459638,41.9189333803965,46.9530575813392,54.5142218695299,74.8692272658113,53.6824176388652,33.9247681302616,66.6782207132613,62.1215435460416,79.2408405077194,36.3953040886606,49.8703936075477,46.9589519403449,26.3674927364252,28.1280724028568,27.2232346866375,30.5880373776127,26.6387739133794,29.6161315349004,68.3619721607385,58.3931123824404,30.1016673545158,16.4302182313088,38.3724275229586,49.6490772979906,55.8013810343193,47.1754240877472,35.9381410912429,21.1406083632748,63.8318684969983,65.202197033638,31.9001700684574,38.6820143917322,21.1425557833751,72.2269765268764,95.2183762689659,60.213983333087,19.6529828600097,31.1253178638899,23.8473425079571,22.7439263390404,15.6305625288142,38.3488141463558,45.3377600279434,76.1081754344226,82.6236342589947,81.8164099656876,140.540284326671,152.620161797565,68.1048843635144,56.2612914877047,60.6684399162614,401.922965647769,358.801420019377,357.903222487047,74.1200937043689,80.9665645881325,75.5324387307302,353.72485973475,306.705622467266,298.262179660333,156.153150301044,180.95440629566,98.0461085041081,21.809143679957,39.0704965752081,36.5229255764114,31.8356834483113,4.75979933595425,35.6204106480959,39.6363614643078,43.9066349355389,81.5982080965478,106.17809096613,80.5336614268893,69.2545566040267,66.0555638752632,24.3820307087204,25.4805239706646,21.3320010945999,6.92771331235885,6.08063677140237,8.59391556525132,65.0848114398642,87.0031289054497,91.1434733858024,40.4220811365097,59.9796992274918,41.5107895060905,48.5326902579445,55.0315149395098,56.1729663243649,17.5508427091405,181.472192934489,20.3460426948471,37.6916760377463,35.9971675090441,46.0631490478461,35.4144346314432,751.27552513163,830.246745808536,106.525592021983,25.2809912707492,14.3976655438418,26.3035370041244,556.322434749512,380.640501545097,99.14128381705,756.831090117172,717.026142354247,424.718763079741,405.116433880191,41.85597854248,49.2651603615968,40.1829185909543,187.082809883075,47.2337207954614,42.0720851113255,47.8965265282229,50.787523610636,60.7565937421358,87.3735572342676,70.9322054917147,357.52805836132,39.8800786925758,45.9527774807801,46.2751456551185,43.839146485515,62.8386783249851,53.2825814778915,61.734640922383,35.8261680273288,18.2575428701441,11.8380037272769,21.0280989552739,35.8327586486418,44.3254253364272,36.012412292203,33.8544971886851,38.3690251907437,38.1039768831824,33.7174219888091,30.5831677595566,28.4907435375894,28.7979737348591,41.6985358760902,40.6154735824737,32.4563972084238,41.7145219052996,45.8985952160471,604.373312173302,170.924561161991,147.03635842779,110.540336865362,35.4058495888488,45.9828610283668,43.0417320815792,47.3956282864855,53.8154866104586,73.0466404272227,84.9407020164676,58.4681289270239,53.5343994744574,68.4410263821559,64.3381487493096,79.0961079615715,93.1554994959932,100.367201720201,42.6752777144434,48.7841148843542,43.9560169125014,49.4872726664114,52.5611240224266,52.6720007376292,72.9749638413929,112.036102316518,126.383975912307,122.780178102192,56.0295465194711,79.751960532293,84.5203678986773,76.90284243562,79.5211675842931,75.4884510025065,65.1842180560435,46.8944704044821,30.6435578604817,29.1035097979366,21.5652309791032,29.0269939181433,35.5722947350599,32.3300963772303,32.1121370204223,42.9374734013397,67.0654080304775,36.5718424717036,37.4819445816659,53.2999569334091,47.8768106508544,49.7493584602193,52.845688276695,33.1727201358258,61.7929764896269,55.5876371018425,53.0984379629432,68.3310022364628,57.6767839432091,59.8847102527458,25.6345182696763,37.529492183491,43.2752560256752,30.6289788398253,638.349145791461,514.793727512956,73.6067904741273,63.8751445827064,41.6470849629459,56.6136179230126,73.6748020246172,57.8304491045176,63.0520247653175,51.5199286035675,53.8398233227609,61.3737301613755,64.8271955832299,353.77476938041,71.1119826893426,58.7616492101942,38.2784354480904,46.521574678255,46.460798418987,43.7005145078967,43.8369157598889,43.1905632641007,50.4966236826121,31.6658202382245,33.3372498187005,35.989839218273,38.8582142439346,44.2451461110142,33.7339547439996,46.4109944616841,110.302432264227,38.5330741227004,50.061810623926,47.7971588120451,64.3745048121453,50.1216377461818,60.5540395815805,67.8956836525556,27.9259332595815,27.5381692122966,56.6757983001252,42.5406532589018,65.0701639584499,46.3806392697519,43.6902779051479,46.4518746278523,72.8702091574627,628.962624419649,52.9699730473343,39.8326655169019,64.8180845793991,56.5105371014073,52.9006661280367,43.2390747360328,35.0155565787342,40.0261153645662,35.9319931891502,63.0082607889975,35.7459672746683,44.323643833653,43.5261523511859,49.5539261554291,54.3722783727982,47.8768429666113,43.0624504329,51.8276765128379,76.2136042955742,168.382953846557,35.512655137104,45.4530299973696,47.1556697802728,47.8349923326357,49.2098927450156,64.2033276864957,57.2703324591279,53.5140021708635,79.6931017635402,55.8059319108074,37.1558708072646,103.019625324786,71.7647262127181,126.334477312738,86.3973472802337,73.9380253106698,66.9556165612863,64.1843700436634,72.8109368970666,60.882769318733,60.8130317106899,72.4940271133883,81.864619821392,70.7157036056421,85.0863847881822,63.0310466450288,25.5283846380174,32.8352715190681,24.0075001400632,44.4336066274038,41.8531920256136,33.3335956166422,40.7299920250225,32.1006146582633,714.975832753206,793.600707738373,783.721062385095,787.946841045808,578.894729206193,574.099362016172,550.143337688922,625.496151278442,617.179961036487,549.343690768681,44.0058353756909,49.4790843017279,53.439618601044,54.4559046232979,63.5127882762786,55.1530525350042,63.3403174234603,55.2173953400236,71.244064529383,64.9431834232959,65.1441800717916,62.4353189987912,54.5929988549414,59.6074168889333,51.8642284669188,50.0108375847227,44.0360438590451,48.6131235568537,44.9173631875604,39.3021116758841,55.2019496340519,53.4202176539606,46.9719294196222,51.8886707377413,50.4426279026172,57.8763917979067,56.3418156448139,46.3002692130603,55.4080784491116,40.4022435593572,41.2849863072126,47.6761694697727,32.3292524104055,49.1149786559512,57.8719832943424,100.673662908992,72.0509354011858,68.7587372954555,56.4300579603088,64.4126943828985,65.6185974805793 | |phase1_expression=63.4189434534984,44.3198767701989,39.1299345875001,52.0238443447748,57.1021132138836,31.8970616632591,30.1360306368228,77.2157474180626,17.73937899111,15.9163877898956,11.1291679346578,17.4701028199787,73.6163138704185,86.3713575899694,28.9805492779627,37.8628750018975,31.4802845157666,32.4926030318985,34.0043795342232,26.7365480632759,146.954805381049,48.6525660884338,36.306770690312,52.6375070990308,44.2759912459638,41.9189333803965,46.9530575813392,54.5142218695299,74.8692272658113,53.6824176388652,33.9247681302616,66.6782207132613,62.1215435460416,79.2408405077194,36.3953040886606,49.8703936075477,46.9589519403449,26.3674927364252,28.1280724028568,27.2232346866375,30.5880373776127,26.6387739133794,29.6161315349004,68.3619721607385,58.3931123824404,30.1016673545158,16.4302182313088,38.3724275229586,49.6490772979906,55.8013810343193,47.1754240877472,35.9381410912429,21.1406083632748,63.8318684969983,65.202197033638,31.9001700684574,38.6820143917322,21.1425557833751,72.2269765268764,95.2183762689659,60.213983333087,19.6529828600097,31.1253178638899,23.8473425079571,22.7439263390404,15.6305625288142,38.3488141463558,45.3377600279434,76.1081754344226,82.6236342589947,81.8164099656876,140.540284326671,152.620161797565,68.1048843635144,56.2612914877047,60.6684399162614,401.922965647769,358.801420019377,357.903222487047,74.1200937043689,80.9665645881325,75.5324387307302,353.72485973475,306.705622467266,298.262179660333,156.153150301044,180.95440629566,98.0461085041081,21.809143679957,39.0704965752081,36.5229255764114,31.8356834483113,4.75979933595425,35.6204106480959,39.6363614643078,43.9066349355389,81.5982080965478,106.17809096613,80.5336614268893,69.2545566040267,66.0555638752632,24.3820307087204,25.4805239706646,21.3320010945999,6.92771331235885,6.08063677140237,8.59391556525132,65.0848114398642,87.0031289054497,91.1434733858024,40.4220811365097,59.9796992274918,41.5107895060905,48.5326902579445,55.0315149395098,56.1729663243649,17.5508427091405,181.472192934489,20.3460426948471,37.6916760377463,35.9971675090441,46.0631490478461,35.4144346314432,751.27552513163,830.246745808536,106.525592021983,25.2809912707492,14.3976655438418,26.3035370041244,556.322434749512,380.640501545097,99.14128381705,756.831090117172,717.026142354247,424.718763079741,405.116433880191,41.85597854248,49.2651603615968,40.1829185909543,187.082809883075,47.2337207954614,42.0720851113255,47.8965265282229,50.787523610636,60.7565937421358,87.3735572342676,70.9322054917147,357.52805836132,39.8800786925758,45.9527774807801,46.2751456551185,43.839146485515,62.8386783249851,53.2825814778915,61.734640922383,35.8261680273288,18.2575428701441,11.8380037272769,21.0280989552739,35.8327586486418,44.3254253364272,36.012412292203,33.8544971886851,38.3690251907437,38.1039768831824,33.7174219888091,30.5831677595566,28.4907435375894,28.7979737348591,41.6985358760902,40.6154735824737,32.4563972084238,41.7145219052996,45.8985952160471,604.373312173302,170.924561161991,147.03635842779,110.540336865362,35.4058495888488,45.9828610283668,43.0417320815792,47.3956282864855,53.8154866104586,73.0466404272227,84.9407020164676,58.4681289270239,53.5343994744574,68.4410263821559,64.3381487493096,79.0961079615715,93.1554994959932,100.367201720201,42.6752777144434,48.7841148843542,43.9560169125014,49.4872726664114,52.5611240224266,52.6720007376292,72.9749638413929,112.036102316518,126.383975912307,122.780178102192,56.0295465194711,79.751960532293,84.5203678986773,76.90284243562,79.5211675842931,75.4884510025065,65.1842180560435,46.8944704044821,30.6435578604817,29.1035097979366,21.5652309791032,29.0269939181433,35.5722947350599,32.3300963772303,32.1121370204223,42.9374734013397,67.0654080304775,36.5718424717036,37.4819445816659,53.2999569334091,47.8768106508544,49.7493584602193,52.845688276695,33.1727201358258,61.7929764896269,55.5876371018425,53.0984379629432,68.3310022364628,57.6767839432091,59.8847102527458,25.6345182696763,37.529492183491,43.2752560256752,30.6289788398253,638.349145791461,514.793727512956,73.6067904741273,63.8751445827064,41.6470849629459,56.6136179230126,73.6748020246172,57.8304491045176,63.0520247653175,51.5199286035675,53.8398233227609,61.3737301613755,64.8271955832299,353.77476938041,71.1119826893426,58.7616492101942,38.2784354480904,46.521574678255,46.460798418987,43.7005145078967,43.8369157598889,43.1905632641007,50.4966236826121,31.6658202382245,33.3372498187005,35.989839218273,38.8582142439346,44.2451461110142,33.7339547439996,46.4109944616841,110.302432264227,38.5330741227004,50.061810623926,47.7971588120451,64.3745048121453,50.1216377461818,60.5540395815805,67.8956836525556,27.9259332595815,27.5381692122966,56.6757983001252,42.5406532589018,65.0701639584499,46.3806392697519,43.6902779051479,46.4518746278523,72.8702091574627,628.962624419649,52.9699730473343,39.8326655169019,64.8180845793991,56.5105371014073,52.9006661280367,43.2390747360328,35.0155565787342,40.0261153645662,35.9319931891502,63.0082607889975,35.7459672746683,44.323643833653,43.5261523511859,49.5539261554291,54.3722783727982,47.8768429666113,43.0624504329,51.8276765128379,76.2136042955742,168.382953846557,35.512655137104,45.4530299973696,47.1556697802728,47.8349923326357,49.2098927450156,64.2033276864957,57.2703324591279,53.5140021708635,79.6931017635402,55.8059319108074,37.1558708072646,103.019625324786,71.7647262127181,126.334477312738,86.3973472802337,73.9380253106698,66.9556165612863,64.1843700436634,72.8109368970666,60.882769318733,60.8130317106899,72.4940271133883,81.864619821392,70.7157036056421,85.0863847881822,63.0310466450288,25.5283846380174,32.8352715190681,24.0075001400632,44.4336066274038,41.8531920256136,33.3335956166422,40.7299920250225,32.1006146582633,714.975832753206,793.600707738373,783.721062385095,787.946841045808,578.894729206193,574.099362016172,550.143337688922,625.496151278442,617.179961036487,549.343690768681,44.0058353756909,49.4790843017279,53.439618601044,54.4559046232979,63.5127882762786,55.1530525350042,63.3403174234603,55.2173953400236,71.244064529383,64.9431834232959,65.1441800717916,62.4353189987912,54.5929988549414,59.6074168889333,51.8642284669188,50.0108375847227,44.0360438590451,48.6131235568537,44.9173631875604,39.3021116758841,55.2019496340519,53.4202176539606,46.9719294196222,51.8886707377413,50.4426279026172,57.8763917979067,56.3418156448139,46.3002692130603,55.4080784491116,40.4022435593572,41.2849863072126,47.6761694697727,32.3292524104055,49.1149786559512,57.8719832943424,100.673662908992,72.0509354011858,68.7587372954555,56.4300579603088,64.4126943828985,65.6185974805793 | ||
|short_description=p1@Ndrg3 | |short_description=p1@Ndrg3 | ||
}} | }} |
Latest revision as of 00:18, 26 September 2015
Short description: | p1@Ndrg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndrg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000069600, ENSMUST00000072298, ENSMUST00000109558, ENSMUST00000126627, NM_013865, NM_180956, uc008nof.2, uc008nog.2, uc008noh.2, uc008noi.2_5end |
EntrezGene: | Ndrg3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.11e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-09 | 23 |
neuron | 1.92e-08 | 33 |
neuronal stem cell | 1.92e-08 | 33 |
neuroblast | 1.92e-08 | 33 |
electrically signaling cell | 1.92e-08 | 33 |