Personal tools

FFCP PHASE1:Mm9::chr4:48598148..48598200,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230157
|EntrezGene=230157
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q6PFE7
|UniProt=Q6PFE7
|association_with_transcript=-36bp_to_ENSMUST00000123476_5end
|association_with_transcript=-36bp_to_ENSMUST00000123476_5end
|cluster_id=chr4:48598148..48598200,+
|description=CAGE_peak_3_at_Tmeff1_5end
|description=CAGE_peak_3_at_Tmeff1_5end
|id=chr4:48598148..48598200,+
|id=chr4:48598148..48598200,+
|ontology_enrichment_celltype=CL:0000540!2.89e-15!33;CL:0000047!2.89e-15!33;CL:0000031!2.89e-15!33;CL:0000404!2.89e-15!33;CL:0000117!1.06e-14!23;CL:0000337!1.06e-14!23;CL:0000393!8.04e-13!39;CL:0000211!8.04e-13!39;CL:0000221!2.23e-09!44;CL:0000133!2.23e-09!44;CL:0002319!4.04e-09!43;CL:0000055!2.17e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-16,33;CL:0000047,2.05e-16,33;CL:0000031,2.05e-16,33;CL:0000404,2.05e-16,33;CL:0000117,2.31e-16,23;CL:0000337,2.31e-16,23;CL:0000393,5.21e-12,39;CL:0000211,5.21e-12,39;CL:0000221,2.09e-09,44;CL:0000133,2.09e-09,44;CL:0002319,4.02e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.28e-19!73;UBERON:0005743!2.28e-19!73;UBERON:0002346!2.44e-19!71;UBERON:0003075!2.44e-19!71;UBERON:0007284!2.44e-19!71;UBERON:0000073!1.47e-18!75;UBERON:0001016!1.47e-18!75;UBERON:0003056!4.11e-18!49;UBERON:0002020!6.82e-17!34;UBERON:0001049!8.94e-17!52;UBERON:0005068!8.94e-17!52;UBERON:0006241!8.94e-17!52;UBERON:0007135!8.94e-17!52;UBERON:0000033!9.60e-17!63;UBERON:0004121!1.53e-16!102;UBERON:0000924!1.53e-16!102;UBERON:0006601!1.53e-16!102;UBERON:0003080!7.93e-15!40;UBERON:0000955!1.51e-14!50;UBERON:0006238!1.51e-14!50;UBERON:0002780!2.01e-14!39;UBERON:0001890!2.01e-14!39;UBERON:0006240!2.01e-14!39;UBERON:0002616!2.28e-14!49;UBERON:0002791!1.66e-13!29;UBERON:0003528!1.66e-13!29;UBERON:0001893!1.66e-13!29;UBERON:0000956!5.84e-09!21;UBERON:0001869!5.84e-09!21;UBERON:0000203!5.84e-09!21;UBERON:0000153!2.29e-07!94;UBERON:0007811!6.85e-07!86;UBERON:0002619!7.82e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.75e-23,64;UBERON:0003075,4.75e-23,64;UBERON:0007284,4.75e-23,64;UBERON:0001017,2.51e-21,73;UBERON:0003056,2.53e-20,49;UBERON:0001016,5.44e-20,75;UBERON:0000073,5.82e-20,54;UBERON:0001049,5.10e-19,52;UBERON:0005068,5.10e-19,52;UBERON:0006241,5.10e-19,52;UBERON:0007135,5.10e-19,52;UBERON:0002020,6.63e-19,34;UBERON:0010371,1.00e-18,73;UBERON:0004121,2.82e-18,95;UBERON:0000924,2.82e-18,95;UBERON:0006601,2.82e-18,95;UBERON:0003080,8.09e-17,40;UBERON:0002780,2.31e-16,39;UBERON:0001890,2.31e-16,39;UBERON:0006240,2.31e-16,39;UBERON:0010314,5.77e-16,92;UBERON:0000955,2.72e-15,47;UBERON:0006238,2.72e-15,47;UBERON:0002616,4.30e-15,46;UBERON:0003528,4.39e-15,29;UBERON:0002791,4.39e-15,29;UBERON:0001893,4.39e-15,29;UBERON:0000956,5.85e-10,21;UBERON:0001869,5.85e-10,21;UBERON:0000203,5.85e-10,21;UBERON:0002619,1.46e-07,17
|phase1_expression=3.84357233051505,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.12608225377674,0,0,0,0,0,0,0.646413698057667,0.190023419456374,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,1.10128051297009,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,49.5675329106015,44.4352422588508,45.0020296489387,1.35537812827653,1.77858959222228,0,0,0,0,0.768436610643109,14.101787273953,13.3655878948374,16.8259969081106,23.9946826899195,17.0068776532742,20.7009450673272,19.9358579717932,14.7075005857603,3.30347642998166,6.2566795661742,6.91229399653096,50.380561912934,58.1861413311325,61.9886910962544,6.70039197603314,6.19038871034848,6.72312290217964,30.9360014747351,28.4743361598206,62.4438143514757,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.29893002301434,0.35333957451034,4.22530259330042,2.56652954828636,0,0,1.73192832808971,1.26679932737549,0.505524445014783,0.34255163915718,0,0,2.94925055502431,2.43572382649713,2.53677046981664,3.16517545160507,3.29248379979973,0,0,0,0,0.647067399789637,0,0,1.86391761218122,0,1.46612694769419,0,0,0,0,5.84183493678809,11.4375150704657,34.303638126812,6.43149984711423,9.2057564638919,6.85700547046548,7.46309810111685,2.95334155165917,0.373220911830279,0,0.210441855886474,6.8963834770233,13.104419952708,16.3856538122868,12.3577950625286,12.5867523429957,7.68682321709099,9.65127762965207,1.55222022443409,3.66465587985832,6.24050064553804,5.27853372491847,3.06874025398605,3.05851974148158,0.696504333044333,0.61734640922383,5.37392520409932,0,0,0.284163499395593,2.27838349789052,3.51789089971644,1.80062061461015,2.60419209143731,1.18058539048442,1.3884040159864,0.697601834251224,1.3413670069981,0.700592054203017,0.329119699826961,0.32833492815819,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,5.46753866266731,31.6946206128196,0.330418782983798,0,5.11891801284562,4.41249676534833,2.44848176511977,1.00841762311671,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,3.22435431620239,2.17072173958485,1.1270773567308,1.83286195060783,1.16371492300575,2.38461787627083,0.316182685621286,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,7.20067364727842,2.60743962307241,2.20668611507745,1.64283173801951,2.01007508930179,1.42826184531608,2.34160377429359,1.26108115284953,2.6575762757853,2.39182152986231,1.47476983244164,0.518054945597687,0.867894351489069,0,0,0,0,4.0137647496948,7.14991288212439,1.96721934452011,0.252470927204373,3.78609863299508,1.56175497718655,3.23135096599198,4.06246956519338,3.7875774594007,2.54768877709949,0.809621403349789,6.72188473196017,4.34816555741176,3.53453448063988,0.141940085208269,3.73937767701236,1.95464351224291,0.164970122972535,0,4.61283208694465,0.906970670894253,0.943025398779491,0.590603785761546,1.22974059177571,0,0,0,0,0,0,0,8.8229936075342,4.91562998374467,4.50107773566344,3.90148514013002,1.96205699362278,2.79733335023606,1.2178597964584,0.469343416127421,1.0591603543191,0.220528398054962,0.16488625294148,0,0.422190474497091,0.716234064018819,0.492422699235184,0.291480836629851,4.07935664423121,0,1.44470807574256,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,5.69404788446044,4.87966721104437,2.37611749807963,1.46361807210128,1.09181281873089,0.269728692769641,0.826534557253359,0.523511883968059,0.259229946583586,0,2.81846469342095,4.18646328923141,2.64733584731356,2.52786544847262,1.16243841129958,3.71703476079712,2.8165737274981,2.21347454234715,3.25063967719704,3.14059357073808,2.88030006257865,0,2.43270258348197,1.1298205288131,0.129920822977795,1.07416017400489,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,3.99574716073316,1.97370484540847,1.67884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0,12.9892923801925,9.66682996665071,8.02053718815155,13.0608418581203,7.53590771747707,6.7985450765073,10.8003600037089,5.40385443869065,3.62513927187364,5.69536342927002,6.64239024538731,11.9707462020309,9.21961471072325,4.86213434136588,6.70762120409543,5.69914876195044,6.44515510624684,3.7086310303001,7.38114182061175,6.31743029409494,5.83002389747551,5.09291121742406,4.775716880964,5.37811280200902,4.307660171671,3.81034953026459,6.02598494913249,6.17309505483856,3.70877310722976,3.23837624295674,3.42869252385415,3.54951612318675,4.5302876089991,4.94177816549917,3.85848459702856,5.33072029717562,4.024415403201,4.20911538300549,5.29636043998861,3.36685362994643,5.45721083371201,5.71325997778268,2.86461730218783,3.40861050609125,2.89359916471712,8.24374907195222,3.97683734357194,2.57845264857958,1.72159498861959,0.661774257358546,0.927471342481686
|phase1_expression=3.84357233051505,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.12608225377674,0,0,0,0,0,0,0.646413698057667,0.190023419456374,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,1.10128051297009,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,49.5675329106015,44.4352422588508,45.0020296489387,1.35537812827653,1.77858959222228,0,0,0,0,0.768436610643109,14.101787273953,13.3655878948374,16.8259969081106,23.9946826899195,17.0068776532742,20.7009450673272,19.9358579717932,14.7075005857603,3.30347642998166,6.2566795661742,6.91229399653096,50.380561912934,58.1861413311325,61.9886910962544,6.70039197603314,6.19038871034848,6.72312290217964,30.9360014747351,28.4743361598206,62.4438143514757,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.29893002301434,0.35333957451034,4.22530259330042,2.56652954828636,0,0,1.73192832808971,1.26679932737549,0.505524445014783,0.34255163915718,0,0,2.94925055502431,2.43572382649713,2.53677046981664,3.16517545160507,3.29248379979973,0,0,0,0,0.647067399789637,0,0,1.86391761218122,0,1.46612694769419,0,0,0,0,5.84183493678809,11.4375150704657,34.303638126812,6.43149984711423,9.2057564638919,6.85700547046548,7.46309810111685,2.95334155165917,0.373220911830279,0,0.210441855886474,6.8963834770233,13.104419952708,16.3856538122868,12.3577950625286,12.5867523429957,7.68682321709099,9.65127762965207,1.55222022443409,3.66465587985832,6.24050064553804,5.27853372491847,3.06874025398605,3.05851974148158,0.696504333044333,0.61734640922383,5.37392520409932,0,0,0.284163499395593,2.27838349789052,3.51789089971644,1.80062061461015,2.60419209143731,1.18058539048442,1.3884040159864,0.697601834251224,1.3413670069981,0.700592054203017,0.329119699826961,0.32833492815819,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,5.46753866266731,31.6946206128196,0.330418782983798,0,5.11891801284562,4.41249676534833,2.44848176511977,1.00841762311671,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,3.22435431620239,2.17072173958485,1.1270773567308,1.83286195060783,1.16371492300575,2.38461787627083,0.316182685621286,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,7.20067364727842,2.60743962307241,2.20668611507745,1.64283173801951,2.01007508930179,1.42826184531608,2.34160377429359,1.26108115284953,2.6575762757853,2.39182152986231,1.47476983244164,0.518054945597687,0.867894351489069,0,0,0,0,4.0137647496948,7.14991288212439,1.96721934452011,0.252470927204373,3.78609863299508,1.56175497718655,3.23135096599198,4.06246956519338,3.7875774594007,2.54768877709949,0.809621403349789,6.72188473196017,4.34816555741176,3.53453448063988,0.141940085208269,3.73937767701236,1.95464351224291,0.164970122972535,0,4.61283208694465,0.906970670894253,0.943025398779491,0.590603785761546,1.22974059177571,0,0,0,0,0,0,0,8.8229936075342,4.91562998374467,4.50107773566344,3.90148514013002,1.96205699362278,2.79733335023606,1.2178597964584,0.469343416127421,1.0591603543191,0.220528398054962,0.16488625294148,0,0.422190474497091,0.716234064018819,0.492422699235184,0.291480836629851,4.07935664423121,0,1.44470807574256,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,5.69404788446044,4.87966721104437,2.37611749807963,1.46361807210128,1.09181281873089,0.269728692769641,0.826534557253359,0.523511883968059,0.259229946583586,0,2.81846469342095,4.18646328923141,2.64733584731356,2.52786544847262,1.16243841129958,3.71703476079712,2.8165737274981,2.21347454234715,3.25063967719704,3.14059357073808,2.88030006257865,0,2.43270258348197,1.1298205288131,0.129920822977795,1.07416017400489,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,3.99574716073316,1.97370484540847,1.67884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0,12.9892923801925,9.66682996665071,8.02053718815155,13.0608418581203,7.53590771747707,6.7985450765073,10.8003600037089,5.40385443869065,3.62513927187364,5.69536342927002,6.64239024538731,11.9707462020309,9.21961471072325,4.86213434136588,6.70762120409543,5.69914876195044,6.44515510624684,3.7086310303001,7.38114182061175,6.31743029409494,5.83002389747551,5.09291121742406,4.775716880964,5.37811280200902,4.307660171671,3.81034953026459,6.02598494913249,6.17309505483856,3.70877310722976,3.23837624295674,3.42869252385415,3.54951612318675,4.5302876089991,4.94177816549917,3.85848459702856,5.33072029717562,4.024415403201,4.20911538300549,5.29636043998861,3.36685362994643,5.45721083371201,5.71325997778268,2.86461730218783,3.40861050609125,2.89359916471712,8.24374907195222,3.97683734357194,2.57845264857958,1.72159498861959,0.661774257358546,0.927471342481686
|short_description=p3@Tmeff1
|short_description=p3@Tmeff1
}}
}}

Latest revision as of 01:54, 27 September 2015

Short description:p3@Tmeff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmeff1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -36bp_to_ENSMUST00000123476_5end
EntrezGene:Tmeff1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmeff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C349.57
Mouse Granule cells, donor2.CNhs12357.11731-123E344.44
Mouse Granule cells, donor3.CNhs12108.11636-122C745.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D450.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F458.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D861.99
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E162.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F134.30
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C916.39
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C612.59
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G89.65
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H26.24
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G131.69
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C74.92
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.69
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I86.64
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.05e-1633
neuronal stem cell2.05e-1633
neuroblast2.05e-1633
electrically signaling cell2.05e-1633
CNS neuron (sensu Vertebrata)2.31e-1623
neuroblast (sensu Vertebrata)2.31e-1623
electrically responsive cell5.21e-1239
electrically active cell5.21e-1239
ectodermal cell2.09e-0944
neurectodermal cell2.09e-0944
neural cell4.02e-0943

Uber anatomy
Ontology termp-valuen
neurectoderm4.75e-2364
neural plate4.75e-2364
presumptive neural plate4.75e-2364
central nervous system2.51e-2173
pre-chordal neural plate2.53e-2049
nervous system5.44e-2075
regional part of nervous system5.82e-2054
neural tube5.10e-1952
neural rod5.10e-1952
future spinal cord5.10e-1952
neural keel5.10e-1952
gray matter6.63e-1934
ecto-epithelium1.00e-1873
ectoderm-derived structure2.82e-1895
ectoderm2.82e-1895
presumptive ectoderm2.82e-1895
anterior neural tube8.09e-1740
regional part of forebrain2.31e-1639
forebrain2.31e-1639
future forebrain2.31e-1639
structure with developmental contribution from neural crest5.77e-1692
brain2.72e-1547
future brain2.72e-1547
regional part of brain4.30e-1546
brain grey matter4.39e-1529
regional part of telencephalon4.39e-1529
telencephalon4.39e-1529
cerebral cortex5.85e-1021
cerebral hemisphere5.85e-1021
pallium5.85e-1021
regional part of cerebral cortex1.46e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:48598148..48598200,%2B&oldid=4286232"