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FFCP PHASE1:Mm9::chr2:132607341..132607365,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12653
|EntrezGene=12653
|HGNC=
|HGNC=
|MCL_coexpression_id=278
|TSSclassifier=NA
|UniProt=P16014,E9Q957,Q3TY66
|UniProt=P16014,E9Q957,Q3TY66
|association_with_transcript=327bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end
|association_with_transcript=327bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end
|cluster_id=chr2:132607341..132607365,+
|description=CAGE_peak_3_at_Chgb_5end
|description=CAGE_peak_3_at_Chgb_5end
|id=chr2:132607341..132607365,+
|id=chr2:132607341..132607365,+
|ontology_enrichment_celltype=CL:0000540!3.11e-14!33;CL:0000047!3.11e-14!33;CL:0000031!3.11e-14!33;CL:0000404!3.11e-14!33;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000393!8.39e-10!39;CL:0000211!8.39e-10!39;CL:0000221!3.51e-09!44;CL:0000133!3.51e-09!44;CL:0002319!5.00e-09!43
|ontology_enrichment_celltype=CL:0000540!3.11e-14!33;CL:0000047!3.11e-14!33;CL:0000031!3.11e-14!33;CL:0000404!3.11e-14!33;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000393!8.39e-10!39;CL:0000211!8.39e-10!39;CL:0000221!3.51e-09!44;CL:0000133!3.51e-09!44;CL:0002319!5.00e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,5.90e-16,23;CL:0000337,5.90e-16,23;CL:0000540,3.92e-14,33;CL:0000047,3.92e-14,33;CL:0000031,3.92e-14,33;CL:0000404,3.92e-14,33;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002319,1.92e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.94e-32!71;UBERON:0003075!1.94e-32!71;UBERON:0007284!1.94e-32!71;UBERON:0001017!2.40e-29!73;UBERON:0005743!2.40e-29!73;UBERON:0000073!3.95e-29!75;UBERON:0001016!3.95e-29!75;UBERON:0004121!9.01e-29!102;UBERON:0000924!9.01e-29!102;UBERON:0006601!9.01e-29!102;UBERON:0000033!1.92e-27!63;UBERON:0001049!1.29e-26!52;UBERON:0005068!1.29e-26!52;UBERON:0006241!1.29e-26!52;UBERON:0007135!1.29e-26!52;UBERON:0000955!5.63e-26!50;UBERON:0006238!5.63e-26!50;UBERON:0002616!3.64e-25!49;UBERON:0003056!5.10e-23!49;UBERON:0003080!4.15e-21!40;UBERON:0002780!2.25e-20!39;UBERON:0001890!2.25e-20!39;UBERON:0006240!2.25e-20!39;UBERON:0002020!5.07e-18!34;UBERON:0002791!3.80e-15!29;UBERON:0003528!3.80e-15!29;UBERON:0001893!3.80e-15!29;UBERON:0007811!9.09e-14!86;UBERON:0000956!1.76e-10!21;UBERON:0001869!1.76e-10!21;UBERON:0000203!1.76e-10!21;UBERON:0000153!1.90e-10!94;UBERON:0002619!1.52e-08!17;UBERON:0002021!1.69e-08!10;UBERON:0000411!1.69e-08!10;UBERON:0001950!1.69e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.57e-34,54;UBERON:0001017,4.51e-33,73;UBERON:0002346,1.55e-32,64;UBERON:0003075,1.55e-32,64;UBERON:0007284,1.55e-32,64;UBERON:0001049,6.75e-32,52;UBERON:0005068,6.75e-32,52;UBERON:0006241,6.75e-32,52;UBERON:0007135,6.75e-32,52;UBERON:0001016,1.66e-31,75;UBERON:0000955,2.96e-28,47;UBERON:0006238,2.96e-28,47;UBERON:0010371,9.82e-28,73;UBERON:0002616,2.70e-27,46;UBERON:0004121,3.62e-27,95;UBERON:0000924,3.62e-27,95;UBERON:0006601,3.62e-27,95;UBERON:0003056,2.33e-26,49;UBERON:0003080,1.24e-25,40;UBERON:0002780,9.67e-25,39;UBERON:0001890,9.67e-25,39;UBERON:0006240,9.67e-25,39;UBERON:0010314,3.08e-24,92;UBERON:0002020,6.79e-22,34;UBERON:0003528,2.07e-18,29;UBERON:0002791,2.07e-18,29;UBERON:0001893,2.07e-18,29;UBERON:0000956,9.39e-13,21;UBERON:0001869,9.39e-13,21;UBERON:0000203,9.39e-13,21;UBERON:0002619,2.07e-10,17;UBERON:0002021,6.16e-10,10;UBERON:0000411,6.16e-10,10;UBERON:0001950,6.16e-10,10;UBERON:0001894,3.48e-07,10;UBERON:0006222,3.48e-07,10;UBERON:0002420,6.56e-07,8;UBERON:0007245,6.56e-07,8;UBERON:0010009,6.56e-07,8;UBERON:0010011,6.56e-07,8;UBERON:0000454,6.56e-07,8
|phase1_expression=3.36312578920067,0,0,0,1.00179145989269,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.5088736604011,7.40587370980846,8.87363964908651,0,0,0,0,0,0,0,7.36196247390191,5.26523159493594,7.78202357000113,13.9968982357864,9.49734726091938,5.87955836231779,5.271500906003,4.5960939330501,28.6301290598411,32.5602712117229,37.9408137142921,10.1552441552249,9.33173964744578,7.29278718779464,23.451371916116,25.3243174514256,26.4340968653881,18.2669722993674,18.3659468230843,12.4887628702951,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,1.37020655662872,0,11.2816025689267,2.94925055502431,4.26251669636998,2.07553947530453,3.61734337326294,6.23220147819235,5.52933001850572,0,0,0,0.161766849947409,0,0,1.86391761218122,45.9665851308129,33.3020263833394,0.510914110417183,0,0,0,30.1079185203694,35.6850470198529,12.8167439155122,25.2045264278801,26.338692105024,34.2850273523274,30.0146336675352,0,0,0,3.57751155007006,0.260240885925407,1.37941262660084,0.900310649026746,1.9591626318643,2.17716797284249,3.07472928683639,2.90475346135159,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,26.2862435705159,10.7020796874456,1.32167513193519,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,1.81168850196412,1.50801125280162,0.795825888164603,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0.913988100877831,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8119485279613,30.592250200565,0,0,1.26203287766503,0.390438744296638,2.58508077279359,0.477937595905104,0.445597348164788,0.849229592366497,2.02405350837447,2.63030272120181,3.95287777946523,33.7387382242897,0,0,0,0,2.65490276679926,1.94224508923985,3.32555912661226,2.45186603682668,5.02013217897314,6.14870295887855,2.58428293168221,7.99774204850512,4.27796854061666,1.8962205476149,0,6.18813259489121,155.921339435235,1.44048875225048,1.4229455216103,4.50107773566344,12.945837055886,21.7609957474526,24.0241570079097,17.6589670486468,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,24.4761398653873,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0.158167996790568,0.609958401380546,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.909188012978695,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,42.35638819628,37.7466693935885,37.2382083735608,28.8713346337395,26.0331357512844,23.4172108190807,32.4010800111267,31.5224842256954,33.9856806738153,33.6544202638683,0.415149390336707,1.59609949360412,1.87806966329548,2.18796045361465,1.67690530102386,2.20612210140017,1.55572709461131,2.06035057238894,3.53011130550997,0.758091635291392,2.78827229879264,0.754505365544305,2.43467919421694,2.04880487695582,1.43588672389033,1.42888107384922,2.31768651889711,0.578727661391115,2.47251540481984,1.76638704161277,2.40008476669791,1.4198064492747,1.90748951957857,1.59881058295561,1.97629698872194,1.69229215783353,1.28049581010941,1.31534855718921,2.8518863907631,3.36685362994643,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,0.964533054905707,3.49734809113124,2.33931608445408,2.14871054048298,1.14772999241306,1.32354851471709,0.695603506861264
|phase1_expression=3.36312578920067,0,0,0,1.00179145989269,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.5088736604011,7.40587370980846,8.87363964908651,0,0,0,0,0,0,0,7.36196247390191,5.26523159493594,7.78202357000113,13.9968982357864,9.49734726091938,5.87955836231779,5.271500906003,4.5960939330501,28.6301290598411,32.5602712117229,37.9408137142921,10.1552441552249,9.33173964744578,7.29278718779464,23.451371916116,25.3243174514256,26.4340968653881,18.2669722993674,18.3659468230843,12.4887628702951,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.96622188184453,0,0,0,1.54927761754349,0,0,0,0,0,0,1.37020655662872,0,11.2816025689267,2.94925055502431,4.26251669636998,2.07553947530453,3.61734337326294,6.23220147819235,5.52933001850572,0,0,0,0.161766849947409,0,0,1.86391761218122,45.9665851308129,33.3020263833394,0.510914110417183,0,0,0,30.1079185203694,35.6850470198529,12.8167439155122,25.2045264278801,26.338692105024,34.2850273523274,30.0146336675352,0,0,0,3.57751155007006,0.260240885925407,1.37941262660084,0.900310649026746,1.9591626318643,2.17716797284249,3.07472928683639,2.90475346135159,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,26.2862435705159,10.7020796874456,1.32167513193519,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,1.81168850196412,1.50801125280162,0.795825888164603,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0.913988100877831,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8119485279613,30.592250200565,0,0,1.26203287766503,0.390438744296638,2.58508077279359,0.477937595905104,0.445597348164788,0.849229592366497,2.02405350837447,2.63030272120181,3.95287777946523,33.7387382242897,0,0,0,0,2.65490276679926,1.94224508923985,3.32555912661226,2.45186603682668,5.02013217897314,6.14870295887855,2.58428293168221,7.99774204850512,4.27796854061666,1.8962205476149,0,6.18813259489121,155.921339435235,1.44048875225048,1.4229455216103,4.50107773566344,12.945837055886,21.7609957474526,24.0241570079097,17.6589670486468,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,24.4761398653873,0,0.206386867963223,0,0,0,0,0,0,0,4.77335309007557,0.158167996790568,0.609958401380546,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.909188012978695,0.523511883968059,0.518459893167171,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,42.35638819628,37.7466693935885,37.2382083735608,28.8713346337395,26.0331357512844,23.4172108190807,32.4010800111267,31.5224842256954,33.9856806738153,33.6544202638683,0.415149390336707,1.59609949360412,1.87806966329548,2.18796045361465,1.67690530102386,2.20612210140017,1.55572709461131,2.06035057238894,3.53011130550997,0.758091635291392,2.78827229879264,0.754505365544305,2.43467919421694,2.04880487695582,1.43588672389033,1.42888107384922,2.31768651889711,0.578727661391115,2.47251540481984,1.76638704161277,2.40008476669791,1.4198064492747,1.90748951957857,1.59881058295561,1.97629698872194,1.69229215783353,1.28049581010941,1.31534855718921,2.8518863907631,3.36685362994643,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,0.964533054905707,3.49734809113124,2.33931608445408,2.14871054048298,1.14772999241306,1.32354851471709,0.695603506861264
|short_description=p3@Chgb
|short_description=p3@Chgb
}}
}}

Latest revision as of 18:54, 25 September 2015

Short description:p3@Chgb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chgb_5end
Coexpression cluster:MCL_coexpression_mm9:278
Association with transcript: 327bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end
EntrezGene:Chgb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chgb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D711.28
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B245.97
cerebellum, neonate N30.CNhs11135.1395-42I233.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A430.11
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F112.82
cortex, adult.CNhs10473.12-14D525.20
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F234.29
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E826.29
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C226.81
medulla oblongata, neonate N30.CNhs11200.1396-42A330.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G8155.92
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F621.76
pituitary gland, embryo E17.CNhs11039.1265-44F524.02
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C924.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.90e-1623
neuroblast (sensu Vertebrata)5.90e-1623
neuron3.92e-1433
neuronal stem cell3.92e-1433
neuroblast3.92e-1433
electrically signaling cell3.92e-1433
electrically responsive cell2.54e-1039
electrically active cell2.54e-1039
ectodermal cell1.26e-0844
neurectodermal cell1.26e-0844
neural cell1.92e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.57e-3454
central nervous system4.51e-3373
neurectoderm1.55e-3264
neural plate1.55e-3264
presumptive neural plate1.55e-3264
neural tube6.75e-3252
neural rod6.75e-3252
future spinal cord6.75e-3252
neural keel6.75e-3252
nervous system1.66e-3175
brain2.96e-2847
future brain2.96e-2847
ecto-epithelium9.82e-2873
regional part of brain2.70e-2746
ectoderm-derived structure3.62e-2795
ectoderm3.62e-2795
presumptive ectoderm3.62e-2795
pre-chordal neural plate2.33e-2649
anterior neural tube1.24e-2540
regional part of forebrain9.67e-2539
forebrain9.67e-2539
future forebrain9.67e-2539
structure with developmental contribution from neural crest3.08e-2492
gray matter6.79e-2234
brain grey matter2.07e-1829
regional part of telencephalon2.07e-1829
telencephalon2.07e-1829
cerebral cortex9.39e-1321
cerebral hemisphere9.39e-1321
pallium9.39e-1321
regional part of cerebral cortex2.07e-1017
occipital lobe6.16e-1010
visual cortex6.16e-1010
neocortex6.16e-1010
diencephalon3.48e-0710
future diencephalon3.48e-0710
basal ganglion6.56e-078
nuclear complex of neuraxis6.56e-078
aggregate regional part of brain6.56e-078
collection of basal ganglia6.56e-078
cerebral subcortex6.56e-078
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