FFCP PHASE1:Mm9::chr4:154460687..154460719,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76866 | |EntrezGene=76866 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1286 | |||
|TSSclassifier=NA | |||
|UniProt=B1AUE8,B1AUE7,E9Q2M8 | |UniProt=B1AUE8,B1AUE7,E9Q2M8 | ||
|association_with_transcript=0bp_to_ENSMUST00000127457,ENSMUST00000155775,ENSMUST00000172149_5end | |association_with_transcript=0bp_to_ENSMUST00000127457,ENSMUST00000155775,ENSMUST00000172149_5end | ||
|cluster_id=chr4:154460687..154460719,+ | |||
|description=CAGE_peak_1_at_Morn1_5end | |description=CAGE_peak_1_at_Morn1_5end | ||
|id=chr4:154460687..154460719,+ | |id=chr4:154460687..154460719,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.07e-18!63;UBERON:0002346!1.77e-15!71;UBERON:0003075!1.77e-15!71;UBERON:0007284!1.77e-15!71;UBERON:0003056!6.01e-15!49;UBERON:0001049!9.13e-15!52;UBERON:0005068!9.13e-15!52;UBERON:0006241!9.13e-15!52;UBERON:0007135!9.13e-15!52;UBERON:0002616!1.03e-14!49;UBERON:0000955!1.16e-14!50;UBERON:0006238!1.16e-14!50;UBERON:0004121!6.37e-14!102;UBERON:0000924!6.37e-14!102;UBERON:0006601!6.37e-14!102;UBERON:0001017!6.14e-13!73;UBERON:0005743!6.14e-13!73;UBERON:0003080!2.20e-12!40;UBERON:0002780!5.16e-12!39;UBERON:0001890!5.16e-12!39;UBERON:0006240!5.16e-12!39;UBERON:0000073!8.98e-12!75;UBERON:0001016!8.98e-12!75;UBERON:0002020!9.66e-08!34;UBERON:0002791!2.72e-07!29;UBERON:0003528!2.72e-07!29;UBERON:0001893!2.72e-07!29;UBERON:0007811!3.30e-07!86;UBERON:0002619!6.40e-07!17;UBERON:0000153!8.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.08e-16,73;UBERON:0002346,5.25e-16,64;UBERON:0003075,5.25e-16,64;UBERON:0007284,5.25e-16,64;UBERON:0000073,3.48e-15,54;UBERON:0003056,5.95e-15,49;UBERON:0001049,9.04e-15,52;UBERON:0005068,9.04e-15,52;UBERON:0006241,9.04e-15,52;UBERON:0007135,9.04e-15,52;UBERON:0002616,2.76e-14,46;UBERON:0000955,3.14e-14,47;UBERON:0006238,3.14e-14,47;UBERON:0004121,5.40e-14,95;UBERON:0000924,5.40e-14,95;UBERON:0006601,5.40e-14,95;UBERON:0001017,6.09e-13,73;UBERON:0003080,2.18e-12,40;UBERON:0002780,5.12e-12,39;UBERON:0001890,5.12e-12,39;UBERON:0006240,5.12e-12,39;UBERON:0001016,8.91e-12,75;UBERON:0010314,3.41e-10,92;UBERON:0002020,9.61e-08,34;UBERON:0003528,2.70e-07,29;UBERON:0002791,2.70e-07,29;UBERON:0001893,2.70e-07,29;UBERON:0002619,6.38e-07,17 | |||
|phase1_expression=16.4953312517938,2.44282785347553,3.63999391511629,1.20985684522732,1.50268718983904,2.68606835059024,3.97141489012394,0.903863264091034,0.422366166455,0,0.34243593645101,1.19658238493005,0.513602189793617,0.611942816932982,3.66420737997229,4.45445588257617,2.79824751251259,0.946386496074713,1.91960207048034,2.54633791078818,17.1787446105161,1.68794617041505,1.82839852397255,4.7997726838022,5.04700418347774,2.8711598205751,0,2.37018355954478,2.47030445293286,1.00812051903972,1.10865255327652,15.2407361630311,11.6862309641068,15.8481681015439,4.91047753577167,3.98963148860382,4.69589519403449,0,0,0.523523743973798,0,0,0,0.629484089877886,1.72340783073175,0.734187008646726,5.47673941043627,7.63088047331563,8.34807494390993,7.77719596297134,5.31948402176378,11.5002051491977,1.34226084846189,0.725362142011344,0.672187598284928,1.28629718017973,2.57880095944881,0.515672092277442,5.26022798234954,6.34789175126439,3.80298842103708,1.0165335962074,0.889294796111139,4.94944844504769,2.96659908770092,4.2628806896766,8.38880309451533,28.432154593795,4.25127410464758,3.10513658162888,2.10324961351382,5.42736870367227,7.73039893330647,4.28717797252339,4.12135525378416,6.43453150627015,6.60695285996332,7.78892762319645,4.91540906419979,5.27545150920775,6.31264740856627,5.2091337055676,6.70039197603314,9.56696437053856,9.77908785771585,5.00868595305235,5.83723891276322,6.15118171223492,1.74170244666323,1.96486056277642,11.3047150593654,3.44169550792555,2.03991400112325,7.55584468292944,3.89865850468601,4.48026887097336,4.49422144421606,1.1930122580464,1.29893002301434,3.18005617059306,11.2674735821344,6.41632387071589,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,1.01104889002957,6.05174562511018,1.03575153458869,7.42210695324124,4.51061849591953,3.95805121805784,2.30615497256059,4.82312449768392,6.70255630673517,5.78066320116507,2.96633961281249,4.19338135067744,1.76922110389975,3.88240439873782,4.19598885074748,3.39412677194655,0,10.8328894894272,10.6817820474862,1.78819938646014,1.31796636956512,1.79970819298022,1.39777249780371,8.08869452786043,6.40500843946077,7.16229807043327,10.9509321721134,10.7400492078739,7.89594569326328,10.3834408363365,6.21220119486929,5.97153458928446,8.33985102831127,10.9429765060966,5.59517904739626,4.13823787980251,4.86167750474443,7.23383125611432,9.59314638033723,11.2740073850668,10.6819965998091,15.2634988736019,2.58681591519411,4.16033376369202,5.63043597324636,2.84954452155847,7.22922847986555,5.2237824978325,8.0255033199098,7.56330213910274,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,3.04883877975425,3.6012412292203,2.3674473558521,3.73852040320067,3.08534225774756,3.95307706075693,4.82892122519315,3.38619492864792,2.63295759861569,2.95501435342371,3.64809642956351,3.65499968563331,2.41505126820156,3.48936688776967,11.1453672738987,7.20332286654991,1.65209391491899,2.11560453330835,4.69234151177515,6.0381534683714,3.47942145569652,4.84040459096022,4.22518283305254,3.23383564391351,3.32170343081158,3.78807595865225,3.77002813200404,5.37182474511107,4.48417400373976,4.49409704327111,2.59365659849633,4.18196673834171,3.41402221715547,5.25543158004753,4.50830942692322,6.92414514674068,4.65485969202302,7.78507600782536,8.72664212314751,8.11855813887812,5.80895293013087,6.91024117962083,5.92905254174298,1.83529616287703,1.37591296579242,1.57403478669398,2.84004169943904,0.72353147925725,4.07401362850272,3.74004978686054,5.5125977103512,3.29473695825698,0,3.34926852901653,4.36852742360385,2.77836765741823,2.51156378930677,1.4473305640901,8.86815312799702,4.35830247072115,3.7481944581666,5.94107800213158,6.80601720036656,6.53274404023081,8.33152743101048,6.82967767502296,8.19702749352193,8.41565820665345,6.85655505227195,10.1595255123758,6.56202931090403,8.96824163205372,3.01582567878545,3.80733978673097,4.42587845717133,6.89841865761831,8.18808008937739,6.21221938938677,1.47541450839008,5.04941854408746,3.15508219416257,4.29482618726302,2.15423397732799,2.62865677747807,3.7875774594007,1.98153571552183,2.02405350837447,3.79932615284705,2.37172666767914,5.14114106274891,8.23252494207958,5.1639025063504,8.63300884573953,12.2077890999676,3.98235415019888,5.09839335925461,5.13950046840077,3.96070667487386,3.54362271456927,6.14870295887855,8.78656196771952,6.5436071305951,7.84294232446387,5.37262488490887,4.21674434299995,8.25084345985495,11.234506989875,7.92268813737765,8.92574918101006,9.00215547132688,9.75371285032505,12.3074484145429,15.4676079365994,15.8321773539592,1.64270195644597,4.2366414172764,3.74898276693435,4.28704257647848,5.00539722757307,4.28221766989907,3.9392873521035,4.92422699235184,3.78925087618806,5.7481843623258,2.22132145037209,3.50857675537478,3.33350149265481,3.01389531207506,2.05041341581538,2.0590035588587,1.5298058699447,1.95932033253121,2.9021994498929,0.954670618015114,5.852215881251,4.47302827679067,5.07625101862466,7.10900206449194,7.20596460362386,5.12484516262319,5.2898211664215,4.4498510137285,4.66613903850454,3.10669656543463,27.6209539955253,3.88743019714345,4.96375471371293,4.4723773319131,4.64975364519832,6.75824501963113,5.98521917093345,7.94246747548096,8.17902886520545,27.7821738949907,32.8354207133967,1.26404448251271,2.22997736819181,4.31386020092274,2.98817892848929,2.8644271306797,2.58285761215644,2.40390899039938,1.32920574457119,2.1202954489111,2.209997392995,2.62148081355785,1.8516997340553,1.53938946624527,3.74006086981021,6.34845074122592,1.10992976687032,2.06341870201794,3.02192309455341,4.44336066274038,3.00291960721891,6.41030684935428,3.00115730710692,6.52043735245972,7.34177395402186,12.4287813856938,11.4579102687879,11.3423100346834,9.59115527678899,12.8416962556249,8.10027000278167,8.55610286126019,10.4222754066367,10.3552062350364,1.14166082342594,4.38927360741134,4.78054096111576,4.86213434136588,2.30574478890781,3.30918315210025,5.778414922842,6.59312183164461,5.77654577265267,4.54854981174835,8.36481689637791,7.35642731405697,7.02311306024118,7.68301828858431,5.80098236451694,5.71552429539688,6.14186927507734,5.59436739344745,7.00546031365621,7.21274708658547,9.94320831917705,6.92155644021416,5.00715998889374,6.24989591519013,5.27012530325851,6.00763716030903,6.0366231048015,4.73525480588117,7.4692262615224,3.36685362994643,4.62676570684279,5.02372860115374,4.91077251803627,4.95797891795091,7.13754460630223,7.24450676020043,6.31615342802603,6.23126056740065,2.67803664896381,3.08827986767322,2.55054619182464 | |phase1_expression=16.4953312517938,2.44282785347553,3.63999391511629,1.20985684522732,1.50268718983904,2.68606835059024,3.97141489012394,0.903863264091034,0.422366166455,0,0.34243593645101,1.19658238493005,0.513602189793617,0.611942816932982,3.66420737997229,4.45445588257617,2.79824751251259,0.946386496074713,1.91960207048034,2.54633791078818,17.1787446105161,1.68794617041505,1.82839852397255,4.7997726838022,5.04700418347774,2.8711598205751,0,2.37018355954478,2.47030445293286,1.00812051903972,1.10865255327652,15.2407361630311,11.6862309641068,15.8481681015439,4.91047753577167,3.98963148860382,4.69589519403449,0,0,0.523523743973798,0,0,0,0.629484089877886,1.72340783073175,0.734187008646726,5.47673941043627,7.63088047331563,8.34807494390993,7.77719596297134,5.31948402176378,11.5002051491977,1.34226084846189,0.725362142011344,0.672187598284928,1.28629718017973,2.57880095944881,0.515672092277442,5.26022798234954,6.34789175126439,3.80298842103708,1.0165335962074,0.889294796111139,4.94944844504769,2.96659908770092,4.2628806896766,8.38880309451533,28.432154593795,4.25127410464758,3.10513658162888,2.10324961351382,5.42736870367227,7.73039893330647,4.28717797252339,4.12135525378416,6.43453150627015,6.60695285996332,7.78892762319645,4.91540906419979,5.27545150920775,6.31264740856627,5.2091337055676,6.70039197603314,9.56696437053856,9.77908785771585,5.00868595305235,5.83723891276322,6.15118171223492,1.74170244666323,1.96486056277642,11.3047150593654,3.44169550792555,2.03991400112325,7.55584468292944,3.89865850468601,4.48026887097336,4.49422144421606,1.1930122580464,1.29893002301434,3.18005617059306,11.2674735821344,6.41632387071589,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,1.01104889002957,6.05174562511018,1.03575153458869,7.42210695324124,4.51061849591953,3.95805121805784,2.30615497256059,4.82312449768392,6.70255630673517,5.78066320116507,2.96633961281249,4.19338135067744,1.76922110389975,3.88240439873782,4.19598885074748,3.39412677194655,0,10.8328894894272,10.6817820474862,1.78819938646014,1.31796636956512,1.79970819298022,1.39777249780371,8.08869452786043,6.40500843946077,7.16229807043327,10.9509321721134,10.7400492078739,7.89594569326328,10.3834408363365,6.21220119486929,5.97153458928446,8.33985102831127,10.9429765060966,5.59517904739626,4.13823787980251,4.86167750474443,7.23383125611432,9.59314638033723,11.2740073850668,10.6819965998091,15.2634988736019,2.58681591519411,4.16033376369202,5.63043597324636,2.84954452155847,7.22922847986555,5.2237824978325,8.0255033199098,7.56330213910274,0.702213187313235,0.772043721344145,0.568326998791185,3.93538967817454,3.04883877975425,3.6012412292203,2.3674473558521,3.73852040320067,3.08534225774756,3.95307706075693,4.82892122519315,3.38619492864792,2.63295759861569,2.95501435342371,3.64809642956351,3.65499968563331,2.41505126820156,3.48936688776967,11.1453672738987,7.20332286654991,1.65209391491899,2.11560453330835,4.69234151177515,6.0381534683714,3.47942145569652,4.84040459096022,4.22518283305254,3.23383564391351,3.32170343081158,3.78807595865225,3.77002813200404,5.37182474511107,4.48417400373976,4.49409704327111,2.59365659849633,4.18196673834171,3.41402221715547,5.25543158004753,4.50830942692322,6.92414514674068,4.65485969202302,7.78507600782536,8.72664212314751,8.11855813887812,5.80895293013087,6.91024117962083,5.92905254174298,1.83529616287703,1.37591296579242,1.57403478669398,2.84004169943904,0.72353147925725,4.07401362850272,3.74004978686054,5.5125977103512,3.29473695825698,0,3.34926852901653,4.36852742360385,2.77836765741823,2.51156378930677,1.4473305640901,8.86815312799702,4.35830247072115,3.7481944581666,5.94107800213158,6.80601720036656,6.53274404023081,8.33152743101048,6.82967767502296,8.19702749352193,8.41565820665345,6.85655505227195,10.1595255123758,6.56202931090403,8.96824163205372,3.01582567878545,3.80733978673097,4.42587845717133,6.89841865761831,8.18808008937739,6.21221938938677,1.47541450839008,5.04941854408746,3.15508219416257,4.29482618726302,2.15423397732799,2.62865677747807,3.7875774594007,1.98153571552183,2.02405350837447,3.79932615284705,2.37172666767914,5.14114106274891,8.23252494207958,5.1639025063504,8.63300884573953,12.2077890999676,3.98235415019888,5.09839335925461,5.13950046840077,3.96070667487386,3.54362271456927,6.14870295887855,8.78656196771952,6.5436071305951,7.84294232446387,5.37262488490887,4.21674434299995,8.25084345985495,11.234506989875,7.92268813737765,8.92574918101006,9.00215547132688,9.75371285032505,12.3074484145429,15.4676079365994,15.8321773539592,1.64270195644597,4.2366414172764,3.74898276693435,4.28704257647848,5.00539722757307,4.28221766989907,3.9392873521035,4.92422699235184,3.78925087618806,5.7481843623258,2.22132145037209,3.50857675537478,3.33350149265481,3.01389531207506,2.05041341581538,2.0590035588587,1.5298058699447,1.95932033253121,2.9021994498929,0.954670618015114,5.852215881251,4.47302827679067,5.07625101862466,7.10900206449194,7.20596460362386,5.12484516262319,5.2898211664215,4.4498510137285,4.66613903850454,3.10669656543463,27.6209539955253,3.88743019714345,4.96375471371293,4.4723773319131,4.64975364519832,6.75824501963113,5.98521917093345,7.94246747548096,8.17902886520545,27.7821738949907,32.8354207133967,1.26404448251271,2.22997736819181,4.31386020092274,2.98817892848929,2.8644271306797,2.58285761215644,2.40390899039938,1.32920574457119,2.1202954489111,2.209997392995,2.62148081355785,1.8516997340553,1.53938946624527,3.74006086981021,6.34845074122592,1.10992976687032,2.06341870201794,3.02192309455341,4.44336066274038,3.00291960721891,6.41030684935428,3.00115730710692,6.52043735245972,7.34177395402186,12.4287813856938,11.4579102687879,11.3423100346834,9.59115527678899,12.8416962556249,8.10027000278167,8.55610286126019,10.4222754066367,10.3552062350364,1.14166082342594,4.38927360741134,4.78054096111576,4.86213434136588,2.30574478890781,3.30918315210025,5.778414922842,6.59312183164461,5.77654577265267,4.54854981174835,8.36481689637791,7.35642731405697,7.02311306024118,7.68301828858431,5.80098236451694,5.71552429539688,6.14186927507734,5.59436739344745,7.00546031365621,7.21274708658547,9.94320831917705,6.92155644021416,5.00715998889374,6.24989591519013,5.27012530325851,6.00763716030903,6.0366231048015,4.73525480588117,7.4692262615224,3.36685362994643,4.62676570684279,5.02372860115374,4.91077251803627,4.95797891795091,7.13754460630223,7.24450676020043,6.31615342802603,6.23126056740065,2.67803664896381,3.08827986767322,2.55054619182464 | ||
|short_description=p1@Morn1 | |short_description=p1@Morn1 | ||
}} | }} |
Latest revision as of 19:43, 26 September 2015
Short description: | p1@Morn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Morn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1286 |
Association with transcript: | 0bp_to_ENSMUST00000127457, ENSMUST00000155775, ENSMUST00000172149_5end |
EntrezGene: | Morn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.08e-16 | 73 |
neurectoderm | 5.25e-16 | 64 |
neural plate | 5.25e-16 | 64 |
presumptive neural plate | 5.25e-16 | 64 |
regional part of nervous system | 3.48e-15 | 54 |
pre-chordal neural plate | 5.95e-15 | 49 |
neural tube | 9.04e-15 | 52 |
neural rod | 9.04e-15 | 52 |
future spinal cord | 9.04e-15 | 52 |
neural keel | 9.04e-15 | 52 |
regional part of brain | 2.76e-14 | 46 |
brain | 3.14e-14 | 47 |
future brain | 3.14e-14 | 47 |
ectoderm-derived structure | 5.40e-14 | 95 |
ectoderm | 5.40e-14 | 95 |
presumptive ectoderm | 5.40e-14 | 95 |
central nervous system | 6.09e-13 | 73 |
anterior neural tube | 2.18e-12 | 40 |
regional part of forebrain | 5.12e-12 | 39 |
forebrain | 5.12e-12 | 39 |
future forebrain | 5.12e-12 | 39 |
nervous system | 8.91e-12 | 75 |
structure with developmental contribution from neural crest | 3.41e-10 | 92 |
gray matter | 9.61e-08 | 34 |
brain grey matter | 2.70e-07 | 29 |
regional part of telencephalon | 2.70e-07 | 29 |
telencephalon | 2.70e-07 | 29 |
regional part of cerebral cortex | 6.38e-07 | 17 |