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FFCP PHASE1:Mm9::chr11:69183184..69183208,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216848
|EntrezGene=216848
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9Q614,B1AR17
|UniProt=E9Q614,B1AR17
|association_with_transcript=-256bp_to_ENSMUST00000092971,uc007jpy.1_5end
|association_with_transcript=-256bp_to_ENSMUST00000092971,uc007jpy.1_5end
|cluster_id=chr11:69183184..69183208,-
|description=CAGE_peak_5_at_Chd3_5end
|description=CAGE_peak_5_at_Chd3_5end
|id=chr11:69183184..69183208,-
|id=chr11:69183184..69183208,-
|ontology_enrichment_celltype=CL:0000117!4.09e-08!23;CL:0000337!4.09e-08!23
|ontology_enrichment_celltype=CL:0000117!4.09e-08!23;CL:0000337!4.09e-08!23
|ontology_enrichment_celltype_v019_2=CL:0002610,5.12e-08,3;CL:0002609,7.26e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002780!5.98e-16!39;UBERON:0001890!5.98e-16!39;UBERON:0006240!5.98e-16!39;UBERON:0003080!9.79e-16!40;UBERON:0000955!1.86e-15!50;UBERON:0006238!1.86e-15!50;UBERON:0002616!7.97e-15!49;UBERON:0002020!9.32e-15!34;UBERON:0002791!7.03e-14!29;UBERON:0003528!7.03e-14!29;UBERON:0001893!7.03e-14!29;UBERON:0001049!1.77e-13!52;UBERON:0005068!1.77e-13!52;UBERON:0006241!1.77e-13!52;UBERON:0007135!1.77e-13!52;UBERON:0003056!2.55e-13!49;UBERON:0000033!8.01e-12!63;UBERON:0000956!9.99e-12!21;UBERON:0001869!9.99e-12!21;UBERON:0000203!9.99e-12!21;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0000073!1.21e-09!75;UBERON:0001016!1.21e-09!75;UBERON:0000153!1.72e-09!94;UBERON:0002346!1.75e-09!71;UBERON:0003075!1.75e-09!71;UBERON:0007284!1.75e-09!71;UBERON:0002619!3.84e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10;UBERON:0004121!5.77e-08!102;UBERON:0000924!5.77e-08!102;UBERON:0006601!5.77e-08!102;UBERON:0007811!6.15e-08!86
|ontology_enrichment_uberon=UBERON:0002780!5.98e-16!39;UBERON:0001890!5.98e-16!39;UBERON:0006240!5.98e-16!39;UBERON:0003080!9.79e-16!40;UBERON:0000955!1.86e-15!50;UBERON:0006238!1.86e-15!50;UBERON:0002616!7.97e-15!49;UBERON:0002020!9.32e-15!34;UBERON:0002791!7.03e-14!29;UBERON:0003528!7.03e-14!29;UBERON:0001893!7.03e-14!29;UBERON:0001049!1.77e-13!52;UBERON:0005068!1.77e-13!52;UBERON:0006241!1.77e-13!52;UBERON:0007135!1.77e-13!52;UBERON:0003056!2.55e-13!49;UBERON:0000033!8.01e-12!63;UBERON:0000956!9.99e-12!21;UBERON:0001869!9.99e-12!21;UBERON:0000203!9.99e-12!21;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0000073!1.21e-09!75;UBERON:0001016!1.21e-09!75;UBERON:0000153!1.72e-09!94;UBERON:0002346!1.75e-09!71;UBERON:0003075!1.75e-09!71;UBERON:0007284!1.75e-09!71;UBERON:0002619!3.84e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10;UBERON:0004121!5.77e-08!102;UBERON:0000924!5.77e-08!102;UBERON:0006601!5.77e-08!102;UBERON:0007811!6.15e-08!86
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.24e-30,21;UBERON:0001869,1.24e-30,21;UBERON:0000203,1.24e-30,21;UBERON:0002021,2.19e-27,10;UBERON:0000411,2.19e-27,10;UBERON:0001950,2.19e-27,10;UBERON:0003528,6.51e-27,29;UBERON:0002791,6.51e-27,29;UBERON:0001893,6.51e-27,29;UBERON:0002780,1.10e-23,39;UBERON:0001890,1.10e-23,39;UBERON:0006240,1.10e-23,39;UBERON:0003080,5.62e-23,40;UBERON:0002020,2.49e-22,34;UBERON:0002619,5.70e-22,17;UBERON:0000073,1.67e-21,54;UBERON:0000955,5.53e-21,47;UBERON:0006238,5.53e-21,47;UBERON:0002616,2.27e-19,46;UBERON:0003056,6.73e-18,49;UBERON:0001017,1.22e-17,73;UBERON:0001016,5.07e-17,75;UBERON:0001049,1.35e-16,52;UBERON:0005068,1.35e-16,52;UBERON:0006241,1.35e-16,52;UBERON:0007135,1.35e-16,52;UBERON:0002346,1.28e-12,64;UBERON:0003075,1.28e-12,64;UBERON:0007284,1.28e-12,64;UBERON:0004121,2.91e-12,95;UBERON:0000924,2.91e-12,95;UBERON:0006601,2.91e-12,95;UBERON:0010371,1.69e-10,73;UBERON:0004684,5.12e-08,3;UBERON:0002275,5.12e-08,3;UBERON:0010314,2.10e-07,92
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,2.16009501330705,1.26194976810829,0.285650984403804,0.662605622854841,0.489963196859816,0.766763768145891,2.75765635983006,1.10115880999389,1.65993539510744,1.99688493233117,0.527545150920775,0.457438218012048,0,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,1.88481528169297,5.56237824615285,11.5071955798649,0.83115217823824,3.0825839982874,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0.945530400839096,0.703804496655795,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,2.52347938276953,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,1.52770577197669,2.11221223459652,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0.283076530788832,0,0,0,1.60660658210904,0,0.712262414669021,0.651547837414304,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.540183282093931,1.16422815404479,0.643011105094777,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0.291480836629851,0,0.170870880797853,1.44470807574256,0.185194527369712,0,0.410082683163076,0,0,0,0,0,1.26534397432454,0.609958401380546,0.540026704109006,0.836353184057875,0.218362563746178,0.404593039154462,0,0,0,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.718976700153791,0.389762468933385,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,7.34177395402186,5.9842280745933,6.30185064783336,10.8267504876523,3.42541259885321,6.7985450765073,4.05013500139084,4.05289082901798,2.71885445390523,3.62432218226274,0.415149390336707,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.128050304809739,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0.658765662907314,0.423073039458382,0.73171189149109,0,0.407412341537585,0,0.474540072496697,0,0.409231043169689,0.464810523557898,0.192906610981141,1.49886346762768,0,0.859484216193193,0.191288332068843,0,0
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,2.16009501330705,1.26194976810829,0.285650984403804,0.662605622854841,0.489963196859816,0.766763768145891,2.75765635983006,1.10115880999389,1.65993539510744,1.99688493233117,0.527545150920775,0.457438218012048,0,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,1.37250180845588,1.88481528169297,5.56237824615285,11.5071955798649,0.83115217823824,3.0825839982874,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.360124259610698,0.60281927134286,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0.945530400839096,0.703804496655795,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,2.52347938276953,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,1.01825663922657,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,1.52770577197669,2.11221223459652,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0.283076530788832,0,0,0,1.60660658210904,0,0.712262414669021,0.651547837414304,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.540183282093931,1.16422815404479,0.643011105094777,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0.291480836629851,0,0.170870880797853,1.44470807574256,0.185194527369712,0,0.410082683163076,0,0,0,0,0,1.26534397432454,0.609958401380546,0.540026704109006,0.836353184057875,0.218362563746178,0.404593039154462,0,0,0,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.718976700153791,0.389762468933385,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,7.34177395402186,5.9842280745933,6.30185064783336,10.8267504876523,3.42541259885321,6.7985450765073,4.05013500139084,4.05289082901798,2.71885445390523,3.62432218226274,0.415149390336707,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.128050304809739,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0.658765662907314,0.423073039458382,0.73171189149109,0,0.407412341537585,0,0.474540072496697,0,0.409231043169689,0.464810523557898,0.192906610981141,1.49886346762768,0,0.859484216193193,0.191288332068843,0,0
|short_description=p5@Chd3
|short_description=p5@Chd3
}}
}}

Latest revision as of 00:01, 2 October 2015

Short description:p5@Chd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Chd3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -256bp_to_ENSMUST00000092971, uc007jpy.1_5end
EntrezGene:Chd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Chd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron5.12e-083
neuron of cerebral cortex7.26e-076

Uber anatomy
Ontology termp-valuen
cerebral cortex1.24e-3021
cerebral hemisphere1.24e-3021
pallium1.24e-3021
occipital lobe2.19e-2710
visual cortex2.19e-2710
neocortex2.19e-2710
brain grey matter6.51e-2729
regional part of telencephalon6.51e-2729
telencephalon6.51e-2729
regional part of forebrain1.10e-2339
forebrain1.10e-2339
future forebrain1.10e-2339
anterior neural tube5.62e-2340
gray matter2.49e-2234
regional part of cerebral cortex5.70e-2217
regional part of nervous system1.67e-2154
brain5.53e-2147
future brain5.53e-2147
regional part of brain2.27e-1946
pre-chordal neural plate6.73e-1849
central nervous system1.22e-1773
nervous system5.07e-1775
neural tube1.35e-1652
neural rod1.35e-1652
future spinal cord1.35e-1652
neural keel1.35e-1652
neurectoderm1.28e-1264
neural plate1.28e-1264
presumptive neural plate1.28e-1264
ectoderm-derived structure2.91e-1295
ectoderm2.91e-1295
presumptive ectoderm2.91e-1295
ecto-epithelium1.69e-1073
raphe nuclei5.12e-083
reticular formation5.12e-083
structure with developmental contribution from neural crest2.10e-0792
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