Personal tools

FFCP PHASE1:Mm9::chr4:15193249..15193320,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=28
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:15193249..15193320,+
|description=CAGE_peak_at_chr4:15193249..15193320,+
|description=CAGE_peak_at_chr4:15193249..15193320,+
|id=chr4:15193249..15193320,+
|id=chr4:15193249..15193320,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!2.05e-09!25;UBERON:0002330!2.05e-09!25;UBERON:0002107!7.27e-08!22;UBERON:0007499!7.27e-08!22;UBERON:0006925!7.27e-08!22;UBERON:0009497!7.27e-08!22;UBERON:0000015!7.27e-08!22;UBERON:0002423!7.27e-08!22;UBERON:0006235!7.27e-08!22;UBERON:0008835!7.27e-08!22;UBERON:0003894!7.27e-08!22;UBERON:0004161!7.27e-08!22;UBERON:0008836!7.27e-08!22;UBERON:0009854!4.63e-07!23;UBERON:0009856!4.63e-07!23;UBERON:0007023!4.79e-07!51;UBERON:0003914!8.09e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.03e-09,25;UBERON:0002330,2.03e-09,25;UBERON:0002107,7.20e-08,22;UBERON:0007499,7.20e-08,22;UBERON:0006925,7.20e-08,22;UBERON:0009497,7.20e-08,22;UBERON:0000015,7.20e-08,22;UBERON:0002423,7.20e-08,22;UBERON:0006235,7.20e-08,22;UBERON:0008835,7.20e-08,22;UBERON:0003894,7.20e-08,22;UBERON:0004161,7.20e-08,22;UBERON:0008836,7.20e-08,22;UBERON:0009854,4.59e-07,23;UBERON:0009856,4.59e-07,23;UBERON:0007023,4.75e-07,51;UBERON:0003914,8.02e-07,47
|phase1_expression=3.52327463630547,4.53668029931169,5.0049916332849,11.4936400296595,11.520601788766,1.00727563147134,0,42.9980667060449,14.6420271037733,18.2570330531155,5.99262888789267,7.8974437405383,13.1824562047028,15.9979336426765,7.99463428357591,7.49158489342356,12.5921138063066,8.83294063003066,9.32378148519024,5.09267582157636,7.313722952992,0.794327609607082,0.783599367416806,2.3998863419011,2.06468352960453,2.8711598205751,3.87685796543167,1.72376986148711,3.99049180858385,2.52030129759931,1.77384408524244,2.54012269383853,3.69038872550742,0,0,0.664938581433969,1.02084678131185,0.418531630736908,0,0,0,0,0,7.93149953246137,5.67710814829281,6.60768307782054,6.25913075478431,1.52617609466313,2.41654801007919,3.4997381833371,2.37976916763116,1.43752564364972,13.9259563027921,42.7963663786693,7.39406358113421,7.20326420900652,10.601737277734,9.28209766099396,0.404632921719196,1.05798195854407,3.1691570175309,4.06613438482959,2.66788438833342,3.1496490104849,1.97773272513395,3.5524005747305,5.09320187881288,4.2264013585371,0.518448061542388,1.35005938331691,0.841299845405528,3.71346279724945,3.09215957332259,0.489963196859816,0.479227355091182,0.919218786610021,0,6.76742891851495,6.14426133024974,0.791317726381163,1.09785172322892,1.04182674111352,6.70039197603314,8.4414391504752,11.6126668310376,2.35702868378934,1.99320353118744,2.05039390407831,2.27178579999552,3.77857800533928,24.9283460283443,13.7667820317022,6.11974200336975,4.31762553310254,9.74664626171504,6.2723764193627,13.3422199125164,2.72688516124892,1.55871602761721,1.41335829804136,10.563256483251,0,0,0,3.030874574157,3.80039798212648,6.0662933401774,7.87868770061514,9.32176381129818,8.46120192669501,3.46970653532272,1.82679286987285,3.45923245884088,3.76806601381556,4.46837087115678,9.67632753238501,6.42706916109372,9.10975948595443,7.07688441559899,10.3530783966342,12.8088080707028,11.1521308221101,1.86391761218122,13.1751358655196,16.127396424636,4.34276993854605,0.239630249011841,1.19980546198682,0.381210681219194,6.74057877321702,12.3525162761029,2.89005009859588,14.0797699355744,12.5300574091862,7.89594569326328,9.24775199486219,2.34230536855727,19.6563013563947,78.5967778728728,256.107738613839,1.43132487258974,3.44853156650209,2.88099407688559,2.71268672104287,3.81004395247436,3.20284300712124,4.68508622798644,60.0191820114516,0.646703978798527,1.13463648100692,1.75951124163949,4.16471891612392,3.05851974148158,2.43776516565517,4.7329891373827,1.59227413454795,0,0.51469581422943,1.98914449576915,3.72826390563903,3.51789089971644,4.68161359798639,3.78791576936336,3.54175617145327,2.77680803197281,2.32533944750408,6.9751084363901,3.15266424391358,3.78487654801005,6.07419617092652,9.40398190731926,9.5029991826466,5.92785311285837,9.26024289446565,8.83217783969334,2.6755199218614,6.60837565967596,6.61126416658861,0.639864751605702,0.928946687441754,2.19074684247559,4.03367049246685,8.00560957841533,9.13083005340284,6.64340686162316,12.1877226495768,12.8180956488137,14.7227789310452,11.6978452271472,10.7858329038507,5.40345124686736,5.97423819763102,2.27601481143698,1.71372768914593,0,0.814605311381257,1.74557238450863,2.31448205638051,8.91635173452028,14.7610147979602,21.351826986427,10.3653617694312,8.00422093135302,6.84064933435986,8.64859578498093,11.2431056192427,10.3458661908136,10.1294407096015,10.9489116266011,11.2201493605816,9.72811360650212,13.1789478330279,20.1275489138296,22.3284568601102,19.3463357331028,19.1959947239805,12.9166137735777,11.5786445127208,4.98833613449833,2.08440552947533,1.30371981153621,1.69745085775188,1.17345124144251,1.50755631697634,1.90434912708811,2.73187107000918,4.25614889086716,2.21464689648775,3.6674596791222,3.93271955317771,5.52591941970866,3.7608755231193,3.01582567878545,1.63171705145613,23.1129208318947,14.9005843004556,9.79358598925531,3.7507739709505,2.13115428989678,31.3063949733423,1.57754109708128,1.56175497718655,2.80050417052639,2.62865677747807,2.00518806674155,2.26461224631066,0.809621403349789,2.04579100537918,2.76701444562566,7.71171159412337,6.81312408999689,1.42452482933804,2.60619134965722,7.75359577970917,38.4960901185892,2.91336763385978,3.62788268357701,3.96070667487386,3.2483208216885,6.7635732547664,18.0899805217755,18.1766864738753,8.55593708123331,12.9575070753685,28.4630243152497,36.0974401368654,5.44703369206061,3.06103859853227,3.88076051348264,7.28745919107414,7.27094957933322,6.0645397984704,6.58196082408484,3.34911444026059,4.22409074514679,15.8874053147865,63.953235435939,9.39851641766436,4.03661066739764,5.85035371803112,7.99794704821014,13.7878355785851,7.28702091574627,11.1255181206306,10.7648654902647,3.50857675537478,4.62986318424279,7.72310673719233,9.70529016819279,9.15112692826091,1.69978429993855,1.11961161858926,2.62579950228405,5.72802370809068,0.949007980743406,3.04979200690273,3.24016022465404,3.3454127362315,5.02233896616208,4.5853877770839,7.43881101528023,12.0407733312654,2.33306951925227,13.0481255748254,6.76431526421028,2.54178128274764,5.12921320417003,5.83353565032143,4.77891346867605,5.06868376472335,7.04143431874524,8.07267186032491,10.5907937869968,5.55643477899814,10.657110231541,7.2682557744481,4.25722952109345,2.67048488628551,3.37794139742267,3.04345382634718,2.78153896693771,3.96644983415897,3.54454865218985,2.62512769865184,2.89585865288999,1.81487133246313,4.48306251402861,2.98256709085021,4.55819918508119,7.48210265930198,5.77163478772568,6.72853924571068,5.03653849092235,51.0020528244983,2.62755465631655,5.67770035228522,4.93047271881851,16.551879433167,5.64751842617067,9.66682996665071,11.4579102687879,13.2326950404639,8.90607275701835,9.06472676867641,12.8254275044043,10.8077088773813,9.06284817968409,8.28416498802912,0.726511433089237,1.19707462020309,3.92687293234509,4.86213434136588,3.35381060204772,4.59608771125035,5.11167473943715,5.15087643097235,6.4183841918363,6.31743029409494,6.08350319736575,6.41329560712659,4.12022632867483,6.6586158501064,5.45636955078326,5.23923060411381,6.72129090480162,6.17309505483856,4.53294490883637,5.88795680537589,4.4573002810104,5.6792257970988,6.19934093863034,6.24989591519013,4.51725025993587,6.00763716030903,5.12198324043763,5.26139422875686,7.4692262615224,5.61142271657738,6.16902094245706,5.22073756590486,6.95692773388472,6.50734732981057,5.20847849649082,4.74640098082097,7.48581147025307,7.30561583764214,5.16478496585877,12.1325280515734,14.3758058084661
|phase1_expression=3.52327463630547,4.53668029931169,5.0049916332849,11.4936400296595,11.520601788766,1.00727563147134,0,42.9980667060449,14.6420271037733,18.2570330531155,5.99262888789267,7.8974437405383,13.1824562047028,15.9979336426765,7.99463428357591,7.49158489342356,12.5921138063066,8.83294063003066,9.32378148519024,5.09267582157636,7.313722952992,0.794327609607082,0.783599367416806,2.3998863419011,2.06468352960453,2.8711598205751,3.87685796543167,1.72376986148711,3.99049180858385,2.52030129759931,1.77384408524244,2.54012269383853,3.69038872550742,0,0,0.664938581433969,1.02084678131185,0.418531630736908,0,0,0,0,0,7.93149953246137,5.67710814829281,6.60768307782054,6.25913075478431,1.52617609466313,2.41654801007919,3.4997381833371,2.37976916763116,1.43752564364972,13.9259563027921,42.7963663786693,7.39406358113421,7.20326420900652,10.601737277734,9.28209766099396,0.404632921719196,1.05798195854407,3.1691570175309,4.06613438482959,2.66788438833342,3.1496490104849,1.97773272513395,3.5524005747305,5.09320187881288,4.2264013585371,0.518448061542388,1.35005938331691,0.841299845405528,3.71346279724945,3.09215957332259,0.489963196859816,0.479227355091182,0.919218786610021,0,6.76742891851495,6.14426133024974,0.791317726381163,1.09785172322892,1.04182674111352,6.70039197603314,8.4414391504752,11.6126668310376,2.35702868378934,1.99320353118744,2.05039390407831,2.27178579999552,3.77857800533928,24.9283460283443,13.7667820317022,6.11974200336975,4.31762553310254,9.74664626171504,6.2723764193627,13.3422199125164,2.72688516124892,1.55871602761721,1.41335829804136,10.563256483251,0,0,0,3.030874574157,3.80039798212648,6.0662933401774,7.87868770061514,9.32176381129818,8.46120192669501,3.46970653532272,1.82679286987285,3.45923245884088,3.76806601381556,4.46837087115678,9.67632753238501,6.42706916109372,9.10975948595443,7.07688441559899,10.3530783966342,12.8088080707028,11.1521308221101,1.86391761218122,13.1751358655196,16.127396424636,4.34276993854605,0.239630249011841,1.19980546198682,0.381210681219194,6.74057877321702,12.3525162761029,2.89005009859588,14.0797699355744,12.5300574091862,7.89594569326328,9.24775199486219,2.34230536855727,19.6563013563947,78.5967778728728,256.107738613839,1.43132487258974,3.44853156650209,2.88099407688559,2.71268672104287,3.81004395247436,3.20284300712124,4.68508622798644,60.0191820114516,0.646703978798527,1.13463648100692,1.75951124163949,4.16471891612392,3.05851974148158,2.43776516565517,4.7329891373827,1.59227413454795,0,0.51469581422943,1.98914449576915,3.72826390563903,3.51789089971644,4.68161359798639,3.78791576936336,3.54175617145327,2.77680803197281,2.32533944750408,6.9751084363901,3.15266424391358,3.78487654801005,6.07419617092652,9.40398190731926,9.5029991826466,5.92785311285837,9.26024289446565,8.83217783969334,2.6755199218614,6.60837565967596,6.61126416658861,0.639864751605702,0.928946687441754,2.19074684247559,4.03367049246685,8.00560957841533,9.13083005340284,6.64340686162316,12.1877226495768,12.8180956488137,14.7227789310452,11.6978452271472,10.7858329038507,5.40345124686736,5.97423819763102,2.27601481143698,1.71372768914593,0,0.814605311381257,1.74557238450863,2.31448205638051,8.91635173452028,14.7610147979602,21.351826986427,10.3653617694312,8.00422093135302,6.84064933435986,8.64859578498093,11.2431056192427,10.3458661908136,10.1294407096015,10.9489116266011,11.2201493605816,9.72811360650212,13.1789478330279,20.1275489138296,22.3284568601102,19.3463357331028,19.1959947239805,12.9166137735777,11.5786445127208,4.98833613449833,2.08440552947533,1.30371981153621,1.69745085775188,1.17345124144251,1.50755631697634,1.90434912708811,2.73187107000918,4.25614889086716,2.21464689648775,3.6674596791222,3.93271955317771,5.52591941970866,3.7608755231193,3.01582567878545,1.63171705145613,23.1129208318947,14.9005843004556,9.79358598925531,3.7507739709505,2.13115428989678,31.3063949733423,1.57754109708128,1.56175497718655,2.80050417052639,2.62865677747807,2.00518806674155,2.26461224631066,0.809621403349789,2.04579100537918,2.76701444562566,7.71171159412337,6.81312408999689,1.42452482933804,2.60619134965722,7.75359577970917,38.4960901185892,2.91336763385978,3.62788268357701,3.96070667487386,3.2483208216885,6.7635732547664,18.0899805217755,18.1766864738753,8.55593708123331,12.9575070753685,28.4630243152497,36.0974401368654,5.44703369206061,3.06103859853227,3.88076051348264,7.28745919107414,7.27094957933322,6.0645397984704,6.58196082408484,3.34911444026059,4.22409074514679,15.8874053147865,63.953235435939,9.39851641766436,4.03661066739764,5.85035371803112,7.99794704821014,13.7878355785851,7.28702091574627,11.1255181206306,10.7648654902647,3.50857675537478,4.62986318424279,7.72310673719233,9.70529016819279,9.15112692826091,1.69978429993855,1.11961161858926,2.62579950228405,5.72802370809068,0.949007980743406,3.04979200690273,3.24016022465404,3.3454127362315,5.02233896616208,4.5853877770839,7.43881101528023,12.0407733312654,2.33306951925227,13.0481255748254,6.76431526421028,2.54178128274764,5.12921320417003,5.83353565032143,4.77891346867605,5.06868376472335,7.04143431874524,8.07267186032491,10.5907937869968,5.55643477899814,10.657110231541,7.2682557744481,4.25722952109345,2.67048488628551,3.37794139742267,3.04345382634718,2.78153896693771,3.96644983415897,3.54454865218985,2.62512769865184,2.89585865288999,1.81487133246313,4.48306251402861,2.98256709085021,4.55819918508119,7.48210265930198,5.77163478772568,6.72853924571068,5.03653849092235,51.0020528244983,2.62755465631655,5.67770035228522,4.93047271881851,16.551879433167,5.64751842617067,9.66682996665071,11.4579102687879,13.2326950404639,8.90607275701835,9.06472676867641,12.8254275044043,10.8077088773813,9.06284817968409,8.28416498802912,0.726511433089237,1.19707462020309,3.92687293234509,4.86213434136588,3.35381060204772,4.59608771125035,5.11167473943715,5.15087643097235,6.4183841918363,6.31743029409494,6.08350319736575,6.41329560712659,4.12022632867483,6.6586158501064,5.45636955078326,5.23923060411381,6.72129090480162,6.17309505483856,4.53294490883637,5.88795680537589,4.4573002810104,5.6792257970988,6.19934093863034,6.24989591519013,4.51725025993587,6.00763716030903,5.12198324043763,5.26139422875686,7.4692262615224,5.61142271657738,6.16902094245706,5.22073756590486,6.95692773388472,6.50734732981057,5.20847849649082,4.74640098082097,7.48581147025307,7.30561583764214,5.16478496585877,12.1325280515734,14.3758058084661
|short_description=p@chr4:15193249..15193320,+
|short_description=p@chr4:15193249..15193320,+
}}
}}

Latest revision as of 06:25, 5 August 2015

Short description:p@chr4:15193249..15193320, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:15193249..15193320, +
Coexpression cluster:MCL_coexpression_mm9:28
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:15193249..15193320+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E943.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D78.46
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I39.68
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H19.11
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F510.35
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I216.13
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.66
epididymis, adult.CNhs10490.58-23B278.60
eyeball, adult.CNhs10484.31-12G4256.11
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A260.02
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I69.50
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D29.26
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E912.19
intestine, neonate N06.CNhs11102.688-20B812.82
intestine, neonate N07.CNhs11095.720-20F214.72
intestine, neonate N10.CNhs11098.755-23A511.70
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I114.76
kidney, neonate N25.CNhs11122.1353-25F321.35
kidney, neonate N30.CNhs11203.1385-42H110.37
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D710.35
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H112.92
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H214.90
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G67.75
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G918.09
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E228.46
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G315.89
prostate, adult.CNhs10470.859-1F863.95
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H35.85
skin, neonate N06.CNhs11097.693-20I58.00
skin, neonate N10.CNhs11108.762-6C413.79
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G210.76
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H19.71
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I48.07
testis, neonate N10.CNhs11204.763-44D910.59
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E451.00
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.03e-0925
exocrine system2.03e-0925
liver7.20e-0822
epithelial sac7.20e-0822
digestive gland7.20e-0822
epithelium of foregut-midgut junction7.20e-0822
anatomical boundary7.20e-0822
hepatobiliary system7.20e-0822
foregut-midgut junction7.20e-0822
hepatic diverticulum7.20e-0822
liver primordium7.20e-0822
septum transversum7.20e-0822
liver bud7.20e-0822
digestive tract diverticulum4.59e-0723
sac4.59e-0723
adult organism4.75e-0751
epithelial tube8.02e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:15193249..15193320,%2B&oldid=3868555"