FFCP PHASE1:Mm9::chr2:107130747..107130817,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16492 | |EntrezGene=16492 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q61423 | |UniProt=Q61423 | ||
|association_with_transcript=0bp_to_ENSMUST00000037012_5end | |association_with_transcript=0bp_to_ENSMUST00000037012_5end | ||
|cluster_id=chr2:107130747..107130817,+ | |||
|description=CAGE_peak_1_at_Kcna4_5end | |description=CAGE_peak_1_at_Kcna4_5end | ||
|id=chr2:107130747..107130817,+ | |id=chr2:107130747..107130817,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.18e-13!33;CL:0000047!2.18e-13!33;CL:0000031!2.18e-13!33;CL:0000404!2.18e-13!33;CL:0000221!2.69e-13!44;CL:0000133!2.69e-13!44;CL:0002319!3.02e-13!43;CL:0000393!2.23e-10!39;CL:0000211!2.23e-10!39;CL:0000055!4.09e-10!50;CL:0000117!4.98e-10!23;CL:0000337!4.98e-10!23 | |ontology_enrichment_celltype=CL:0000540!2.18e-13!33;CL:0000047!2.18e-13!33;CL:0000031!2.18e-13!33;CL:0000404!2.18e-13!33;CL:0000221!2.69e-13!44;CL:0000133!2.69e-13!44;CL:0002319!3.02e-13!43;CL:0000393!2.23e-10!39;CL:0000211!2.23e-10!39;CL:0000055!4.09e-10!50;CL:0000117!4.98e-10!23;CL:0000337!4.98e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.78e-16,33;CL:0000047,8.78e-16,33;CL:0000031,8.78e-16,33;CL:0000404,8.78e-16,33;CL:0000221,2.11e-14,44;CL:0000133,2.11e-14,44;CL:0002319,2.53e-14,43;CL:0000117,1.57e-11,23;CL:0000337,1.57e-11,23;CL:0000393,1.60e-11,39;CL:0000211,1.60e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.11e-28!75;UBERON:0001016!8.11e-28!75;UBERON:0001017!9.89e-27!73;UBERON:0005743!9.89e-27!73;UBERON:0004121!2.13e-23!102;UBERON:0000924!2.13e-23!102;UBERON:0006601!2.13e-23!102;UBERON:0002346!1.65e-19!71;UBERON:0003075!1.65e-19!71;UBERON:0007284!1.65e-19!71;UBERON:0000033!3.65e-18!63;UBERON:0001049!4.05e-18!52;UBERON:0005068!4.05e-18!52;UBERON:0006241!4.05e-18!52;UBERON:0007135!4.05e-18!52;UBERON:0000955!1.18e-17!50;UBERON:0006238!1.18e-17!50;UBERON:0002616!6.30e-17!49;UBERON:0002020!3.02e-16!34;UBERON:0003056!4.09e-16!49;UBERON:0003080!1.87e-14!40;UBERON:0002780!7.50e-14!39;UBERON:0001890!7.50e-14!39;UBERON:0006240!7.50e-14!39;UBERON:0002791!1.55e-13!29;UBERON:0003528!1.55e-13!29;UBERON:0001893!1.55e-13!29;UBERON:0000025!1.79e-09!114;UBERON:0000956!2.33e-09!21;UBERON:0001869!2.33e-09!21;UBERON:0000203!2.33e-09!21;UBERON:0002619!8.29e-09!17;UBERON:0000153!3.14e-08!94;UBERON:0004111!4.27e-08!122;UBERON:0002021!5.68e-08!10;UBERON:0000411!5.68e-08!10;UBERON:0001950!5.68e-08!10;UBERON:0007811!9.08e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.97e-31,75;UBERON:0001017,1.92e-29,73;UBERON:0004121,6.93e-26,95;UBERON:0000924,6.93e-26,95;UBERON:0006601,6.93e-26,95;UBERON:0010314,3.96e-25,92;UBERON:0000073,4.52e-22,54;UBERON:0002346,6.21e-22,64;UBERON:0003075,6.21e-22,64;UBERON:0007284,6.21e-22,64;UBERON:0001049,4.09e-20,52;UBERON:0005068,4.09e-20,52;UBERON:0006241,4.09e-20,52;UBERON:0007135,4.09e-20,52;UBERON:0002020,2.49e-19,34;UBERON:0010371,3.15e-18,73;UBERON:0000955,4.56e-17,47;UBERON:0006238,4.56e-17,47;UBERON:0003056,1.34e-16,49;UBERON:0002616,3.24e-16,46;UBERON:0003528,6.41e-16,29;UBERON:0002791,6.41e-16,29;UBERON:0001893,6.41e-16,29;UBERON:0003080,1.08e-15,40;UBERON:0002780,5.85e-15,39;UBERON:0001890,5.85e-15,39;UBERON:0006240,5.85e-15,39;UBERON:0002619,9.71e-11,17;UBERON:0000956,1.10e-10,21;UBERON:0001869,1.10e-10,21;UBERON:0000203,1.10e-10,21;UBERON:0002021,1.11e-09,10;UBERON:0000411,1.11e-09,10;UBERON:0001950,1.11e-09,10;UBERON:0000025,8.37e-09,114;UBERON:0004111,7.99e-08,122;UBERON:0007100,3.63e-07,18;UBERON:0000948,3.63e-07,18;UBERON:0005498,3.63e-07,18;UBERON:0004140,3.63e-07,18;UBERON:0009881,3.63e-07,18;UBERON:0004141,3.63e-07,18;UBERON:0003084,3.63e-07,18;UBERON:0007005,3.63e-07,18;UBERON:0004139,3.63e-07,18;UBERON:0004291,3.63e-07,18 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41928572495591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.436050312760893,1.75748946187577,1.1665793944457,0.699932108126813,2.87505128729943,0,0,0,0,0.573066879877513,0,11.3297218081375,10.0508286061686,14.5781222806421,0.677689064138264,1.77858959222228,0,0,0.7104801149461,1.49800055259202,0.768436610643109,1.65903379693564,2.29510095163874,0.841299845405528,13.9968982357864,17.2277461942259,2.69479758272899,1.62937300731002,1.83843757322004,40.7428759697738,45.8397543725824,43.0098293117482,7.78129097608144,11.0700048758916,5.73004707612436,19.821992929098,36.0168070420275,26.2812986176113,22.3917724959987,25.4845308630394,11.3703661953433,4.7707501799906,21.7646093107542,0,0,0,0,0,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0.647067399789637,0,0,0,2.34224637609238,4.60782754989601,0.255457055208591,0,0,0,28.3104308475115,81.8926079045341,18.2198810563653,43.8037286884537,36.3115949409069,46.1289458922223,45.2653123959044,0.407357455401265,0.124406970610093,0,2.31486041475121,0.650602214813519,0.919608417733892,2.52086981727489,3.31550599238573,3.12967896096108,5.89323113310309,4.96619140166563,9.31332134660456,0,0.378212160335639,0.527853372491847,0.657587197282725,14.1804097105055,9.4028084960985,5.35033554660653,0.398068533636986,0,0,0,5.59239585845855,8.20841209933837,13.3245925481151,16.5721314909647,14.5605531493079,16.9693824176116,16.509910077279,19.047411499373,13.778310399326,18.5952630402233,15.9242440156722,10.2957388123237,10.5263990946239,7.90380415047782,4.56301823785264,49.628427861134,12.3485534855141,0,0,0.213288250535234,2.32236671860439,0.902072229254653,0.201683524623343,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.678980343100753,1.40814148973101,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,19.1055202085472,17.6989646754227,7.37707254195039,0,1.57754109708128,2.73307121007647,3.87762115919038,6.69112634267146,17.6010952525091,18.9661275628518,6.07216052512342,12.2747460322751,13.4397844501818,101.537535989291,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.377210159511796,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.258717367565509,0,0.886701168211368,1.24858172321449,2.79733335023606,0.913394847343798,0,0,0.441056796109924,0,0.968786560175433,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,10.5692422145991,0,1.03193433981611,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.316335993581135,1.21991680276109,2.16010681643603,0.836353184057875,1.31017538247707,1.07891477107857,0.495920734352016,2.09404753587224,0,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0.79472541912506,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8383734553435,34.9847179745454,31.5092532391668,27.6683623573337,39.0497036269266,48.3452094329408,45.226507515531,40.0785870869556,50.2988073972467,42.9741058754011,0.415149390336707,1.99512436700516,2.56100408631201,4.132814190161,2.30574478890781,3.49302666055027,3.55594764482584,4.12070114477788,3.53011130550997,2.52697211763797,4.30914809813408,3.39527414494937,3.46473577638565,3.52138338226781,4.02048282689293,2.38146845641537,4.05595140806994,3.47236596834669,2.06042950401653,3.67997300335993,5.82877729055206,4.61437096014278,2.14592570952589,3.92435324907287,3.57615645578256,4.14611578669215,5.48783918618318,4.73525480588117,2.98769050460896,2.80571135828869,3.44041552560105,3.44765688314472,3.27384834535751,2.47898945897546,3.47231899766054,6.99469618226249,3.27504251823572,4.29742108096597,1.53030665655075,1.54413993383661,0.695603506861264 | |phase1_expression=3.68342348341026,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41928572495591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.436050312760893,1.75748946187577,1.1665793944457,0.699932108126813,2.87505128729943,0,0,0,0,0.573066879877513,0,11.3297218081375,10.0508286061686,14.5781222806421,0.677689064138264,1.77858959222228,0,0,0.7104801149461,1.49800055259202,0.768436610643109,1.65903379693564,2.29510095163874,0.841299845405528,13.9968982357864,17.2277461942259,2.69479758272899,1.62937300731002,1.83843757322004,40.7428759697738,45.8397543725824,43.0098293117482,7.78129097608144,11.0700048758916,5.73004707612436,19.821992929098,36.0168070420275,26.2812986176113,22.3917724959987,25.4845308630394,11.3703661953433,4.7707501799906,21.7646093107542,0,0,0,0,0,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0.647067399789637,0,0,0,2.34224637609238,4.60782754989601,0.255457055208591,0,0,0,28.3104308475115,81.8926079045341,18.2198810563653,43.8037286884537,36.3115949409069,46.1289458922223,45.2653123959044,0.407357455401265,0.124406970610093,0,2.31486041475121,0.650602214813519,0.919608417733892,2.52086981727489,3.31550599238573,3.12967896096108,5.89323113310309,4.96619140166563,9.31332134660456,0,0.378212160335639,0.527853372491847,0.657587197282725,14.1804097105055,9.4028084960985,5.35033554660653,0.398068533636986,0,0,0,5.59239585845855,8.20841209933837,13.3245925481151,16.5721314909647,14.5605531493079,16.9693824176116,16.509910077279,19.047411499373,13.778310399326,18.5952630402233,15.9242440156722,10.2957388123237,10.5263990946239,7.90380415047782,4.56301823785264,49.628427861134,12.3485534855141,0,0,0.213288250535234,2.32236671860439,0.902072229254653,0.201683524623343,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.678980343100753,1.40814148973101,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,19.1055202085472,17.6989646754227,7.37707254195039,0,1.57754109708128,2.73307121007647,3.87762115919038,6.69112634267146,17.6010952525091,18.9661275628518,6.07216052512342,12.2747460322751,13.4397844501818,101.537535989291,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.377210159511796,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.258717367565509,0,0.886701168211368,1.24858172321449,2.79733335023606,0.913394847343798,0,0,0.441056796109924,0,0.968786560175433,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,10.5692422145991,0,1.03193433981611,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0.316335993581135,1.21991680276109,2.16010681643603,0.836353184057875,1.31017538247707,1.07891477107857,0.495920734352016,2.09404753587224,0,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.419437377702843,0,0,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0.79472541912506,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8383734553435,34.9847179745454,31.5092532391668,27.6683623573337,39.0497036269266,48.3452094329408,45.226507515531,40.0785870869556,50.2988073972467,42.9741058754011,0.415149390336707,1.99512436700516,2.56100408631201,4.132814190161,2.30574478890781,3.49302666055027,3.55594764482584,4.12070114477788,3.53011130550997,2.52697211763797,4.30914809813408,3.39527414494937,3.46473577638565,3.52138338226781,4.02048282689293,2.38146845641537,4.05595140806994,3.47236596834669,2.06042950401653,3.67997300335993,5.82877729055206,4.61437096014278,2.14592570952589,3.92435324907287,3.57615645578256,4.14611578669215,5.48783918618318,4.73525480588117,2.98769050460896,2.80571135828869,3.44041552560105,3.44765688314472,3.27384834535751,2.47898945897546,3.47231899766054,6.99469618226249,3.27504251823572,4.29742108096597,1.53030665655075,1.54413993383661,0.695603506861264 | ||
|short_description=p1@Kcna4 | |short_description=p1@Kcna4 | ||
}} | }} |
Latest revision as of 22:37, 1 October 2015
Short description: | p1@Kcna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcna4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000037012_5end |
EntrezGene: | Kcna4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.78e-16 | 33 |
neuronal stem cell | 8.78e-16 | 33 |
neuroblast | 8.78e-16 | 33 |
electrically signaling cell | 8.78e-16 | 33 |
ectodermal cell | 2.11e-14 | 44 |
neurectodermal cell | 2.11e-14 | 44 |
neural cell | 2.53e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-11 | 23 |
electrically responsive cell | 1.60e-11 | 39 |
electrically active cell | 1.60e-11 | 39 |